RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 BAG1Q99933 345 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 RASAL2Q9UJF2 1139 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 ITSN2Q9NZM3 1697 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 PIK3R4Q99570 1358 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 FSIP1Q8NA03 581 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 UIMC1Q96RL1 719 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 ASXL1Q8IXJ9 1541 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 TMTC2Q8N394 836 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 DDX17Q92841 729 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 SMC6Q96SB8 1091 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 PLIN2Q99541 437 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 GOLGA6L9A6NEM1 432 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 PDE4DQ08499 809 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 ITKQ08881 620 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 ANKRD35Q8N283 1001 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 MRRFQ96E11 262 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 KIF5AQ12840 1032 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
CACNA1C-210ENST00000399606 RTL9Q8NET4 1388 aa12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 GIPC1O14908 333 aa12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 CCNA1P78396 465 aa12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 SNW1Q13573 536 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 RETREG2Q8NC44 543 aa12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 SKA2Q8WVK7 121 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 FAM204AQ9H8W3 233 aa12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 COL17A1Q9UMD9 1497 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 ARHGEF11O15085 1522 aa12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 CDK13Q14004 1512 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 SLITRK6Q9H5Y7 841 aa12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 RRAGDQ9NQL2 400 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 SWAP70Q9UH65 585 aa12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 STK10O94804 968 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 MCM7P33993 719 aa12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 CHMP6Q96FZ7 201 aa12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 PPANQ9NQ55 473 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 ADGRL2O95490 1459 aa12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 STMN4Q9H169 189 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-210ENST00000399606 SPDYE2BA6NHP3 402 aa12.27□□□□□ -0.44
CACNA1C-210ENST00000399606 SPDYE6P0CI01 402 aa12.27□□□□□ -0.44
CACNA1C-210ENST00000399606 SETDB1Q15047 1291 aa12.27□□□□□ -0.44
CACNA1C-210ENST00000399606 AKAP4Q5JQC9 854 aa12.27□□□□□ -0.44
CACNA1C-210ENST00000399606 ZSWIM4Q9H7M6 989 aa12.27□□□□□ -0.44
CACNA1C-210ENST00000399606 PRAG1Q86YV5 1406 aa12.27□□□□□ -0.44
CACNA1C-210ENST00000399606 CFAP157Q5JU67 520 aa12.27□□□□□ -0.44
CACNA1C-210ENST00000399606 C16orf45Q96MC5 204 aaPredicted RBP12.27□□□□□ -0.44
CACNA1C-210ENST00000399606 FAM170AA1A519 330 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 TYW5A2RUC4 315 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 GNAT2P19087 354 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 POLR3AO14802 1390 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 TESPA1A2RU30 521 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 STX1AQ16623 288 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 EHBP1Q8NDI1 1231 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 NEK1Q96PY6 1258 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 PLCH2O75038 1416 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 CAVIN2O95810 425 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 YARSP54577 528 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 ANKS4BQ8N8V4 417 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 SELENOSQ9BQE4 189 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 ALG1Q9BT22 464 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 MKRN1Q9UHC7 482 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 MOSPD1Q9UJG1 213 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 ARHGEF35A5YM69 484 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 CFBP00751 764 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 ATICP31939 592 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 DALRD3Q5D0E6 543 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 FAM180AQ6UWF9 173 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 SLC10A4Q96EP9 437 aa12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 CCDC94Q9BW85 323 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-210ENST00000399606 ATP2A1O14983 1001 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 DNMT1P26358 1616 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 GNA11P29992 359 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 SF3A3Q12874 501 aaKnown RBP eCLIP12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 PRR16Q569H4 304 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 KRT27Q7Z3Y8 459 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 SCAND2PQ9GZW5 306 aaPredicted RBP12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 GTF2IP78347 998 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 INF2Q27J81 1249 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 NCAPH2Q6IBW4 605 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 ECHDC1Q9NTX5 307 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 ZFYP08048 801 aaPredicted RBP12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 KRT2P35908 639 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 KANK3Q6NY19 840 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 NAP1L4Q99733 375 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 SELENOOQ9BVL4 669 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 SLC7A5P2Q9GIP4 190 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 SLC17A8Q8NDX2 589 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 PIDD1Q9HB75 910 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 KRT33BQ14525 404 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 USP40Q9NVE5 1235 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 ATP6V0A2Q9Y487 856 aa12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 EIF4G3O43432 1585 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-210ENST00000399606 HGSO14964 777 aaPredicted RBP12.25□□□□□ -0.45
CACNA1C-210ENST00000399606 JAKMIP2Q96AA8 810 aa12.25□□□□□ -0.45
CACNA1C-210ENST00000399606 ZKSCAN3Q9BRR0 538 aa12.25□□□□□ -0.45
CACNA1C-210ENST00000399606 LRRC2Q9BYS8 371 aa12.25□□□□□ -0.45
CACNA1C-210ENST00000399606 SUDS3Q9H7L9 328 aaPredicted RBP12.25□□□□□ -0.45
CACNA1C-210ENST00000399606 IBTKQ9P2D0 1353 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms