RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-206ENST00000413725 TCP10Q12799 353 aa15.8■□□□□ 0.12
SF1-206ENST00000413725 NMIQ13287 307 aaPredicted RBP15.8■□□□□ 0.12
SF1-206ENST00000413725 MCMDC2Q4G0Z9 681 aa15.8■□□□□ 0.12
SF1-206ENST00000413725 FAM151AQ8WW52 585 aa15.8■□□□□ 0.12
SF1-206ENST00000413725 RUFY2Q8WXA3 655 aa15.8■□□□□ 0.12
SF1-206ENST00000413725 DDRGK1Q96HY6 314 aa15.8■□□□□ 0.12
SF1-206ENST00000413725 FAM227BQ96M60 508 aa15.8■□□□□ 0.12
SF1-206ENST00000413725 FAM198AQ9UFP1 575 aa15.8■□□□□ 0.12
SF1-206ENST00000413725 COL2A1P02458 1487 aaPredicted RBP15.79■□□□□ 0.12
SF1-206ENST00000413725 FLT1P17948 1338 aa15.79■□□□□ 0.12
SF1-206ENST00000413725 A0A0D9SFI3 127 aa15.79■□□□□ 0.12
SF1-206ENST00000413725 ITGBL1O95965 494 aaPredicted RBP15.79■□□□□ 0.12
SF1-206ENST00000413725 NF2P35240 595 aa15.79■□□□□ 0.12
SF1-206ENST00000413725 CWC27Q6UX04 472 aaKnown RBP15.79■□□□□ 0.12
SF1-206ENST00000413725 MAPKAPK5Q8IW41 473 aa15.79■□□□□ 0.12
SF1-206ENST00000413725 ZSCAN29Q8IWY8 852 aaPredicted RBP15.79■□□□□ 0.12
SF1-206ENST00000413725 CDCA5Q96FF9 252 aa15.79■□□□□ 0.12
SF1-206ENST00000413725 STRBPQ96SI9 672 aaKnown RBP15.79■□□□□ 0.12
SF1-206ENST00000413725 SEC62Q99442 399 aaKnown RBP15.79■□□□□ 0.12
SF1-206ENST00000413725 DDX4Q9NQI0 724 aaKnown RBP15.79■□□□□ 0.12
SF1-206ENST00000413725 SLC4A4Q9Y6R1 1079 aa15.79■□□□□ 0.12
SF1-206ENST00000413725 SIPA1L1O43166 1804 aa15.79■□□□□ 0.12
SF1-206ENST00000413725 LAMA4Q16363 1823 aa15.78■□□□□ 0.12
SF1-206ENST00000413725 ATAD5Q96QE3 1844 aa15.78■□□□□ 0.12
SF1-206ENST00000413725 PAPPA2Q9BXP8 1791 aa15.78■□□□□ 0.12
SF1-206ENST00000413725 RAD50Q92878 1312 aa15.78■□□□□ 0.12
SF1-206ENST00000413725 TRAF5O00463 557 aa15.78■□□□□ 0.12
SF1-206ENST00000413725 CHMLP26374 656 aa15.78■□□□□ 0.12
SF1-206ENST00000413725 SUPT20HL1Q3ZLR7 823 aa15.78■□□□□ 0.12
SF1-206ENST00000413725 CASC1Q6TDU7 716 aa15.78■□□□□ 0.12
SF1-206ENST00000413725 HOOK2Q96ED9 719 aa15.78■□□□□ 0.12
SF1-206ENST00000413725 TMEM39BQ9GZU3 492 aa15.78■□□□□ 0.12
SF1-206ENST00000413725 OSBPL5Q9H0X9 879 aaPredicted RBP15.78■□□□□ 0.12
SF1-206ENST00000413725 ATP8A2Q9NTI2 1148 aa15.78■□□□□ 0.12
SF1-206ENST00000413725 CCDC171Q6TFL3 1326 aa15.77■□□□□ 0.12
SF1-206ENST00000413725 PASKQ96RG2 1323 aa15.77■□□□□ 0.12
SF1-206ENST00000413725 OTOFQ9HC10 1997 aa15.77■□□□□ 0.12
SF1-206ENST00000413725 CDC45O75419 566 aa15.77■□□□□ 0.12
SF1-206ENST00000413725 SDR42E1Q8WUS8 393 aa15.77■□□□□ 0.12
SF1-206ENST00000413725 ZNF408Q9H9D4 720 aa15.77■□□□□ 0.12
SF1-206ENST00000413725 ATRNL1Q5VV63 1379 aa15.76■□□□□ 0.11
SF1-206ENST00000413725 APPP05067 770 aa15.76■□□□□ 0.11
SF1-206ENST00000413725 PRAMEF18Q5VWM3 479 aa15.76■□□□□ 0.11
SF1-206ENST00000413725 CCDC129Q6ZRS4 1044 aa15.76■□□□□ 0.11
SF1-206ENST00000413725 AMOTL1Q8IY63 956 aa15.76■□□□□ 0.11
SF1-206ENST00000413725 TEPSINQ96N21 525 aa15.76■□□□□ 0.11
SF1-206ENST00000413725 CSRNP1Q96S65 589 aa15.76■□□□□ 0.11
SF1-206ENST00000413725 NACAP1Q9BZK3 213 aa15.76■□□□□ 0.11
SF1-206ENST00000413725 DHX36Q9H2U1 1008 aaKnown RBP15.76■□□□□ 0.11
SF1-206ENST00000413725 DCP1AQ9NPI6 582 aaPredicted RBP15.76■□□□□ 0.11
SF1-206ENST00000413725 PATL2C9JE40 543 aaKnown RBP15.75■□□□□ 0.11
SF1-206ENST00000413725 PRKAB2O43741 272 aa15.75■□□□□ 0.11
SF1-206ENST00000413725 CELF2O95319 508 aaKnown RBP15.75■□□□□ 0.11
SF1-206ENST00000413725 HLA-DOAP06340 250 aa15.75■□□□□ 0.11
SF1-206ENST00000413725 NBPF12Q5TAG4 269 aaPredicted RBP15.75■□□□□ 0.11
SF1-206ENST00000413725 GIMAP6Q6P9H5 292 aa15.75■□□□□ 0.11
SF1-206ENST00000413725 DLK2Q6UY11 383 aa15.75■□□□□ 0.11
SF1-206ENST00000413725 ZFPM1Q8IX07 1006 aa15.75■□□□□ 0.11
SF1-206ENST00000413725 CNKSR2Q8WXI2 1034 aa15.75■□□□□ 0.11
SF1-206ENST00000413725 SAP30BPQ9UHR5 308 aaKnown RBP15.75■□□□□ 0.11
SF1-206ENST00000413725 DOCK1Q14185 1865 aa15.74■□□□□ 0.11
SF1-206ENST00000413725 DDTLA6NHG4 134 aaPredicted RBP15.74■□□□□ 0.11
SF1-206ENST00000413725 POLR3DP05423 398 aaPredicted RBP15.74■□□□□ 0.11
SF1-206ENST00000413725 TDO2P48775 406 aa15.74■□□□□ 0.11
SF1-206ENST00000413725 FMR1Q06787 632 aaKnown RBP eCLIP15.74■□□□□ 0.11
SF1-206ENST00000413725 DCAF15Q66K64 600 aa15.74■□□□□ 0.11
SF1-206ENST00000413725 TTC6Q86TZ1 520 aa15.74■□□□□ 0.11
SF1-206ENST00000413725 ZNF589Q86UQ0 364 aaPredicted RBP15.74■□□□□ 0.11
SF1-206ENST00000413725 MCM9Q9NXL9 1143 aa15.74■□□□□ 0.11
SF1-206ENST00000413725 SSC5DA1L4H1 1573 aa15.74■□□□□ 0.11
SF1-206ENST00000413725 GSG1L2A8MUP6 293 aa15.73■□□□□ 0.11
SF1-206ENST00000413725 PPP1R12BO60237 982 aaPredicted RBP15.73■□□□□ 0.11
SF1-206ENST00000413725 TTLL12Q14166 644 aaPredicted RBP15.73■□□□□ 0.11
SF1-206ENST00000413725 SH3BP5LQ7L8J4 393 aa15.73■□□□□ 0.11
SF1-206ENST00000413725 CDAN1Q8IWY9 1227 aa15.73■□□□□ 0.11
SF1-206ENST00000413725 C2orf69Q8N8R5 385 aa15.73■□□□□ 0.11
SF1-206ENST00000413725 NAPBQ9H115 298 aa15.73■□□□□ 0.11
SF1-206ENST00000413725 PI4KBQ9UBF8 816 aa15.73■□□□□ 0.11
SF1-206ENST00000413725 ARPP21Q9UBL0 812 aaPredicted RBP15.73■□□□□ 0.11
SF1-206ENST00000413725 MKRN1Q9UHC7 482 aaKnown RBP15.73■□□□□ 0.11
SF1-206ENST00000413725 PALD1Q9ULE6 856 aa15.73■□□□□ 0.11
SF1-206ENST00000413725 SGSM2O43147 1006 aa15.72■□□□□ 0.11
SF1-206ENST00000413725 FKBP1BP68106 108 aa15.72■□□□□ 0.11
SF1-206ENST00000413725 ARMC9Q7Z3E5 817 aa15.72■□□□□ 0.11
SF1-206ENST00000413725 IFNL3Q8IZI9 196 aa15.72■□□□□ 0.11
SF1-206ENST00000413725 CRACR2BQ8N4Y2 399 aaPredicted RBP15.72■□□□□ 0.11
SF1-206ENST00000413725 ESYT1Q9BSJ8 1104 aa15.72■□□□□ 0.11
SF1-206ENST00000413725 TRIM34Q9BYJ4 488 aa15.72■□□□□ 0.11
SF1-206ENST00000413725 GBA2Q9HCG7 927 aaPredicted RBP15.72■□□□□ 0.11
SF1-206ENST00000413725 TMEM88BA6NKF7 163 aa15.71■□□□□ 0.11
SF1-206ENST00000413725 HSPD1P10809 573 aaKnown RBP15.71■□□□□ 0.11
SF1-206ENST00000413725 APLP1P51693 650 aa15.71■□□□□ 0.11
SF1-206ENST00000413725 C1QTNF8P60827 252 aa15.71■□□□□ 0.11
SF1-206ENST00000413725 SLC4A8Q2Y0W8 1093 aa15.71■□□□□ 0.11
SF1-206ENST00000413725 VPS53Q5VIR6 699 aa15.71■□□□□ 0.11
SF1-206ENST00000413725 KIAA1211Q6ZU35 1233 aa15.71■□□□□ 0.11
SF1-206ENST00000413725 FOXP4Q8IVH2 680 aaPredicted RBP15.71■□□□□ 0.11
SF1-206ENST00000413725 ZNF341Q9BYN7 854 aa15.71■□□□□ 0.11
SF1-206ENST00000413725 EPB41L4AQ9HCS5 686 aaPredicted RBP15.71■□□□□ 0.11
SF1-206ENST00000413725 HERC5Q9UII4 1024 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms