RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 CDC27P30260 824 aa17.59■□□□□ 0.41
SNX2-201ENST00000379516 WTAPQ15007 396 aa17.59■□□□□ 0.41
SNX2-201ENST00000379516 CCDC183Q5T5S1 534 aa17.59■□□□□ 0.41
SNX2-201ENST00000379516 CTR9Q6PD62 1173 aa17.59■□□□□ 0.41
SNX2-201ENST00000379516 CPLX2Q6PUV4 134 aaKnown RBP17.59■□□□□ 0.41
SNX2-201ENST00000379516 SYNE3Q6ZMZ3 975 aa17.59■□□□□ 0.41
SNX2-201ENST00000379516 ESR2Q92731 530 aa17.59■□□□□ 0.41
SNX2-201ENST00000379516 PODXL2Q9NZ53 605 aa17.59■□□□□ 0.41
SNX2-201ENST00000379516 CFAP45Q9UL16 551 aa17.59■□□□□ 0.41
SNX2-201ENST00000379516 USP17L12C9JPN9 530 aa17.59■□□□□ 0.41
SNX2-201ENST00000379516 USP17L21D6R901 530 aa17.59■□□□□ 0.41
SNX2-201ENST00000379516 CDKL5O76039 1030 aa17.59■□□□□ 0.41
SNX2-201ENST00000379516 CD209Q9NNX6 404 aa17.59■□□□□ 0.41
SNX2-201ENST00000379516 DCP1AQ9NPI6 582 aaPredicted RBP17.59■□□□□ 0.41
SNX2-201ENST00000379516 GOLGA6L4A6NEF3 574 aa17.58■□□□□ 0.4
SNX2-201ENST00000379516 PPEF1O14829 653 aaPredicted RBP17.58■□□□□ 0.4
SNX2-201ENST00000379516 OTUD7BQ6GQQ9 843 aa17.58■□□□□ 0.4
SNX2-201ENST00000379516 TBC1D16Q8TBP0 767 aa17.58■□□□□ 0.4
SNX2-201ENST00000379516 UBAC1Q9BSL1 405 aa17.58■□□□□ 0.4
SNX2-201ENST00000379516 MTA3Q9BTC8 594 aa17.58■□□□□ 0.4
SNX2-201ENST00000379516 ATP8A2Q9NTI2 1148 aa17.58■□□□□ 0.4
SNX2-201ENST00000379516 POLLQ9UGP5 575 aa17.58■□□□□ 0.4
SNX2-201ENST00000379516 C6orf229H3BNL8 230 aa17.57■□□□□ 0.4
SNX2-201ENST00000379516 NASPP49321 788 aaPredicted RBP17.57■□□□□ 0.4
SNX2-201ENST00000379516 RBSNQ9H1K0 784 aa17.57■□□□□ 0.4
SNX2-201ENST00000379516 PARP3Q9Y6F1 533 aa17.57■□□□□ 0.4
SNX2-201ENST00000379516 MMP10P09238 476 aa17.57■□□□□ 0.4
SNX2-201ENST00000379516 GSTO1P78417 241 aa17.57■□□□□ 0.4
SNX2-201ENST00000379516 GRIK5Q16478 980 aa17.57■□□□□ 0.4
SNX2-201ENST00000379516 TMC4Q7Z404 712 aa17.57■□□□□ 0.4
SNX2-201ENST00000379516 SP8Q8IXZ3 490 aa17.57■□□□□ 0.4
SNX2-201ENST00000379516 TMTC2Q8N394 836 aa17.57■□□□□ 0.4
SNX2-201ENST00000379516 FBXO18Q8NFZ0 1043 aa17.57■□□□□ 0.4
SNX2-201ENST00000379516 FAM217BQ9NTX9 383 aaPredicted RBP17.57■□□□□ 0.4
SNX2-201ENST00000379516 CHD4Q14839 1912 aa17.57■□□□□ 0.4
SNX2-201ENST00000379516 IGSF3O75054 1194 aa17.56■□□□□ 0.4
SNX2-201ENST00000379516 IL1R1P14778 569 aa17.56■□□□□ 0.4
SNX2-201ENST00000379516 CEBPZQ03701 1054 aaKnown RBP17.56■□□□□ 0.4
SNX2-201ENST00000379516 PHKBQ93100 1093 aa17.56■□□□□ 0.4
SNX2-201ENST00000379516 PRDM1O75626 825 aa17.56■□□□□ 0.4
SNX2-201ENST00000379516 LETM1O95202 739 aaPredicted RBP17.56■□□□□ 0.4
SNX2-201ENST00000379516 SRGNP10124 158 aa17.56■□□□□ 0.4
SNX2-201ENST00000379516 DIXDC1Q155Q3 683 aa17.56■□□□□ 0.4
SNX2-201ENST00000379516 MSL1Q68DK7 614 aa17.56■□□□□ 0.4
SNX2-201ENST00000379516 ZNF396Q96N95 335 aaPredicted RBP17.56■□□□□ 0.4
SNX2-201ENST00000379516 GJB4Q9NTQ9 266 aa17.56■□□□□ 0.4
SNX2-201ENST00000379516 TNKSO95271 1327 aa17.55■□□□□ 0.4
SNX2-201ENST00000379516 RANBP6O60518 1105 aaKnown RBP17.55■□□□□ 0.4
SNX2-201ENST00000379516 PCP11498 1178 aaKnown RBP17.55■□□□□ 0.4
SNX2-201ENST00000379516 NPR1P16066 1061 aa17.55■□□□□ 0.4
SNX2-201ENST00000379516 IARSP41252 1262 aaKnown RBP17.55■□□□□ 0.4
SNX2-201ENST00000379516 NTRK3Q16288 839 aa17.55■□□□□ 0.4
SNX2-201ENST00000379516 ALG1Q9BT22 464 aa17.55■□□□□ 0.4
SNX2-201ENST00000379516 MAST2Q6P0Q8 1798 aa17.55■□□□□ 0.4
SNX2-201ENST00000379516 FGRP09769 529 aa17.54■□□□□ 0.4
SNX2-201ENST00000379516 EVX2Q03828 476 aa17.54■□□□□ 0.4
SNX2-201ENST00000379516 ILDR1Q86SU0 546 aaPredicted RBP17.54■□□□□ 0.4
SNX2-201ENST00000379516 TSPY26PQ9H489 355 aa17.54■□□□□ 0.4
SNX2-201ENST00000379516 ARPP21Q9UBL0 812 aaPredicted RBP17.54■□□□□ 0.4
SNX2-201ENST00000379516 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
SNX2-201ENST00000379516 ATP6V0A2Q9Y487 856 aa17.54■□□□□ 0.4
SNX2-201ENST00000379516 BAG3O95817 575 aa17.54■□□□□ 0.4
SNX2-201ENST00000379516 LDHCP07864 332 aa17.54■□□□□ 0.4
SNX2-201ENST00000379516 PDE6BP35913 854 aa17.54■□□□□ 0.4
SNX2-201ENST00000379516 USP5P45974 858 aa17.54■□□□□ 0.4
SNX2-201ENST00000379516 ATL3Q6DD88 541 aa17.54■□□□□ 0.4
SNX2-201ENST00000379516 AIFM3Q96NN9 605 aa17.54■□□□□ 0.4
SNX2-201ENST00000379516 ZSCAN10Q96SZ4 725 aaPredicted RBP17.54■□□□□ 0.4
SNX2-201ENST00000379516 NOL10Q9BSC4 688 aaKnown RBP17.54■□□□□ 0.4
SNX2-201ENST00000379516 FTOQ9C0B1 505 aaKnown RBP eCLIP17.54■□□□□ 0.4
SNX2-201ENST00000379516 MCM9Q9NXL9 1143 aa17.54■□□□□ 0.4
SNX2-201ENST00000379516 SLC3A2P08195 630 aaKnown RBP17.53■□□□□ 0.4
SNX2-201ENST00000379516 CYP2D6P10635 497 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 LIG1P18858 919 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 SEC23AQ15436 765 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 RTN1Q16799 776 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 SBK1Q52WX2 424 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 ZNF654Q8IZM8 581 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 SH3RF3Q8TEJ3 882 aaPredicted RBP17.53■□□□□ 0.4
SNX2-201ENST00000379516 NUP133Q8WUM0 1156 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 PGBD1Q96JS3 809 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 USP28Q96RU2 1077 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 CCDC88AQ3V6T2 1871 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 ALDH1B1P30837 517 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 SSRP1Q08945 709 aaKnown RBP17.53■□□□□ 0.4
SNX2-201ENST00000379516 IQCA1Q86XH1 822 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 SLC26A6Q9BXS9 759 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 RCOR1Q9UKL0 485 aa17.53■□□□□ 0.4
SNX2-201ENST00000379516 DUOX1Q9NRD9 1551 aa17.52■□□□□ 0.4
SNX2-201ENST00000379516 BAZ2AQ9UIF9 1905 aaKnown RBP17.52■□□□□ 0.4
SNX2-201ENST00000379516 RIMBP2O15034 1052 aa17.52■□□□□ 0.4
SNX2-201ENST00000379516 POLR3DP05423 398 aaPredicted RBP17.52■□□□□ 0.4
SNX2-201ENST00000379516 ENAHQ8N8S7 591 aaPredicted RBP17.52■□□□□ 0.4
SNX2-201ENST00000379516 BICD2Q8TD16 824 aa17.52■□□□□ 0.4
SNX2-201ENST00000379516 ANP32BQ92688 251 aaKnown RBP17.52■□□□□ 0.4
SNX2-201ENST00000379516 RGS17Q9UGC6 210 aaPredicted RBP17.52■□□□□ 0.4
SNX2-201ENST00000379516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.52■□□□□ 0.4
SNX2-201ENST00000379516 NID2Q14112 1375 aa17.52■□□□□ 0.4
SNX2-201ENST00000379516 MROH7-TTC4A0A0A0MT08 1334 aa17.52■□□□□ 0.39
SNX2-201ENST00000379516 CCDC196A0A1B0GTZ2 297 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms