RNA–Protein interactions for RNA: ENST00000404857.6

KCNMA1-211, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-211ENST00000404857 BECN2A8MW95 431 aa9.53□□□□□ -0.88
KCNMA1-211ENST00000404857 GTF2A1P52655 376 aaPredicted RBP9.53□□□□□ -0.88
KCNMA1-211ENST00000404857 MCMDC2Q4G0Z9 681 aa9.53□□□□□ -0.88
KCNMA1-211ENST00000404857 NLGN1Q8N2Q7 840 aa9.53□□□□□ -0.88
KCNMA1-211ENST00000404857 LRRN4CLQ8ND94 238 aa9.53□□□□□ -0.88
KCNMA1-211ENST00000404857 SRRTQ9BXP5 876 aaKnown RBP9.53□□□□□ -0.88
KCNMA1-211ENST00000404857 NR1I2O75469 434 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 ST5P78524 1137 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 APOBRQ0VD83 1088 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 CCDC73Q6ZRK6 1079 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 CHST3Q7LGC8 479 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 FBXL16Q8N461 479 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 TDRD7Q8NHU6 1098 aaKnown RBP9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 CLIP2Q9UDT6 1046 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 COL1A1P02452 1464 aaPredicted RBP9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 SEC31AO94979 1220 aaKnown RBP9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 TIMM10P62072 90 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 ZRSR1Q15695 479 aaKnown RBP9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 PTPN21Q16825 1174 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 CACTINQ8WUQ7 758 aaKnown RBP9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 PLEKHA4Q9H4M7 779 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 MMP14P50281 582 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 GNL2Q13823 731 aaKnown RBP9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 USPL1Q5W0Q7 1092 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 SGIP1Q9BQI5 828 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 CLSTN2Q9H4D0 955 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 ZBTB3Q9H5J0 574 aa9.52□□□□□ -0.89
KCNMA1-211ENST00000404857 LOC285556D6RIA3 1793 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 ANKRD18BA2A2Z9 1011 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 CYP21A2P08686 494 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 UBE4AQ14139 1066 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 SF3A1Q15459 793 aaKnown RBP9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 SLC15A2Q16348 729 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 BRIP1Q9BX63 1249 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 CFAP45Q9UL16 551 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 ELP1O95163 1332 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 GNPATO15228 680 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 CDC25BP30305 580 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 NFIXQ14938 502 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 WASHC4Q2M389 1173 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 TTLL5Q6EMB2 1281 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 CCAR1Q8IX12 1150 aaKnown RBP9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 PGBD1Q96JS3 809 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 ZSWIM4Q9H7M6 989 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 NCOA5Q9HCD5 579 aaKnown RBP9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 FAM53CQ9NYF3 392 aa9.51□□□□□ -0.89
KCNMA1-211ENST00000404857 ME1P48163 572 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 CCDC144BQ3MJ40 725 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 CCDC144CPQ8IYA2 1237 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 ERO1AQ96HE7 468 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 FTOQ9C0B1 505 aaKnown RBP eCLIP9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 NID2Q14112 1375 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 KINO60870 393 aaKnown RBP9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 IFIT1P09914 478 aaKnown RBP9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 FAM193AP78312 1265 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 FKBP4Q02790 459 aaKnown RBP eCLIP9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 DDR1Q08345 913 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 RAB11FIP4Q86YS3 637 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 FAM212AQ96EL1 285 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 ANKRD2Q9GZV1 360 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 PTPDC1A2A3K4 754 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 PATL2C9JE40 543 aaKnown RBP9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 TRIM37O94972 964 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 PDE8BO95263 885 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 SCRN1Q12765 414 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 PTPN14Q15678 1187 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 PRR5LQ6MZQ0 368 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 TPTE2Q6XPS3 522 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 CREBRFQ8IUR6 639 aa9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 ZNF594Q96JF6 807 aaPredicted RBP9.5□□□□□ -0.89
KCNMA1-211ENST00000404857 LMAN1P49257 510 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 HAND2P61296 217 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 RESTQ13127 1097 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 IFIT5Q13325 482 aaKnown RBP9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 GRAPQ13588 217 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 PUM3Q15397 648 aaKnown RBP9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 RBM43Q6ZSC3 357 aaKnown RBP9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 COL23A1Q86Y22 540 aaPredicted RBP9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 GRAPLQ8TC17 118 aaPredicted RBP9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 SDF4Q9BRK5 362 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 LTBP3Q9NS15 1303 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 NEMFO60524 1076 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 ZPR1O75312 459 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 ITGA6P23229 1130 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 DHX32Q7L7V1 743 aaKnown RBP9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 FSIP1Q8NA03 581 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 KBTBD3Q8NAB2 608 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 LPIN2Q92539 896 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 ZNF396Q96N95 335 aaPredicted RBP9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 ZSCAN16Q9H4T2 348 aaPredicted RBP9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 PAG1Q9NWQ8 432 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 NIP7Q9Y221 180 aaKnown RBP eCLIP9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 ADAMTSL1Q8N6G6 1762 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 WDR19Q8NEZ3 1342 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 UQCRFS1P1P0C7P4 283 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 HOMER1Q86YM7 354 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 LRRC8AQ8IWT6 810 aa9.49□□□□□ -0.89
KCNMA1-211ENST00000404857 SETDB2Q96T68 719 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms