RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 RBM8AQ9Y5S9 174 aaKnown RBP18.2■□□□□ 0.5
AP1S3-204ENST00000409375 CLRN2A0PK11 232 aa18.19■□□□□ 0.5
AP1S3-204ENST00000409375 FGAP02671 866 aa18.19■□□□□ 0.5
AP1S3-204ENST00000409375 SLC3A2P08195 630 aaKnown RBP18.19■□□□□ 0.5
AP1S3-204ENST00000409375 VEGFAP15692 232 aaPredicted RBP18.19■□□□□ 0.5
AP1S3-204ENST00000409375 ZKSCAN1P17029 563 aaPredicted RBP18.19■□□□□ 0.5
AP1S3-204ENST00000409375 FAM83AQ86UY5 434 aa18.19■□□□□ 0.5
AP1S3-204ENST00000409375 TRPM4Q8TD43 1214 aa18.19■□□□□ 0.5
AP1S3-204ENST00000409375 DHX36Q9H2U1 1008 aaKnown RBP18.19■□□□□ 0.5
AP1S3-204ENST00000409375 PITPNM2Q9BZ72 1349 aa18.19■□□□□ 0.5
AP1S3-204ENST00000409375 MYH1P12882 1939 aa18.18■□□□□ 0.5
AP1S3-204ENST00000409375 ZNF213O14771 459 aa18.18■□□□□ 0.5
AP1S3-204ENST00000409375 POLR3DP05423 398 aaPredicted RBP18.18■□□□□ 0.5
AP1S3-204ENST00000409375 HLA-DOAP06340 250 aa18.18■□□□□ 0.5
AP1S3-204ENST00000409375 TTC6Q86TZ1 520 aa18.18■□□□□ 0.5
AP1S3-204ENST00000409375 ZC3H15Q8WU90 426 aaKnown RBP18.18■□□□□ 0.5
AP1S3-204ENST00000409375 DCPSQ96C86 337 aaKnown RBP18.18■□□□□ 0.5
AP1S3-204ENST00000409375 OSBPL5Q9H0X9 879 aaPredicted RBP18.18■□□□□ 0.5
AP1S3-204ENST00000409375 TAF1DQ9H5J8 278 aaPredicted RBP18.18■□□□□ 0.5
AP1S3-204ENST00000409375 EPB41L4AQ9HCS5 686 aaPredicted RBP18.18■□□□□ 0.5
AP1S3-204ENST00000409375 TAOK2Q9UL54 1235 aa18.18■□□□□ 0.5
AP1S3-204ENST00000409375 COL2A1P02458 1487 aaPredicted RBP18.18■□□□□ 0.5
AP1S3-204ENST00000409375 FOXP2O15409 715 aa18.17■□□□□ 0.5
AP1S3-204ENST00000409375 SBK1Q52WX2 424 aa18.17■□□□□ 0.5
AP1S3-204ENST00000409375 FAM151AQ8WW52 585 aa18.17■□□□□ 0.5
AP1S3-204ENST00000409375 C22orf23Q9BZE7 217 aa18.17■□□□□ 0.5
AP1S3-204ENST00000409375 MKRN1Q9UHC7 482 aaKnown RBP18.17■□□□□ 0.5
AP1S3-204ENST00000409375 PPP2R3BQ9Y5P8 575 aa18.17■□□□□ 0.5
AP1S3-204ENST00000409375 BAZ2AQ9UIF9 1905 aaKnown RBP18.17■□□□□ 0.5
AP1S3-204ENST00000409375 TCP10L2B9ZVM9 353 aa18.16■□□□□ 0.5
AP1S3-204ENST00000409375 USP17L12C9JPN9 530 aa18.16■□□□□ 0.5
AP1S3-204ENST00000409375 USP17L21D6R901 530 aa18.16■□□□□ 0.5
AP1S3-204ENST00000409375 EGFRP00533 1210 aa18.16■□□□□ 0.5
AP1S3-204ENST00000409375 HSPA4P34932 840 aa18.16■□□□□ 0.5
AP1S3-204ENST00000409375 CACNB3P54284 484 aa18.16■□□□□ 0.5
AP1S3-204ENST00000409375 NFIAQ12857 509 aa18.16■□□□□ 0.5
AP1S3-204ENST00000409375 KRT32Q14532 448 aa18.16■□□□□ 0.5
AP1S3-204ENST00000409375 NECTIN1Q15223 517 aa18.16■□□□□ 0.5
AP1S3-204ENST00000409375 EAPPQ56P03 285 aaPredicted RBP18.16■□□□□ 0.5
AP1S3-204ENST00000409375 ANGEL2Q5VTE6 544 aaKnown RBP18.16■□□□□ 0.5
AP1S3-204ENST00000409375 ZSCAN29Q8IWY8 852 aaPredicted RBP18.16■□□□□ 0.5
AP1S3-204ENST00000409375 HOOK2Q96ED9 719 aa18.16■□□□□ 0.5
AP1S3-204ENST00000409375 ZNF287Q9HBT7 754 aa18.16■□□□□ 0.5
AP1S3-204ENST00000409375 GGA3Q9NZ52 723 aa18.16■□□□□ 0.5
AP1S3-204ENST00000409375 LAMA4Q16363 1823 aa18.16■□□□□ 0.5
AP1S3-204ENST00000409375 LAMB1P07942 1786 aa18.15■□□□□ 0.5
AP1S3-204ENST00000409375 MINDY4BA8MYZ0 360 aa18.15■□□□□ 0.5
AP1S3-204ENST00000409375 PCP11498 1178 aaKnown RBP18.15■□□□□ 0.5
AP1S3-204ENST00000409375 HIRAP54198 1017 aaPredicted RBP18.15■□□□□ 0.5
AP1S3-204ENST00000409375 ANAPC15P60006 121 aa18.15■□□□□ 0.5
AP1S3-204ENST00000409375 PPARAQ07869 468 aa18.15■□□□□ 0.5
AP1S3-204ENST00000409375 TCP10Q12799 353 aa18.15■□□□□ 0.5
AP1S3-204ENST00000409375 CREB3L3Q68CJ9 461 aa18.15■□□□□ 0.5
AP1S3-204ENST00000409375 CTR9Q6PD62 1173 aa18.15■□□□□ 0.5
AP1S3-204ENST00000409375 SULF1Q8IWU6 871 aa18.15■□□□□ 0.5
AP1S3-204ENST00000409375 TRIM34Q9BYJ4 488 aa18.15■□□□□ 0.5
AP1S3-204ENST00000409375 RNF41Q9H4P4 317 aaPredicted RBP18.15■□□□□ 0.5
AP1S3-204ENST00000409375 RRAGCQ9HB90 399 aa18.15■□□□□ 0.5
AP1S3-204ENST00000409375 DDX4Q9NQI0 724 aaKnown RBP18.15■□□□□ 0.5
AP1S3-204ENST00000409375 FAM198AQ9UFP1 575 aa18.15■□□□□ 0.5
AP1S3-204ENST00000409375 ATRNL1Q5VV63 1379 aa18.15■□□□□ 0.5
AP1S3-204ENST00000409375 DDX60LQ5H9U9 1706 aaKnown RBP18.15■□□□□ 0.5
AP1S3-204ENST00000409375 SLC27A2O14975 620 aa18.14■□□□□ 0.49
AP1S3-204ENST00000409375 NT5C2P49902 561 aa18.14■□□□□ 0.49
AP1S3-204ENST00000409375 C12orf60Q5U649 245 aa18.14■□□□□ 0.49
AP1S3-204ENST00000409375 TSHZ2Q9NRE2 1034 aa18.14■□□□□ 0.49
AP1S3-204ENST00000409375 SAP30BPQ9UHR5 308 aaKnown RBP18.14■□□□□ 0.49
AP1S3-204ENST00000409375 ANAPC4Q9UJX5 808 aa18.14■□□□□ 0.49
AP1S3-204ENST00000409375 PDE4BQ07343 736 aa18.13■□□□□ 0.49
AP1S3-204ENST00000409375 TRDNQ13061 729 aa18.13■□□□□ 0.49
AP1S3-204ENST00000409375 PI4KBQ9UBF8 816 aa18.13■□□□□ 0.49
AP1S3-204ENST00000409375 PALD1Q9ULE6 856 aa18.13■□□□□ 0.49
AP1S3-204ENST00000409375 CLEC11AQ9Y240 323 aa18.13■□□□□ 0.49
AP1S3-204ENST00000409375 POTECB2RU33 542 aa18.12■□□□□ 0.49
AP1S3-204ENST00000409375 CYP21A2P08686 494 aa18.12■□□□□ 0.49
AP1S3-204ENST00000409375 PSMA5P28066 241 aa18.12■□□□□ 0.49
AP1S3-204ENST00000409375 RBM25P49756 843 aaKnown RBP18.12■□□□□ 0.49
AP1S3-204ENST00000409375 RASA3Q14644 834 aa18.12■□□□□ 0.49
AP1S3-204ENST00000409375 FOXP4Q8IVH2 680 aaPredicted RBP18.12■□□□□ 0.49
AP1S3-204ENST00000409375 CRACR2BQ8N4Y2 399 aaPredicted RBP18.12■□□□□ 0.49
AP1S3-204ENST00000409375 ZNF526Q8TF50 670 aaPredicted RBP18.12■□□□□ 0.49
AP1S3-204ENST00000409375 TBC1D32Q96NH3 1257 aa18.12■□□□□ 0.49
AP1S3-204ENST00000409375 CSRNP1Q96S65 589 aa18.12■□□□□ 0.49
AP1S3-204ENST00000409375 DEFB129Q9H1M3 183 aa18.12■□□□□ 0.49
AP1S3-204ENST00000409375 EHD4Q9H223 541 aa18.12■□□□□ 0.49
AP1S3-204ENST00000409375 CNNM2Q9H8M5 875 aa18.12■□□□□ 0.49
AP1S3-204ENST00000409375 GPBP1L1Q9HC44 474 aaPredicted RBP18.12■□□□□ 0.49
AP1S3-204ENST00000409375 SWAP70Q9UH65 585 aa18.12■□□□□ 0.49
AP1S3-204ENST00000409375 CNTNAP1P78357 1384 aa18.12■□□□□ 0.49
AP1S3-204ENST00000409375 ROBO3Q96MS0 1386 aa18.12■□□□□ 0.49
AP1S3-204ENST00000409375 HAND2P61296 217 aa18.11■□□□□ 0.49
AP1S3-204ENST00000409375 TSGA10IPQ3SY00 556 aa18.11■□□□□ 0.49
AP1S3-204ENST00000409375 MFSD6Q6ZSS7 791 aa18.11■□□□□ 0.49
AP1S3-204ENST00000409375 RALYLQ86SE5 291 aaKnown RBP18.11■□□□□ 0.49
AP1S3-204ENST00000409375 PGAP2Q9UHJ9 254 aa18.11■□□□□ 0.49
AP1S3-204ENST00000409375 HERC5Q9UII4 1024 aaKnown RBP18.11■□□□□ 0.49
AP1S3-204ENST00000409375 SERPINB13Q9UIV8 391 aa18.11■□□□□ 0.49
AP1S3-204ENST00000409375 ASTN2O75129 1339 aaPredicted RBP18.1■□□□□ 0.49
AP1S3-204ENST00000409375 AKNAD1Q5T1N1 836 aa18.1■□□□□ 0.49
AP1S3-204ENST00000409375 KRT26Q7Z3Y9 468 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms