RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ARFGEF1Q9Y6D6 1849 aa22.82■■□□□ 1.24
PDLIM2-204ENST00000397760 MINDY4BA8MYZ0 360 aa22.82■■□□□ 1.24
PDLIM2-204ENST00000397760 BAG4O95429 457 aaKnown RBP22.82■■□□□ 1.24
PDLIM2-204ENST00000397760 PPARAQ07869 468 aa22.82■■□□□ 1.24
PDLIM2-204ENST00000397760 KLHL40Q2TBA0 621 aa22.82■■□□□ 1.24
PDLIM2-204ENST00000397760 CIAPIN1Q6FI81 312 aa22.82■■□□□ 1.24
PDLIM2-204ENST00000397760 SERPINA10Q9UK55 444 aa22.82■■□□□ 1.24
PDLIM2-204ENST00000397760 USP17L12C9JPN9 530 aa22.81■■□□□ 1.24
PDLIM2-204ENST00000397760 USP17L21D6R901 530 aa22.81■■□□□ 1.24
PDLIM2-204ENST00000397760 RBM5P52756 815 aaKnown RBP eCLIP22.81■■□□□ 1.24
PDLIM2-204ENST00000397760 AK2P54819 239 aa22.81■■□□□ 1.24
PDLIM2-204ENST00000397760 APOBEC3HQ6NTF7 200 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-204ENST00000397760 ZDHHC15Q96MV8 337 aa22.81■■□□□ 1.24
PDLIM2-204ENST00000397760 GMLQ99445 158 aa22.81■■□□□ 1.24
PDLIM2-204ENST00000397760 MKRN1Q9UHC7 482 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-204ENST00000397760 TRDNQ13061 729 aa22.8■■□□□ 1.24
PDLIM2-204ENST00000397760 NOL8Q76FK4 1167 aaKnown RBP22.8■■□□□ 1.24
PDLIM2-204ENST00000397760 DHX32Q7L7V1 743 aaKnown RBP22.8■■□□□ 1.24
PDLIM2-204ENST00000397760 NCOA7Q8NI08 942 aa22.8■■□□□ 1.24
PDLIM2-204ENST00000397760 TCEANC2Q96MN5 208 aa22.8■■□□□ 1.24
PDLIM2-204ENST00000397760 MCM9Q9NXL9 1143 aa22.8■■□□□ 1.24
PDLIM2-204ENST00000397760 ANAPC4Q9UJX5 808 aa22.8■■□□□ 1.24
PDLIM2-204ENST00000397760 ZBTB12Q9Y330 459 aaPredicted RBP22.8■■□□□ 1.24
PDLIM2-204ENST00000397760 RALYLQ86SE5 291 aaKnown RBP22.8■■□□□ 1.24
PDLIM2-204ENST00000397760 AGBL3Q8NEM8 1001 aa22.8■■□□□ 1.24
PDLIM2-204ENST00000397760 FOXD4L1Q9NU39 408 aa22.8■■□□□ 1.24
PDLIM2-204ENST00000397760 USP40Q9NVE5 1235 aa22.8■■□□□ 1.24
PDLIM2-204ENST00000397760 ARPP21Q9UBL0 812 aaPredicted RBP22.8■■□□□ 1.24
PDLIM2-204ENST00000397760 ZNF646O15015 1829 aaPredicted RBP22.79■■□□□ 1.24
PDLIM2-204ENST00000397760 CYP2D7A0A087X1C5 515 aa22.79■■□□□ 1.24
PDLIM2-204ENST00000397760 TNIP1Q15025 636 aa22.79■■□□□ 1.24
PDLIM2-204ENST00000397760 SBK1Q52WX2 424 aa22.79■■□□□ 1.24
PDLIM2-204ENST00000397760 AKNAD1Q5T1N1 836 aa22.79■■□□□ 1.24
PDLIM2-204ENST00000397760 MAPKAPK5Q8IW41 473 aa22.79■■□□□ 1.24
PDLIM2-204ENST00000397760 EXOSC10Q01780 885 aaKnown RBP22.78■■□□□ 1.24
PDLIM2-204ENST00000397760 CDC42EP5Q6NZY7 148 aa22.78■■□□□ 1.24
PDLIM2-204ENST00000397760 STAG1Q8WVM7 1258 aa22.78■■□□□ 1.24
PDLIM2-204ENST00000397760 ALDH8A1Q9H2A2 487 aaPredicted RBP22.78■■□□□ 1.24
PDLIM2-204ENST00000397760 PCDHAC2Q9Y5I4 1007 aa22.78■■□□□ 1.24
PDLIM2-204ENST00000397760 USP17L8P0C7I0 530 aa22.78■■□□□ 1.24
PDLIM2-204ENST00000397760 MFSD6Q6ZSS7 791 aa22.78■■□□□ 1.24
PDLIM2-204ENST00000397760 STK11IPQ8N1F8 1099 aa22.78■■□□□ 1.24
PDLIM2-204ENST00000397760 INCENPQ9NQS7 918 aa22.78■■□□□ 1.24
PDLIM2-204ENST00000397760 HDAC9Q9UKV0 1011 aa22.78■■□□□ 1.24
PDLIM2-204ENST00000397760 TACC3Q9Y6A5 838 aa22.78■■□□□ 1.24
PDLIM2-204ENST00000397760 SMIM22K7EJ46 135 aa22.77■■□□□ 1.24
PDLIM2-204ENST00000397760 FZD9O00144 591 aa22.77■■□□□ 1.24
PDLIM2-204ENST00000397760 EIF6P56537 245 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-204ENST00000397760 CFAP100Q494V2 611 aa22.77■■□□□ 1.24
PDLIM2-204ENST00000397760 MB21D2Q8IYB1 491 aaPredicted RBP22.77■■□□□ 1.24
PDLIM2-204ENST00000397760 OGFOD1Q8N543 542 aa22.77■■□□□ 1.24
PDLIM2-204ENST00000397760 RNF41Q9H4P4 317 aaPredicted RBP22.77■■□□□ 1.24
PDLIM2-204ENST00000397760 FLT1P17948 1338 aa22.76■■□□□ 1.23
PDLIM2-204ENST00000397760 NEDD4P46934 1319 aa22.76■■□□□ 1.23
PDLIM2-204ENST00000397760 CYP2D6P10635 497 aa22.76■■□□□ 1.23
PDLIM2-204ENST00000397760 YBX3P16989 372 aaKnown RBP eCLIP22.76■■□□□ 1.23
PDLIM2-204ENST00000397760 LMNB1P20700 586 aa22.76■■□□□ 1.23
PDLIM2-204ENST00000397760 ANKRD1Q15327 319 aa22.76■■□□□ 1.23
PDLIM2-204ENST00000397760 TMX3Q96JJ7 454 aa22.76■■□□□ 1.23
PDLIM2-204ENST00000397760 LARP6Q9BRS8 491 aaKnown RBP22.76■■□□□ 1.23
PDLIM2-204ENST00000397760 CNNM2Q9H8M5 875 aa22.76■■□□□ 1.23
PDLIM2-204ENST00000397760 LIMCH1Q9UPQ0 1083 aa22.76■■□□□ 1.23
PDLIM2-204ENST00000397760 PSME4Q14997 1843 aa22.75■■□□□ 1.23
PDLIM2-204ENST00000397760 MCM5P33992 734 aa22.75■■□□□ 1.23
PDLIM2-204ENST00000397760 TOB2Q14106 344 aaPredicted RBP22.75■■□□□ 1.23
PDLIM2-204ENST00000397760 Q6ZUG5 572 aa22.75■■□□□ 1.23
PDLIM2-204ENST00000397760 CHST3Q7LGC8 479 aa22.75■■□□□ 1.23
PDLIM2-204ENST00000397760 AMOTL1Q8IY63 956 aa22.75■■□□□ 1.23
PDLIM2-204ENST00000397760 LRRC2Q9BYS8 371 aa22.75■■□□□ 1.23
PDLIM2-204ENST00000397760 SOCS7O14512 581 aa22.75■■□□□ 1.23
PDLIM2-204ENST00000397760 WDHD1O75717 1129 aaPredicted RBP22.75■■□□□ 1.23
PDLIM2-204ENST00000397760 FGD1P98174 961 aa22.75■■□□□ 1.23
PDLIM2-204ENST00000397760 C12orf60Q5U649 245 aa22.75■■□□□ 1.23
PDLIM2-204ENST00000397760 KRT23Q9C075 422 aa22.75■■□□□ 1.23
PDLIM2-204ENST00000397760 SAP30BPQ9UHR5 308 aaKnown RBP22.75■■□□□ 1.23
PDLIM2-204ENST00000397760 B4E1Z4 1266 aa22.74■■□□□ 1.23
PDLIM2-204ENST00000397760 PRC1O43663 620 aa22.74■■□□□ 1.23
PDLIM2-204ENST00000397760 POLR3DP05423 398 aaPredicted RBP22.74■■□□□ 1.23
PDLIM2-204ENST00000397760 EVX2Q03828 476 aa22.74■■□□□ 1.23
PDLIM2-204ENST00000397760 PICALMQ13492 652 aa22.74■■□□□ 1.23
PDLIM2-204ENST00000397760 SLC4A8Q2Y0W8 1093 aa22.74■■□□□ 1.23
PDLIM2-204ENST00000397760 TOMM22Q9NS69 142 aa22.74■■□□□ 1.23
PDLIM2-204ENST00000397760 SLC3A2P08195 630 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-204ENST00000397760 RRP12Q5JTH9 1297 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-204ENST00000397760 NKX2-3Q8TAU0 364 aa22.73■■□□□ 1.23
PDLIM2-204ENST00000397760 INTS4Q96HW7 963 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-204ENST00000397760 LAMA4Q16363 1823 aa22.73■■□□□ 1.23
PDLIM2-204ENST00000397760 ANTXR2P58335 489 aa22.73■■□□□ 1.23
PDLIM2-204ENST00000397760 CUL4AQ13619 759 aa22.73■■□□□ 1.23
PDLIM2-204ENST00000397760 PRMT6Q96LA8 375 aaPredicted RBP22.73■■□□□ 1.23
PDLIM2-204ENST00000397760 PANK2Q9BZ23 570 aa22.73■■□□□ 1.23
PDLIM2-204ENST00000397760 DDX4Q9NQI0 724 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-204ENST00000397760 DDX49Q9Y6V7 483 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-204ENST00000397760 TIAM2Q8IVF5 1701 aa22.72■■□□□ 1.23
PDLIM2-204ENST00000397760 PCP11498 1178 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-204ENST00000397760 RPS12P25398 132 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-204ENST00000397760 DLGAP5Q15398 846 aa22.72■■□□□ 1.23
PDLIM2-204ENST00000397760 CYB5R4Q7L1T6 521 aa22.72■■□□□ 1.23
PDLIM2-204ENST00000397760 ZSCAN31Q96LW9 406 aaPredicted RBP22.72■■□□□ 1.23
PDLIM2-204ENST00000397760 GJA3Q9Y6H8 435 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms