RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 GJD3Q8N144 294 aa5.2□□□□□ -1.58
HMGB3P2-201ENST00000411913 ASB11Q8WXH4 323 aa5.2□□□□□ -1.58
HMGB3P2-201ENST00000411913 DISC1Q9NRI5 854 aa5.2□□□□□ -1.58
HMGB3P2-201ENST00000411913 CCDC87Q9NVE4 849 aa5.2□□□□□ -1.58
HMGB3P2-201ENST00000411913 SNX11Q9Y5W9 270 aa5.2□□□□□ -1.58
HMGB3P2-201ENST00000411913 KIAA0319Q5VV43 1072 aa5.19□□□□□ -1.58
HMGB3P2-201ENST00000411913 C1QL4Q86Z23 238 aa5.19□□□□□ -1.58
HMGB3P2-201ENST00000411913 TOP6BLQ8N6T0 577 aa5.19□□□□□ -1.58
HMGB3P2-201ENST00000411913 LMCD1Q9NZU5 365 aa5.19□□□□□ -1.58
HMGB3P2-201ENST00000411913 MTMR7Q9Y216 660 aa5.19□□□□□ -1.58
HMGB3P2-201ENST00000411913 NFIBO00712 420 aa5.18□□□□□ -1.58
HMGB3P2-201ENST00000411913 NEFLP07196 543 aa5.18□□□□□ -1.58
HMGB3P2-201ENST00000411913 ITPKAP23677 461 aa5.18□□□□□ -1.58
HMGB3P2-201ENST00000411913 ZNF157P51786 506 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P2-201ENST00000411913 FKBP4Q02790 459 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB3P2-201ENST00000411913 SF3B2Q13435 895 aaKnown RBP5.18□□□□□ -1.58
HMGB3P2-201ENST00000411913 ECM1Q16610 540 aa5.18□□□□□ -1.58
HMGB3P2-201ENST00000411913 FYB2Q5VWT5 728 aa5.18□□□□□ -1.58
HMGB3P2-201ENST00000411913 PRR23BQ6ZRT6 265 aa5.18□□□□□ -1.58
HMGB3P2-201ENST00000411913 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB3P2-201ENST00000411913 TNKS2Q9H2K2 1166 aa5.18□□□□□ -1.58
HMGB3P2-201ENST00000411913 CTNND2Q9UQB3 1225 aa5.18□□□□□ -1.58
HMGB3P2-201ENST00000411913 ZNF862O60290 1169 aa5.17□□□□□ -1.58
HMGB3P2-201ENST00000411913 GLI1P08151 1106 aa5.17□□□□□ -1.58
HMGB3P2-201ENST00000411913 TMEM67Q5HYA8 995 aa5.17□□□□□ -1.58
HMGB3P2-201ENST00000411913 USPL1Q5W0Q7 1092 aa5.17□□□□□ -1.58
HMGB3P2-201ENST00000411913 KIRREL1Q96J84 757 aa5.17□□□□□ -1.58
HMGB3P2-201ENST00000411913 GTF2IRD1Q9UHL9 959 aa5.17□□□□□ -1.58
HMGB3P2-201ENST00000411913 ABL1P00519 1130 aa5.16□□□□□ -1.58
HMGB3P2-201ENST00000411913 GSTP1P09211 210 aaKnown RBP5.16□□□□□ -1.58
HMGB3P2-201ENST00000411913 C1QTNF9P0C862 333 aa5.16□□□□□ -1.58
HMGB3P2-201ENST00000411913 BUD31P41223 144 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P2-201ENST00000411913 PTPN12Q05209 780 aaKnown RBP5.16□□□□□ -1.58
HMGB3P2-201ENST00000411913 KIF4BQ2VIQ3 1234 aa5.16□□□□□ -1.58
HMGB3P2-201ENST00000411913 RPS26P11Q5JNZ5 115 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P2-201ENST00000411913 TTLL10Q6ZVT0 673 aa5.16□□□□□ -1.58
HMGB3P2-201ENST00000411913 CYFIP1Q7L576 1253 aa5.16□□□□□ -1.58
HMGB3P2-201ENST00000411913 KCNB2Q92953 911 aa5.16□□□□□ -1.58
HMGB3P2-201ENST00000411913 KRT82Q9NSB4 513 aa5.16□□□□□ -1.58
HMGB3P2-201ENST00000411913 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P2-201ENST00000411913 SSFA2P28290 1259 aa5.15□□□□□ -1.59
HMGB3P2-201ENST00000411913 FBXO15Q8NCQ5 510 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P2-201ENST00000411913 ISL2Q96A47 359 aa5.15□□□□□ -1.59
HMGB3P2-201ENST00000411913 CCDC97Q96F63 343 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P2-201ENST00000411913 HEXIM2Q96MH2 286 aaKnown RBP5.15□□□□□ -1.59
HMGB3P2-201ENST00000411913 NPHS2Q9NP85 383 aa5.15□□□□□ -1.59
HMGB3P2-201ENST00000411913 ANO2Q9NQ90 1003 aa5.15□□□□□ -1.59
HMGB3P2-201ENST00000411913 TMEM238LA0A1B0GVL6 79 aa5.14□□□□□ -1.59
HMGB3P2-201ENST00000411913 GNAT3A8MTJ3 354 aa5.14□□□□□ -1.59
HMGB3P2-201ENST00000411913 NPIPB6E9PJ23 425 aa5.14□□□□□ -1.59
HMGB3P2-201ENST00000411913 GADD45BO75293 160 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P2-201ENST00000411913 NEFMP07197 916 aa5.14□□□□□ -1.59
HMGB3P2-201ENST00000411913 TMEM253P0C7T8 217 aa5.14□□□□□ -1.59
HMGB3P2-201ENST00000411913 DIRC2Q96SL1 478 aa5.14□□□□□ -1.59
HMGB3P2-201ENST00000411913 ABCB6Q9NP58 842 aa5.14□□□□□ -1.59
HMGB3P2-201ENST00000411913 BRPF3Q9ULD4 1205 aa5.14□□□□□ -1.59
HMGB3P2-201ENST00000411913 PCDHGC5Q9Y5F6 944 aa5.14□□□□□ -1.59
HMGB3P2-201ENST00000411913 IGF2BP3O00425 579 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMGB3P2-201ENST00000411913 CPNE3O75131 537 aaKnown RBP5.13□□□□□ -1.59
HMGB3P2-201ENST00000411913 PPP2R3AQ06190 1150 aa5.13□□□□□ -1.59
HMGB3P2-201ENST00000411913 FAAP100Q0VG06 881 aa5.13□□□□□ -1.59
HMGB3P2-201ENST00000411913 ZNF211Q13398 564 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P2-201ENST00000411913 SPACA3Q8IXA5 215 aa5.13□□□□□ -1.59
HMGB3P2-201ENST00000411913 NSUN3Q9H649 340 aaKnown RBP5.13□□□□□ -1.59
HMGB3P2-201ENST00000411913 RAPGEFL1Q9UHV5 662 aa5.13□□□□□ -1.59
HMGB3P2-201ENST00000411913 GPN3Q9UHW5 284 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P2-201ENST00000411913 INHBBP09529 407 aa5.12□□□□□ -1.59
HMGB3P2-201ENST00000411913 CLCN7P51798 805 aa5.12□□□□□ -1.59
HMGB3P2-201ENST00000411913 CTSWP56202 376 aa5.12□□□□□ -1.59
HMGB3P2-201ENST00000411913 CIAPIN1Q6FI81 312 aa5.12□□□□□ -1.59
HMGB3P2-201ENST00000411913 PRPF40BQ6NWY9 871 aaKnown RBP5.12□□□□□ -1.59
HMGB3P2-201ENST00000411913 FAM214BQ7L5A3 538 aa5.12□□□□□ -1.59
HMGB3P2-201ENST00000411913 RNF214Q8ND24 703 aa5.12□□□□□ -1.59
HMGB3P2-201ENST00000411913 CARS2Q9HA77 564 aaKnown RBP5.12□□□□□ -1.59
HMGB3P2-201ENST00000411913 PRDM10Q9NQV6 1147 aa5.12□□□□□ -1.59
HMGB3P2-201ENST00000411913 TRAK1Q9UPV9 953 aa5.12□□□□□ -1.59
HMGB3P2-201ENST00000411913 KRT1P04264 644 aa5.11□□□□□ -1.59
HMGB3P2-201ENST00000411913 ERVK-24P63145 666 aa5.11□□□□□ -1.59
HMGB3P2-201ENST00000411913 ORC1Q13415 861 aa5.11□□□□□ -1.59
HMGB3P2-201ENST00000411913 NKPD1Q17RQ9 610 aa5.11□□□□□ -1.59
HMGB3P2-201ENST00000411913 ZC3H12AQ5D1E8 599 aaKnown RBP5.11□□□□□ -1.59
HMGB3P2-201ENST00000411913 AMIGO3Q86WK7 504 aa5.11□□□□□ -1.59
HMGB3P2-201ENST00000411913 DCP1AQ9NPI6 582 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P2-201ENST00000411913 PICK1Q9NRD5 415 aa5.11□□□□□ -1.59
HMGB3P2-201ENST00000411913 TMEM39AQ9NV64 488 aa5.11□□□□□ -1.59
HMGB3P2-201ENST00000411913 PITPNM2Q9BZ72 1349 aa5.11□□□□□ -1.59
HMGB3P2-201ENST00000411913 TCAF2A6NFQ2 919 aa5.1□□□□□ -1.59
HMGB3P2-201ENST00000411913 GDNFP39905 211 aa5.1□□□□□ -1.59
HMGB3P2-201ENST00000411913 KCNA10Q16322 511 aa5.1□□□□□ -1.59
HMGB3P2-201ENST00000411913 DTHD1Q6ZMT9 781 aa5.1□□□□□ -1.59
HMGB3P2-201ENST00000411913 ATG14Q6ZNE5 492 aa5.1□□□□□ -1.59
HMGB3P2-201ENST00000411913 ACSBG1Q96GR2 724 aa5.1□□□□□ -1.59
HMGB3P2-201ENST00000411913 PPP4R2Q9NY27 417 aa5.1□□□□□ -1.59
HMGB3P2-201ENST00000411913 SERPINA10Q9UK55 444 aa5.1□□□□□ -1.59
HMGB3P2-201ENST00000411913 FAM155AB1AL88 458 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P2-201ENST00000411913 PDE3BQ13370 1112 aa5.09□□□□□ -1.59
HMGB3P2-201ENST00000411913 MAP1SQ66K74 1059 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P2-201ENST00000411913 SULF2Q8IWU5 870 aa5.09□□□□□ -1.59
HMGB3P2-201ENST00000411913 CCDC74AQ96AQ1 378 aa5.09□□□□□ -1.59
HMGB3P2-201ENST00000411913 FOXQ1Q9C009 403 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms