RNA–Protein interactions for RNA: ENST00000393879.3

NKIRAS2-203, Transcript of NFKB inhibitor interacting Ras like 2, humanhuman

TSL 1 (best)

Gene NKIRAS2, Length 4,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKIRAS2-203ENST00000393879 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
NKIRAS2-203ENST00000393879 KIF18AQ8NI77 898 aa11.36□□□□□ -0.59
NKIRAS2-203ENST00000393879 SDR42E1Q8WUS8 393 aa11.36□□□□□ -0.59
NKIRAS2-203ENST00000393879 CDK5RAP3Q96JB5 506 aa11.36□□□□□ -0.59
NKIRAS2-203ENST00000393879 RASGRF1Q13972 1273 aa11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 CCDC150Q8NCX0 1101 aa11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 CABP5Q9NP86 173 aa11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 MAGEC2Q9UBF1 373 aaPredicted RBP11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 CLIC4Q9Y696 253 aa11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 FAM208AQ9UK61 1670 aaKnown RBP11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 KRT2P35908 639 aa11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 SLF2Q8IX21 1173 aa11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 SMARCC2Q8TAQ2 1214 aa11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 IFNKQ9P0W0 207 aa11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 KCNJ14Q9UNX9 436 aa11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 CUTAO60888 179 aa11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 EXOSC10Q01780 885 aaKnown RBP11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 SEC63Q9UGP8 760 aaKnown RBP11.35□□□□□ -0.59
NKIRAS2-203ENST00000393879 LDHBP07195 334 aaKnown RBP11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 TSPY3P0CV98 308 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 TSPY8P0CW00 308 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 AFMP43652 599 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 HSP90AA4PQ58FG1 418 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 ZNF654Q8IZM8 581 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 RBM28Q9NW13 759 aaKnown RBP11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 KCNH3Q9ULD8 1083 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 ABCC12Q96J65 1359 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 ZNF804AQ7Z570 1209 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 PGBD1Q96JS3 809 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 STRBPQ96SI9 672 aaKnown RBP11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 AATFQ9NY61 560 aaKnown RBP eCLIP11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 KIAA1468Q9P260 1216 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 THRAP3Q9Y2W1 955 aaKnown RBP11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 ST5P78524 1137 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 IKQ13123 557 aaPredicted RBP11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 UBE4AQ14139 1066 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 TRAPPC3LQ5T215 181 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 IL17RAQ96F46 866 aa11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 ARGLU1Q9NWB6 273 aaPredicted RBP11.34□□□□□ -0.59
NKIRAS2-203ENST00000393879 SH2B2O14492 632 aaPredicted RBP11.33□□□□□ -0.59
NKIRAS2-203ENST00000393879 PRKAB2O43741 272 aa11.33□□□□□ -0.59
NKIRAS2-203ENST00000393879 NDUFA8P51970 172 aa11.33□□□□□ -0.59
NKIRAS2-203ENST00000393879 DHX58Q96C10 678 aa11.33□□□□□ -0.59
NKIRAS2-203ENST00000393879 V9GY48 417 aaPredicted RBP11.33□□□□□ -0.59
NKIRAS2-203ENST00000393879 A0A1W2PQ27 194 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 A0A1W2PQ64 194 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 A0A1W2PQD8 194 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 PFKFB1P16118 471 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 PPP2R5BQ15173 497 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 CEP135Q66GS9 1140 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 PDCL2Q8N4E4 241 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 GNAQP50148 359 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 KCNQ4P56696 695 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 SPECC1Q5M775 1068 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 MB21D2Q8IYB1 491 aaPredicted RBP11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 CMTR1Q8N1G2 835 aaKnown RBP11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 LCORLQ8N3X6 602 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 LINC00301Q8NCQ3 95 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 POLR3EQ9NVU0 708 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 NLRP12P59046 1061 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 MYL5Q02045 173 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 KIF23Q02241 960 aaPredicted RBP11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 CCDC178Q5BJE1 867 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 ZSWIM5Q9P217 1185 aa11.33□□□□□ -0.6
NKIRAS2-203ENST00000393879 USP17L12C9JPN9 530 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 USP17L21D6R901 530 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 ZSCAN12O43309 604 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 CMA1P23946 247 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 RBM5P52756 815 aaKnown RBP eCLIP11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 TERF1P54274 439 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 ERFEQ4G0M1 354 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 CNBD1Q8NA66 436 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 FANCBQ8NB91 859 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 TDRD7Q8NHU6 1098 aaKnown RBP11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 PAXBP1Q9Y5B6 917 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 TNKSO95271 1327 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 COL5A2P05997 1499 aaPredicted RBP11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 SNW1Q13573 536 aaKnown RBP11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 TBC1D10CQ8IV04 446 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 NOSTRINQ8IVI9 506 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 PYM1Q9BRP8 204 aaKnown RBP11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 VAT1LQ9HCJ6 419 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 BTBD18B2RXH4 712 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 PLEKHG2Q9H7P9 1386 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 ABCA3Q99758 1704 aa11.32□□□□□ -0.6
NKIRAS2-203ENST00000393879 hCG_1642624A0A1W2PR95 340 aa11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 CALML3P27482 149 aa11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 UBA7P41226 1012 aa11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 AIFM3Q96NN9 605 aa11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 GJB4Q9NTQ9 266 aa11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 STRCQ7RTU9 1775 aa11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 COL15A1P39059 1388 aa11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 POLR2DO15514 142 aaKnown RBP11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 SLC39A14Q15043 492 aa11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 ZSCAN29Q8IWY8 852 aaPredicted RBP11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 CCDC12Q8WUD4 166 aaPredicted RBP11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 MPHOSPH10O00566 681 aaKnown RBP11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 HMGB2P26583 209 aaKnown RBP11.31□□□□□ -0.6
NKIRAS2-203ENST00000393879 LIFRP42702 1097 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms