RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 FSTL1Q12841 308 aa15.92■□□□□ 0.14
USP44-202ENST00000393091 MAP4K1Q92918 833 aa15.92■□□□□ 0.14
USP44-202ENST00000393091 AIDAQ96BJ3 306 aa15.92■□□□□ 0.14
USP44-202ENST00000393091 LSG1Q9H089 658 aaKnown RBP15.92■□□□□ 0.14
USP44-202ENST00000393091 DCP1AQ9NPI6 582 aaPredicted RBP15.92■□□□□ 0.14
USP44-202ENST00000393091 AATFQ9NY61 560 aaKnown RBP eCLIP15.92■□□□□ 0.14
USP44-202ENST00000393091 PCP11498 1178 aaKnown RBP15.91■□□□□ 0.14
USP44-202ENST00000393091 DYNLL1P63167 89 aaKnown RBP15.91■□□□□ 0.14
USP44-202ENST00000393091 TSGA10IPQ3SY00 556 aa15.91■□□□□ 0.14
USP44-202ENST00000393091 C8orf34Q49A92 452 aa15.91■□□□□ 0.14
USP44-202ENST00000393091 TBC1D10BQ4KMP7 808 aaPredicted RBP15.91■□□□□ 0.14
USP44-202ENST00000393091 HOOK2Q96ED9 719 aa15.91■□□□□ 0.14
USP44-202ENST00000393091 F8W031 263 aaPredicted RBP15.91■□□□□ 0.14
USP44-202ENST00000393091 CHGBP05060 677 aa15.91■□□□□ 0.14
USP44-202ENST00000393091 ZNF589Q86UQ0 364 aaPredicted RBP15.91■□□□□ 0.14
USP44-202ENST00000393091 IL25Q9H293 177 aa15.91■□□□□ 0.14
USP44-202ENST00000393091 TDRD3Q9H7E2 651 aaKnown RBP15.91■□□□□ 0.14
USP44-202ENST00000393091 DDX4Q9NQI0 724 aaKnown RBP15.91■□□□□ 0.14
USP44-202ENST00000393091 GINM1Q9NU53 330 aa15.91■□□□□ 0.14
USP44-202ENST00000393091 ARPP21Q9UBL0 812 aaPredicted RBP15.91■□□□□ 0.14
USP44-202ENST00000393091 HSPD1P10809 573 aaKnown RBP15.91■□□□□ 0.14
USP44-202ENST00000393091 TEX11Q8IYF3 940 aa15.91■□□□□ 0.14
USP44-202ENST00000393091 IL27Q8NEV9 243 aa15.91■□□□□ 0.14
USP44-202ENST00000393091 EPB41L4AQ9HCS5 686 aaPredicted RBP15.91■□□□□ 0.14
USP44-202ENST00000393091 NMRK2Q9NPI5 230 aa15.91■□□□□ 0.14
USP44-202ENST00000393091 GABPAQ06546 454 aa15.9■□□□□ 0.14
USP44-202ENST00000393091 ARMT1Q9H993 441 aa15.9■□□□□ 0.14
USP44-202ENST00000393091 ZNF112Q9UJU3 913 aa15.9■□□□□ 0.14
USP44-202ENST00000393091 CHADLQ6NUI6 762 aa15.9■□□□□ 0.14
USP44-202ENST00000393091 TMOD2Q9NZR1 351 aa15.9■□□□□ 0.14
USP44-202ENST00000393091 SEC62Q99442 399 aaKnown RBP15.89■□□□□ 0.13
USP44-202ENST00000393091 LOC285556D6RIA3 1793 aa15.89■□□□□ 0.13
USP44-202ENST00000393091 SRCAPQ6ZRS2 3230 aa15.89■□□□□ 0.13
USP44-202ENST00000393091 PLIN4Q96Q06 1357 aa15.89■□□□□ 0.13
USP44-202ENST00000393091 ITGBL1O95965 494 aaPredicted RBP15.89■□□□□ 0.13
USP44-202ENST00000393091 SLFNL1Q499Z3 407 aa15.89■□□□□ 0.13
USP44-202ENST00000393091 CDC37L1Q7L3B6 337 aa15.89■□□□□ 0.13
USP44-202ENST00000393091 SH3BP5LQ7L8J4 393 aa15.89■□□□□ 0.13
USP44-202ENST00000393091 IFNL3Q8IZI9 196 aa15.89■□□□□ 0.13
USP44-202ENST00000393091 ZNF784Q8NCA9 323 aaPredicted RBP15.89■□□□□ 0.13
USP44-202ENST00000393091 YY1P25490 414 aa15.89■□□□□ 0.13
USP44-202ENST00000393091 FKBP1BP68106 108 aa15.89■□□□□ 0.13
USP44-202ENST00000393091 ANGEL2Q5VTE6 544 aaKnown RBP15.89■□□□□ 0.13
USP44-202ENST00000393091 GGA3Q9NZ52 723 aa15.89■□□□□ 0.13
USP44-202ENST00000393091 C12orf60Q5U649 245 aa15.88■□□□□ 0.13
USP44-202ENST00000393091 CWC27Q6UX04 472 aaKnown RBP15.88■□□□□ 0.13
USP44-202ENST00000393091 DCPSQ96C86 337 aaKnown RBP15.88■□□□□ 0.13
USP44-202ENST00000393091 GPBP1L1Q9HC44 474 aaPredicted RBP15.88■□□□□ 0.13
USP44-202ENST00000393091 HERC5Q9UII4 1024 aaKnown RBP15.88■□□□□ 0.13
USP44-202ENST00000393091 FOXP4Q8IVH2 680 aaPredicted RBP15.88■□□□□ 0.13
USP44-202ENST00000393091 MIGA1Q8NAN2 632 aa15.88■□□□□ 0.13
USP44-202ENST00000393091 SLC4A4Q9Y6R1 1079 aa15.88■□□□□ 0.13
USP44-202ENST00000393091 NFIAQ12857 509 aa15.87■□□□□ 0.13
USP44-202ENST00000393091 CTR9Q6PD62 1173 aa15.87■□□□□ 0.13
USP44-202ENST00000393091 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
USP44-202ENST00000393091 ASTN2O75129 1339 aaPredicted RBP15.87■□□□□ 0.13
USP44-202ENST00000393091 PTPRFP10586 1907 aa15.87■□□□□ 0.13
USP44-202ENST00000393091 TOMM70O94826 608 aa15.87■□□□□ 0.13
USP44-202ENST00000393091 TATDN1Q6P1N9 297 aa15.87■□□□□ 0.13
USP44-202ENST00000393091 NACAP1Q9BZK3 213 aa15.87■□□□□ 0.13
USP44-202ENST00000393091 CTNNA3Q9UI47 895 aa15.87■□□□□ 0.13
USP44-202ENST00000393091 RBM5P52756 815 aaKnown RBP eCLIP15.87■□□□□ 0.13
USP44-202ENST00000393091 NECTIN1Q15223 517 aa15.87■□□□□ 0.13
USP44-202ENST00000393091 SMC1BQ8NDV3 1235 aa15.87■□□□□ 0.13
USP44-202ENST00000393091 DEFB129Q9H1M3 183 aa15.87■□□□□ 0.13
USP44-202ENST00000393091 SWAP70Q9UH65 585 aa15.87■□□□□ 0.13
USP44-202ENST00000393091 NOL9Q5SY16 702 aaKnown RBP15.86■□□□□ 0.13
USP44-202ENST00000393091 REC8O95072 547 aa15.86■□□□□ 0.13
USP44-202ENST00000393091 C16orf86Q6ZW13 317 aa15.86■□□□□ 0.13
USP44-202ENST00000393091 TGFBRAP1Q8WUH2 860 aa15.86■□□□□ 0.13
USP44-202ENST00000393091 PI4KBQ9UBF8 816 aa15.86■□□□□ 0.13
USP44-202ENST00000393091 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.86■□□□□ 0.13
USP44-202ENST00000393091 NOVP48745 357 aa15.85■□□□□ 0.13
USP44-202ENST00000393091 TTC6Q86TZ1 520 aa15.85■□□□□ 0.13
USP44-202ENST00000393091 PRKAB2O43741 272 aa15.85■□□□□ 0.13
USP44-202ENST00000393091 RASA3Q14644 834 aa15.85■□□□□ 0.13
USP44-202ENST00000393091 ORC4O43929 436 aa15.85■□□□□ 0.13
USP44-202ENST00000393091 HHIPL1Q96JK4 782 aa15.85■□□□□ 0.13
USP44-202ENST00000393091 MTA3Q9BTC8 594 aa15.85■□□□□ 0.13
USP44-202ENST00000393091 FGAP02671 866 aa15.84■□□□□ 0.13
USP44-202ENST00000393091 SUPT20HL1Q3ZLR7 823 aa15.84■□□□□ 0.13
USP44-202ENST00000393091 VPS53Q5VIR6 699 aa15.84■□□□□ 0.13
USP44-202ENST00000393091 CCDC129Q6ZRS4 1044 aa15.84■□□□□ 0.13
USP44-202ENST00000393091 STAG1Q8WVM7 1258 aa15.84■□□□□ 0.13
USP44-202ENST00000393091 USP26Q9BXU7 913 aa15.84■□□□□ 0.13
USP44-202ENST00000393091 TBC1D2Q9BYX2 928 aa15.84■□□□□ 0.13
USP44-202ENST00000393091 PHF20L1A8MW92 1017 aa15.84■□□□□ 0.13
USP44-202ENST00000393091 ZFPM1Q8IX07 1006 aa15.84■□□□□ 0.13
USP44-202ENST00000393091 NBPF3Q9H094 633 aa15.84■□□□□ 0.13
USP44-202ENST00000393091 SYNPO2Q9UMS6 1093 aa15.84■□□□□ 0.13
USP44-202ENST00000393091 WDR19Q8NEZ3 1342 aa15.84■□□□□ 0.13
USP44-202ENST00000393091 PARP14Q460N5 1801 aa15.83■□□□□ 0.13
USP44-202ENST00000393091 DDTLA6NHG4 134 aaPredicted RBP15.83■□□□□ 0.13
USP44-202ENST00000393091 USP5P45974 858 aa15.83■□□□□ 0.13
USP44-202ENST00000393091 PTH1RQ03431 593 aa15.83■□□□□ 0.13
USP44-202ENST00000393091 SULF1Q8IWU6 871 aa15.83■□□□□ 0.13
USP44-202ENST00000393091 DDRGK1Q96HY6 314 aa15.83■□□□□ 0.13
USP44-202ENST00000393091 HSPA4P34932 840 aa15.83■□□□□ 0.12
USP44-202ENST00000393091 CDCA5Q96FF9 252 aa15.83■□□□□ 0.12
USP44-202ENST00000393091 FBXL16Q8N461 479 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms