RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 LTBP3Q9NS15 1303 aa18.56■□□□□ 0.56
SHANK2-204ENST00000409530 MYH1P12882 1939 aa18.55■□□□□ 0.56
SHANK2-204ENST00000409530 VIL1P09327 827 aaKnown RBP18.55■□□□□ 0.56
SHANK2-204ENST00000409530 GPR162Q16538 588 aa18.55■□□□□ 0.56
SHANK2-204ENST00000409530 VPS33BQ9H267 617 aa18.55■□□□□ 0.56
SHANK2-204ENST00000409530 NAP1L2Q9ULW6 460 aaPredicted RBP18.55■□□□□ 0.56
SHANK2-204ENST00000409530 TACC3Q9Y6A5 838 aa18.55■□□□□ 0.56
SHANK2-204ENST00000409530 TIAM2Q8IVF5 1701 aa18.55■□□□□ 0.56
SHANK2-204ENST00000409530 SOCS7O14512 581 aa18.55■□□□□ 0.56
SHANK2-204ENST00000409530 EIF6P56537 245 aaKnown RBP18.55■□□□□ 0.56
SHANK2-204ENST00000409530 TCP10Q12799 353 aa18.55■□□□□ 0.56
SHANK2-204ENST00000409530 TRDNQ13061 729 aa18.55■□□□□ 0.56
SHANK2-204ENST00000409530 ALX1Q15699 326 aa18.55■□□□□ 0.56
SHANK2-204ENST00000409530 APOBEC3HQ6NTF7 200 aaKnown RBP18.55■□□□□ 0.56
SHANK2-204ENST00000409530 CDC42EP5Q6NZY7 148 aa18.55■□□□□ 0.56
SHANK2-204ENST00000409530 SNX21Q969T3 373 aa18.55■□□□□ 0.56
SHANK2-204ENST00000409530 ATP8A2Q9NTI2 1148 aa18.55■□□□□ 0.56
SHANK2-204ENST00000409530 ZMYM6O95789 1325 aa18.54■□□□□ 0.56
SHANK2-204ENST00000409530 FOCADQ5VW36 1801 aa18.54■□□□□ 0.56
SHANK2-204ENST00000409530 PLCG2P16885 1265 aa18.54■□□□□ 0.56
SHANK2-204ENST00000409530 PPP4CP60510 307 aa18.54■□□□□ 0.56
SHANK2-204ENST00000409530 FKBP1AP62942 108 aaKnown RBP18.54■□□□□ 0.56
SHANK2-204ENST00000409530 RBM26Q5T8P6 1007 aaKnown RBP18.54■□□□□ 0.56
SHANK2-204ENST00000409530 Q6ZUG5 572 aa18.54■□□□□ 0.56
SHANK2-204ENST00000409530 OGFOD1Q8N543 542 aa18.54■□□□□ 0.56
SHANK2-204ENST00000409530 TTC14Q96N46 770 aa18.54■□□□□ 0.56
SHANK2-204ENST00000409530 TM6SF1Q9BZW5 370 aa18.54■□□□□ 0.56
SHANK2-204ENST00000409530 TDRD3Q9H7E2 651 aaKnown RBP18.54■□□□□ 0.56
SHANK2-204ENST00000409530 RNF181Q9P0P0 153 aa18.54■□□□□ 0.56
SHANK2-204ENST00000409530 SBF1O95248 1867 aa18.54■□□□□ 0.56
SHANK2-204ENST00000409530 MYO3BQ8WXR4 1341 aa18.54■□□□□ 0.56
SHANK2-204ENST00000409530 CLRN2A0PK11 232 aa18.53■□□□□ 0.56
SHANK2-204ENST00000409530 POLR3DP05423 398 aaPredicted RBP18.53■□□□□ 0.56
SHANK2-204ENST00000409530 NFIAQ12857 509 aa18.53■□□□□ 0.56
SHANK2-204ENST00000409530 TSGA10IPQ3SY00 556 aa18.53■□□□□ 0.56
SHANK2-204ENST00000409530 HHIPL2Q6UWX4 724 aa18.53■□□□□ 0.56
SHANK2-204ENST00000409530 MFSD6Q6ZSS7 791 aa18.53■□□□□ 0.56
SHANK2-204ENST00000409530 NCOA7Q8NI08 942 aa18.53■□□□□ 0.56
SHANK2-204ENST00000409530 DYNLL2Q96FJ2 89 aa18.53■□□□□ 0.56
SHANK2-204ENST00000409530 FAM163AQ96GL9 167 aaPredicted RBP18.53■□□□□ 0.56
SHANK2-204ENST00000409530 DDX4Q9NQI0 724 aaKnown RBP18.53■□□□□ 0.56
SHANK2-204ENST00000409530 GPHNQ9NQX3 736 aaPredicted RBP18.53■□□□□ 0.56
SHANK2-204ENST00000409530 LMNB1P20700 586 aa18.53■□□□□ 0.56
SHANK2-204ENST00000409530 TMED8Q6PL24 325 aaPredicted RBP18.53■□□□□ 0.56
SHANK2-204ENST00000409530 IL17RAQ96F46 866 aa18.53■□□□□ 0.56
SHANK2-204ENST00000409530 ZKSCAN3Q9BRR0 538 aa18.53■□□□□ 0.56
SHANK2-204ENST00000409530 ARPP21Q9UBL0 812 aaPredicted RBP18.53■□□□□ 0.56
SHANK2-204ENST00000409530 HDAC9Q9UKV0 1011 aa18.53■□□□□ 0.56
SHANK2-204ENST00000409530 SCAF8Q9UPN6 1271 aaKnown RBP18.53■□□□□ 0.56
SHANK2-204ENST00000409530 DDX60LQ5H9U9 1706 aaKnown RBP18.52■□□□□ 0.56
SHANK2-204ENST00000409530 KDM4AO75164 1064 aa18.52■□□□□ 0.56
SHANK2-204ENST00000409530 LARGE1O95461 756 aa18.52■□□□□ 0.56
SHANK2-204ENST00000409530 STK3Q13188 491 aa18.52■□□□□ 0.56
SHANK2-204ENST00000409530 AKNAD1Q5T1N1 836 aa18.52■□□□□ 0.56
SHANK2-204ENST00000409530 ZDHHC15Q96MV8 337 aa18.52■□□□□ 0.56
SHANK2-204ENST00000409530 SERPINA10Q9UK55 444 aa18.52■□□□□ 0.56
SHANK2-204ENST00000409530 PRC1O43663 620 aa18.52■□□□□ 0.55
SHANK2-204ENST00000409530 GMPSP49915 693 aaPredicted RBP18.52■□□□□ 0.55
SHANK2-204ENST00000409530 TNIP1Q15025 636 aa18.52■□□□□ 0.55
SHANK2-204ENST00000409530 AMOTL1Q8IY63 956 aa18.52■□□□□ 0.55
SHANK2-204ENST00000409530 BRF1Q92994 677 aa18.52■□□□□ 0.55
SHANK2-204ENST00000409530 PRMT6Q96LA8 375 aaPredicted RBP18.52■□□□□ 0.55
SHANK2-204ENST00000409530 DICER1Q9UPY3 1922 aaKnown RBP18.51■□□□□ 0.55
SHANK2-204ENST00000409530 WDHD1O75717 1129 aaPredicted RBP18.51■□□□□ 0.55
SHANK2-204ENST00000409530 PLCD1P51178 756 aa18.51■□□□□ 0.55
SHANK2-204ENST00000409530 CYB5R4Q7L1T6 521 aa18.51■□□□□ 0.55
SHANK2-204ENST00000409530 RAB11FIP4Q86YS3 637 aa18.51■□□□□ 0.55
SHANK2-204ENST00000409530 SLC44A5Q8NCS7 719 aa18.51■□□□□ 0.55
SHANK2-204ENST00000409530 TMX3Q96JJ7 454 aa18.51■□□□□ 0.55
SHANK2-204ENST00000409530 RANBP6O60518 1105 aaKnown RBP18.5■□□□□ 0.55
SHANK2-204ENST00000409530 TOB2Q14106 344 aaPredicted RBP18.5■□□□□ 0.55
SHANK2-204ENST00000409530 DLGAP5Q15398 846 aa18.5■□□□□ 0.55
SHANK2-204ENST00000409530 DHX32Q7L7V1 743 aaKnown RBP18.5■□□□□ 0.55
SHANK2-204ENST00000409530 MB21D2Q8IYB1 491 aaPredicted RBP18.5■□□□□ 0.55
SHANK2-204ENST00000409530 GMLQ99445 158 aa18.5■□□□□ 0.55
SHANK2-204ENST00000409530 VEZTQ9HBM0 779 aa18.5■□□□□ 0.55
SHANK2-204ENST00000409530 EGFRP00533 1210 aa18.5■□□□□ 0.55
SHANK2-204ENST00000409530 ANTXR2P58335 489 aa18.5■□□□□ 0.55
SHANK2-204ENST00000409530 GIMAP6Q6P9H5 292 aa18.5■□□□□ 0.55
SHANK2-204ENST00000409530 ZSCAN29Q8IWY8 852 aaPredicted RBP18.5■□□□□ 0.55
SHANK2-204ENST00000409530 MKRN1Q9UHC7 482 aaKnown RBP18.5■□□□□ 0.55
SHANK2-204ENST00000409530 TCP10L2B9ZVM9 353 aa18.49■□□□□ 0.55
SHANK2-204ENST00000409530 FZD9O00144 591 aa18.49■□□□□ 0.55
SHANK2-204ENST00000409530 IGSF3O75054 1194 aa18.49■□□□□ 0.55
SHANK2-204ENST00000409530 HMGB1P09429 215 aaKnown RBP18.49■□□□□ 0.55
SHANK2-204ENST00000409530 SLURP2P0DP57 97 aa18.49■□□□□ 0.55
SHANK2-204ENST00000409530 MCM5P33992 734 aa18.49■□□□□ 0.55
SHANK2-204ENST00000409530 APOBRQ0VD83 1088 aa18.49■□□□□ 0.55
SHANK2-204ENST00000409530 CERS3Q8IU89 383 aa18.49■□□□□ 0.55
SHANK2-204ENST00000409530 ZFPM1Q8IX07 1006 aa18.49■□□□□ 0.55
SHANK2-204ENST00000409530 MICALL2Q8IY33 904 aa18.49■□□□□ 0.55
SHANK2-204ENST00000409530 AGBL3Q8NEM8 1001 aa18.49■□□□□ 0.55
SHANK2-204ENST00000409530 STAG1Q8WVM7 1258 aa18.49■□□□□ 0.55
SHANK2-204ENST00000409530 NECAB1Q8N987 351 aa18.49■□□□□ 0.55
SHANK2-204ENST00000409530 TPCN1Q9ULQ1 816 aa18.49■□□□□ 0.55
SHANK2-204ENST00000409530 SPDYE2BA6NHP3 402 aa18.48■□□□□ 0.55
SHANK2-204ENST00000409530 SPDYE6P0CI01 402 aa18.48■□□□□ 0.55
SHANK2-204ENST00000409530 TBC1D10BQ4KMP7 808 aaPredicted RBP18.48■□□□□ 0.55
SHANK2-204ENST00000409530 FAM47AQ5JRC9 791 aa18.48■□□□□ 0.55
SHANK2-204ENST00000409530 C12orf60Q5U649 245 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms