RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 DEXIO95424 95 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 CCDC112Q8NEF3 446 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 DCCP43146 1447 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 CAVIN2O95810 425 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 TFAP4Q01664 338 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 PPFIBP1Q86W92 1011 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 FANCBQ8NB91 859 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 PLIN2Q99541 437 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 GGA1Q9UJY5 639 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 IPO7O95373 1038 aaKnown RBP14.35□□□□□ -0.11
CDX2-201ENST00000381020 TOP1P11387 765 aaKnown RBP14.35□□□□□ -0.11
CDX2-201ENST00000381020 UBA7P41226 1012 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 KRI1Q8N9T8 703 aaKnown RBP14.35□□□□□ -0.11
CDX2-201ENST00000381020 CLIC6Q96NY7 704 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 UBN2Q6ZU65 1347 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 CBFA2T2O43439 604 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 STX17P56962 302 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 RESTQ13127 1097 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 MSL1Q68DK7 614 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 ATL3Q6DD88 541 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 PPP1R9BQ96SB3 815 aa14.35□□□□□ -0.11
CDX2-201ENST00000381020 CTDP1Q9Y5B0 961 aaPredicted RBP14.35□□□□□ -0.11
CDX2-201ENST00000381020 SPATA31A1Q5TZJ5 1347 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 VWA3AA6NCI4 1184 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 SF3B2Q13435 895 aaKnown RBP14.34□□□□□ -0.11
CDX2-201ENST00000381020 CYB5R4Q7L1T6 521 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 ZNF34Q8IZ26 560 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 MNS1Q8NEH6 495 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 COL15A1P39059 1388 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 RTL9Q8NET4 1388 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 RPAP1Q9BWH6 1393 aaPredicted RBP14.34□□□□□ -0.11
CDX2-201ENST00000381020 TNNT1P13805 278 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.34□□□□□ -0.11
CDX2-201ENST00000381020 STAMQ92783 540 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 SLC4A9Q96Q91 983 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 IFNKQ9P0W0 207 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 KRT2P35908 639 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 WDR66Q8TBY9 1149 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 QTRT2Q9H974 415 aaKnown RBP14.34□□□□□ -0.11
CDX2-201ENST00000381020 MINPP1Q9UNW1 487 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 NFAT5O94916 1531 aa14.34□□□□□ -0.11
CDX2-201ENST00000381020 ZMYM6O95789 1325 aa14.33□□□□□ -0.11
CDX2-201ENST00000381020 POLR2DO15514 142 aaKnown RBP14.33□□□□□ -0.11
CDX2-201ENST00000381020 KRT18P05783 430 aaKnown RBP14.33□□□□□ -0.11
CDX2-201ENST00000381020 NDUFA8P51970 172 aa14.33□□□□□ -0.11
CDX2-201ENST00000381020 UBASH3AP57075 661 aa14.33□□□□□ -0.11
CDX2-201ENST00000381020 DIXDC1Q155Q3 683 aa14.33□□□□□ -0.11
CDX2-201ENST00000381020 KCNH3Q9ULD8 1083 aa14.33□□□□□ -0.11
CDX2-201ENST00000381020 COL5A2P05997 1499 aaPredicted RBP14.33□□□□□ -0.12
CDX2-201ENST00000381020 SKILP12757 684 aa14.33□□□□□ -0.12
CDX2-201ENST00000381020 PRDX5P30044 214 aa14.33□□□□□ -0.12
CDX2-201ENST00000381020 GTF2IP78347 998 aa14.33□□□□□ -0.12
CDX2-201ENST00000381020 PTPN14Q15678 1187 aa14.33□□□□□ -0.12
CDX2-201ENST00000381020 TMX1Q9H3N1 280 aa14.33□□□□□ -0.12
CDX2-201ENST00000381020 MFSD14BQ5SR56 506 aa14.33□□□□□ -0.12
CDX2-201ENST00000381020 ADALQ6DHV7 355 aa14.33□□□□□ -0.12
CDX2-201ENST00000381020 PIK3AP1Q6ZUJ8 805 aa14.33□□□□□ -0.12
CDX2-201ENST00000381020 MAGEC2Q9UBF1 373 aaPredicted RBP14.33□□□□□ -0.12
CDX2-201ENST00000381020 FMN2Q9NZ56 1722 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 CAMTA2O94983 1202 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 TSGA10IPQ3SY00 556 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 PLA2G12BQ9BX93 195 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 CALM1P0DP23 149 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 CALM2P0DP24 149 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 CALM3P0DP25 149 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 NAPAP54920 295 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 HS1BP3Q53T59 392 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 RILPL1Q5EBL4 403 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 CLEC4GQ6UXB4 293 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 SEPT12Q8IYM1 358 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 RBM17Q96I25 401 aaKnown RBP14.32□□□□□ -0.12
CDX2-201ENST00000381020 PGBD1Q96JS3 809 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 SH2B2O14492 632 aaPredicted RBP14.32□□□□□ -0.12
CDX2-201ENST00000381020 NEDD4P46934 1319 aa14.32□□□□□ -0.12
CDX2-201ENST00000381020 PFKFB1P16118 471 aa14.31□□□□□ -0.12
CDX2-201ENST00000381020 STIM1Q13586 685 aa14.31□□□□□ -0.12
CDX2-201ENST00000381020 ARHGEF1Q92888 912 aaKnown RBP14.31□□□□□ -0.12
CDX2-201ENST00000381020 ZSCAN10Q96SZ4 725 aaPredicted RBP14.31□□□□□ -0.12
CDX2-201ENST00000381020 YEATS4O95619 227 aa14.31□□□□□ -0.12
CDX2-201ENST00000381020 NR5A1Q13285 461 aa14.31□□□□□ -0.12
CDX2-201ENST00000381020 RPS6KA4O75676 772 aa14.31□□□□□ -0.12
CDX2-201ENST00000381020 MB21D2Q8IYB1 491 aaPredicted RBP14.31□□□□□ -0.12
CDX2-201ENST00000381020 BSDC1Q9NW68 430 aaPredicted RBP14.31□□□□□ -0.12
CDX2-201ENST00000381020 IDEP14735 1019 aa14.31□□□□□ -0.12
CDX2-201ENST00000381020 INTS5Q6P9B9 1019 aaKnown RBP14.31□□□□□ -0.12
CDX2-201ENST00000381020 NOC3LQ8WTT2 800 aaKnown RBP14.31□□□□□ -0.12
CDX2-201ENST00000381020 RCOR1Q9UKL0 485 aa14.31□□□□□ -0.12
CDX2-201ENST00000381020 MRVI1Q9Y6F6 885 aa14.31□□□□□ -0.12
CDX2-201ENST00000381020 ELP1O95163 1332 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 APBA3O96018 575 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 EXOSC10Q01780 885 aaKnown RBP14.3□□□□□ -0.12
CDX2-201ENST00000381020 TMOD2Q9NZR1 351 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 TCEAL9Q9UHQ7 104 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 CAMTA1Q9Y6Y1 1673 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 HLA-DOAP06340 250 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 GOLGA8HP0CJ92 632 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 NOSTRINQ8IVI9 506 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 LINC00116Q8NCU8 138 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 PARP3Q9Y6F1 533 aa14.3□□□□□ -0.12
CDX2-201ENST00000381020 KIF23Q02241 960 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms