RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 DRP2Q13474 957 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 MORC2Q9Y6X9 1032 aaPredicted RBP11.25□□□□□ -0.61
SIM1-202ENST00000369208 DKC1O60832 514 aaKnown RBP eCLIP11.24□□□□□ -0.61
SIM1-202ENST00000369208 CUL3Q13618 768 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 TMEM57Q8N5G2 664 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 A0A1W2PRG0 241 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 TMEM232C9JQI7 657 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 KIF22Q14807 665 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 GKAP1Q5VSY0 366 aaPredicted RBP11.24□□□□□ -0.61
SIM1-202ENST00000369208 LCA5Q86VQ0 697 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 CAPS2Q9BXY5 557 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 TUBA8Q9NY65 449 aaPredicted RBP11.24□□□□□ -0.61
SIM1-202ENST00000369208 ACEP12821 1306 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 DEUP1Q05D60 604 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 MTMR3Q13615 1198 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 ATP2B3Q16720 1220 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 TRIM58Q8NG06 486 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 INTS4Q96HW7 963 aaKnown RBP11.24□□□□□ -0.61
SIM1-202ENST00000369208 WDR70Q9NW82 654 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 LMNAP02545 664 aaKnown RBP11.24□□□□□ -0.61
SIM1-202ENST00000369208 SKIP12755 728 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 SYT1P21579 422 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 HNRNPH2P55795 449 aaKnown RBP11.24□□□□□ -0.61
SIM1-202ENST00000369208 SNX16P57768 344 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 PRXQ9BXM0 1461 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 CYP7A1P22680 504 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 IL15P40933 162 aaPredicted RBP11.24□□□□□ -0.61
SIM1-202ENST00000369208 SFSWAPQ12872 951 aaKnown RBP11.24□□□□□ -0.61
SIM1-202ENST00000369208 NEK11Q8NG66 645 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 GLT8D2Q9H1C3 349 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 CHMP2AO43633 222 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 CCDC80Q76M96 950 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 STK24Q9Y6E0 443 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 ATP2C2O75185 946 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 AKAP4Q5JQC9 854 aa11.24□□□□□ -0.61
SIM1-202ENST00000369208 CAPRIN2Q6IMN6 1127 aaKnown RBP11.23□□□□□ -0.61
SIM1-202ENST00000369208 IFT20Q8IY31 132 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 IL16Q14005 1332 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 GAS8O95995 478 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 LIG3P49916 1009 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 UBASH3AP57075 661 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 ANO6Q4KMQ2 910 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 TTC6Q86TZ1 520 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 NME8Q8N427 588 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 RABGGTAQ92696 567 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 ZBTB16Q05516 673 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 E2F4Q16254 413 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 FLAD1Q8NFF5 587 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 SPC25Q9HBM1 224 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 POLE3Q9NRF9 147 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 UTP6Q9NYH9 597 aaKnown RBP11.23□□□□□ -0.61
SIM1-202ENST00000369208 NOC2LQ9Y3T9 749 aaKnown RBP11.23□□□□□ -0.61
SIM1-202ENST00000369208 YY1P25490 414 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 PSMD2Q13200 908 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 MUM1L1Q5H9M0 696 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 ARHGEF10LQ9HCE6 1279 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 UHRF1BP1Q6BDS2 1440 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 FYB2Q5VWT5 728 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 DZIP3Q86Y13 1208 aaKnown RBP11.23□□□□□ -0.61
SIM1-202ENST00000369208 NOP53Q9NZM5 478 aaKnown RBP11.23□□□□□ -0.61
SIM1-202ENST00000369208 CAMK4Q16566 473 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 OLFM3Q96PB7 478 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 CCDC8Q9H0W5 538 aaPredicted RBP11.23□□□□□ -0.61
SIM1-202ENST00000369208 CCDC87Q9NVE4 849 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 PPP1R9AQ9ULJ8 1098 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 AK9Q5TCS8 1911 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 NOS1P29475 1434 aa11.23□□□□□ -0.61
SIM1-202ENST00000369208 ERCC6LQ2NKX8 1250 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 ACSBG1Q96GR2 724 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 ALDH1L1O75891 902 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 PTGS1P23219 599 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 GNA11P29992 359 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 CNBD1Q8NA66 436 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 SIRT1Q96EB6 747 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 ZNF830Q96NB3 372 aaPredicted RBP11.22□□□□□ -0.61
SIM1-202ENST00000369208 SPAG5Q96R06 1193 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 DUOX2Q9NRD8 1548 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 RALGAPBQ86X10 1494 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 RASSF10A6NK89 507 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 ATL3Q6DD88 541 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 CCDC62Q6P9F0 684 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 IFT81Q8WYA0 676 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 CDCA7LQ96GN5 454 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 LDHBP07195 334 aaKnown RBP11.22□□□□□ -0.61
SIM1-202ENST00000369208 TYRO3Q06418 890 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 SPAG1Q07617 926 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 CHRNA2Q15822 529 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 FBXO31Q5XUX0 539 aaPredicted RBP11.22□□□□□ -0.61
SIM1-202ENST00000369208 PNMA8AQ86V59 439 aaPredicted RBP11.22□□□□□ -0.61
SIM1-202ENST00000369208 HACE1Q8IYU2 909 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 PALMDQ9NP74 551 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 EIF3CLB5ME19 914 aaKnown RBP11.22□□□□□ -0.61
SIM1-202ENST00000369208 EIF3CQ99613 913 aaKnown RBP11.22□□□□□ -0.61
SIM1-202ENST00000369208 USP16Q9Y5T5 823 aa11.22□□□□□ -0.61
SIM1-202ENST00000369208 SOS1Q07889 1333 aaPredicted RBP11.21□□□□□ -0.61
SIM1-202ENST00000369208 MAGEB6P1A0A0J9YX57 407 aa11.21□□□□□ -0.61
SIM1-202ENST00000369208 PARP10Q53GL7 1025 aa11.21□□□□□ -0.61
SIM1-202ENST00000369208 GABPB2Q8TAK5 448 aaPredicted RBP11.21□□□□□ -0.61
SIM1-202ENST00000369208 TTF2Q9UNY4 1162 aaKnown RBP11.21□□□□□ -0.61
SIM1-202ENST00000369208 GFAPP14136 432 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms