RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 ANO1Q5XXA6 986 aa27.6■■■□□ 2.01
PMS1-205ENST00000409985 APOA5Q6Q788 366 aa27.6■■■□□ 2.01
PMS1-205ENST00000409985 C11orf57Q6ZUT1 292 aaPredicted RBP27.6■■■□□ 2.01
PMS1-205ENST00000409985 IGDCC4Q8TDY8 1250 aa27.6■■■□□ 2.01
PMS1-205ENST00000409985 TIGD1Q96MW7 591 aa27.6■■■□□ 2.01
PMS1-205ENST00000409985 STK36Q9NRP7 1315 aa27.6■■■□□ 2.01
PMS1-205ENST00000409985 CYB5R4Q7L1T6 521 aa27.59■■■□□ 2.01
PMS1-205ENST00000409985 UTP14AQ9BVJ6 771 aaKnown RBP27.59■■■□□ 2.01
PMS1-205ENST00000409985 CLIP2Q9UDT6 1046 aa27.59■■■□□ 2.01
PMS1-205ENST00000409985 CLIC4Q9Y696 253 aa27.59■■■□□ 2.01
PMS1-205ENST00000409985 BECN2A8MW95 431 aa27.59■■■□□ 2.01
PMS1-205ENST00000409985 R3HDM1Q15032 1099 aaKnown RBP27.59■■■□□ 2.01
PMS1-205ENST00000409985 CLEC4GQ6UXB4 293 aa27.59■■■□□ 2.01
PMS1-205ENST00000409985 MYO5AQ9Y4I1 1855 aaKnown RBP27.58■■■□□ 2.01
PMS1-205ENST00000409985 PPP6R2O75170 966 aa27.58■■■□□ 2.01
PMS1-205ENST00000409985 APPP05067 770 aa27.58■■■□□ 2.01
PMS1-205ENST00000409985 CHAF1AQ13111 956 aaPredicted RBP27.58■■■□□ 2.01
PMS1-205ENST00000409985 SLC39A14Q15043 492 aa27.58■■■□□ 2.01
PMS1-205ENST00000409985 SDF4Q9BRK5 362 aa27.58■■■□□ 2.01
PMS1-205ENST00000409985 KIAA1468Q9P260 1216 aa27.58■■■□□ 2.01
PMS1-205ENST00000409985 WWC3Q9ULE0 1092 aa27.58■■■□□ 2.01
PMS1-205ENST00000409985 DHX40Q8IX18 779 aaKnown RBP27.57■■■□□ 2
PMS1-205ENST00000409985 JMYQ8N9B5 988 aa27.57■■■□□ 2
PMS1-205ENST00000409985 FLAD1Q8NFF5 587 aa27.57■■■□□ 2
PMS1-205ENST00000409985 KRT23Q9C075 422 aa27.57■■■□□ 2
PMS1-205ENST00000409985 RCAN1P53805 252 aa27.57■■■□□ 2
PMS1-205ENST00000409985 CCDC152Q4G0S7 254 aa27.57■■■□□ 2
PMS1-205ENST00000409985 GLIPR1L2Q4G1C9 344 aa27.57■■■□□ 2
PMS1-205ENST00000409985 IFNL3Q8IZI9 196 aa27.57■■■□□ 2
PMS1-205ENST00000409985 MPHOSPH8Q99549 860 aa27.57■■■□□ 2
PMS1-205ENST00000409985 ALG1Q9BT22 464 aa27.57■■■□□ 2
PMS1-205ENST00000409985 FAM237AA0A1B0GTK4 181 aa27.56■■■□□ 2
PMS1-205ENST00000409985 ZBTB43O43298 467 aa27.56■■■□□ 2
PMS1-205ENST00000409985 NDUFA8P51970 172 aa27.56■■■□□ 2
PMS1-205ENST00000409985 DHX8Q14562 1220 aaKnown RBP27.56■■■□□ 2
PMS1-205ENST00000409985 AXDND1Q5T1B0 1012 aaPredicted RBP27.56■■■□□ 2
PMS1-205ENST00000409985 SUSD4Q5VX71 490 aa27.56■■■□□ 2
PMS1-205ENST00000409985 BICDL1Q6ZP65 573 aa27.56■■■□□ 2
PMS1-205ENST00000409985 LY9Q9HBG7 655 aa27.56■■■□□ 2
PMS1-205ENST00000409985 POLR3DP05423 398 aaPredicted RBP27.55■■■□□ 2
PMS1-205ENST00000409985 NTRK3Q16288 839 aa27.55■■■□□ 2
PMS1-205ENST00000409985 OTUD7BQ6GQQ9 843 aa27.55■■■□□ 2
PMS1-205ENST00000409985 NIP7Q9Y221 180 aaKnown RBP eCLIP27.55■■■□□ 2
PMS1-205ENST00000409985 CASZ1Q86V15 1759 aa27.55■■■□□ 2
PMS1-205ENST00000409985 PSDA5PKW4 1024 aaPredicted RBP27.55■■■□□ 2
PMS1-205ENST00000409985 U2AF2P26368 475 aaKnown RBP eCLIP27.55■■■□□ 23e-7■■■■■ 27.8
PMS1-205ENST00000409985 NFIXQ14938 502 aa27.55■■■□□ 2
PMS1-205ENST00000409985 C17orf53Q8N3J3 647 aaPredicted RBP27.55■■■□□ 2
PMS1-205ENST00000409985 WASF1Q92558 559 aa27.55■■■□□ 2
PMS1-205ENST00000409985 NAPBQ9H115 298 aa27.55■■■□□ 2
PMS1-205ENST00000409985 A0A1B0GVL5 298 aa27.54■■■□□ 2
PMS1-205ENST00000409985 KIF28PB7ZC32 967 aa27.54■■■□□ 2
PMS1-205ENST00000409985 RGL2O15211 777 aa27.54■■■□□ 2
PMS1-205ENST00000409985 RASGRF1Q13972 1273 aa27.54■■■□□ 2
PMS1-205ENST00000409985 MSL1Q68DK7 614 aa27.54■■■□□ 2
PMS1-205ENST00000409985 B4E1Z4 1266 aa27.53■■■□□ 2
PMS1-205ENST00000409985 NACAP1Q9BZK3 213 aa27.53■■■□□ 2
PMS1-205ENST00000409985 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.53■■■□□ 2
PMS1-205ENST00000409985 ZNF652Q9Y2D9 606 aa27.53■■■□□ 2
PMS1-205ENST00000409985 CHD4Q14839 1912 aa27.53■■■□□ 2
PMS1-205ENST00000409985 TM4SF1P30408 202 aa27.53■■■□□ 2
PMS1-205ENST00000409985 IARSP41252 1262 aaKnown RBP27.53■■■□□ 2
PMS1-205ENST00000409985 ZRSR1Q15695 479 aaKnown RBP27.53■■■□□ 2
PMS1-205ENST00000409985 AKNAD1Q5T1N1 836 aa27.53■■■□□ 2
PMS1-205ENST00000409985 KRT40Q6A162 431 aa27.53■■■□□ 2
PMS1-205ENST00000409985 TMTC2Q8N394 836 aa27.53■■■□□ 2
PMS1-205ENST00000409985 STAG1Q8WVM7 1258 aa27.53■■■□□ 2
PMS1-205ENST00000409985 COL24A1Q17RW2 1714 aa27.52■■■□□ 2
PMS1-205ENST00000409985 NEDD4P46934 1319 aa27.52■■■□□ 2
PMS1-205ENST00000409985 ZNF202O95125 648 aa27.52■■■□□ 2
PMS1-205ENST00000409985 IGHMBP2P38935 993 aaKnown RBP27.52■■■□□ 2
PMS1-205ENST00000409985 TMEM67Q5HYA8 995 aa27.52■■■□□ 2
PMS1-205ENST00000409985 MAGEB6Q8N7X4 407 aa27.52■■■□□ 2
PMS1-205ENST00000409985 EPB41L4AQ9HCS5 686 aaPredicted RBP27.52■■■□□ 2
PMS1-205ENST00000409985 PPFIA3O75145 1194 aa27.51■■□□□ 1.99
PMS1-205ENST00000409985 DDR1Q08345 913 aa27.51■■□□□ 1.99
PMS1-205ENST00000409985 TRIM29Q14134 588 aa27.51■■□□□ 1.99
PMS1-205ENST00000409985 VPS37DQ86XT2 251 aa27.51■■□□□ 1.99
PMS1-205ENST00000409985 ELOA2Q8IYF1 753 aaPredicted RBP27.51■■□□□ 1.99
PMS1-205ENST00000409985 IMPACTQ9P2X3 320 aa27.51■■□□□ 1.99
PMS1-205ENST00000409985 NRBP1Q9UHY1 535 aa27.51■■□□□ 1.99
PMS1-205ENST00000409985 FAM177BA6PVY3 158 aa27.51■■□□□ 1.99
PMS1-205ENST00000409985 GSG1L2A8MUP6 293 aa27.51■■□□□ 1.99
PMS1-205ENST00000409985 MBD4O95243 580 aa27.51■■□□□ 1.99
PMS1-205ENST00000409985 SLC3A2P08195 630 aaKnown RBP27.51■■□□□ 1.99
PMS1-205ENST00000409985 IFNAR1P17181 557 aa27.51■■□□□ 1.99
PMS1-205ENST00000409985 NLRP12P59046 1061 aa27.51■■□□□ 1.99
PMS1-205ENST00000409985 CDC5LQ99459 802 aaKnown RBP27.51■■□□□ 1.99
PMS1-205ENST00000409985 KCND1Q9NSA2 647 aa27.51■■□□□ 1.99
PMS1-205ENST00000409985 FAM217BQ9NTX9 383 aaPredicted RBP27.51■■□□□ 1.99
PMS1-205ENST00000409985 HPSEQ9Y251 543 aa27.51■■□□□ 1.99
PMS1-205ENST00000409985 GOLGA8AA7E2F4 631 aa27.5■■□□□ 1.99
PMS1-205ENST00000409985 SOCS7O14512 581 aa27.5■■□□□ 1.99
PMS1-205ENST00000409985 CDC27P30260 824 aa27.5■■□□□ 1.99
PMS1-205ENST00000409985 LRRC8AQ8IWT6 810 aa27.5■■□□□ 1.99
PMS1-205ENST00000409985 UBE2Q2Q8WVN8 375 aa27.5■■□□□ 1.99
PMS1-205ENST00000409985 FAM13BQ9NYF5 915 aa27.5■■□□□ 1.99
PMS1-205ENST00000409985 ZSWIM5Q9P217 1185 aa27.5■■□□□ 1.99
PMS1-205ENST00000409985 FMNL1O95466 1100 aaPredicted RBP27.49■■□□□ 1.99
PMS1-205ENST00000409985 NTSR2O95665 410 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms