RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 CTAGE4Q8IX94 777 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 MRPL50Q8N5N7 158 aaKnown RBP12.27□□□□□ -0.44
CLIP1-203ENST00000361654 FAM200AQ8TCP9 573 aa12.27□□□□□ -0.44
CLIP1-203ENST00000361654 LEO1Q8WVC0 666 aaPredicted RBP12.27□□□□□ -0.44
CLIP1-203ENST00000361654 ZNF830Q96NB3 372 aaPredicted RBP12.27□□□□□ -0.44
CLIP1-203ENST00000361654 MKRN1Q9UHC7 482 aaKnown RBP12.27□□□□□ -0.45
CLIP1-203ENST00000361654 TCP10Q12799 353 aa12.27□□□□□ -0.45
CLIP1-203ENST00000361654 PPP2R5BQ15173 497 aa12.27□□□□□ -0.45
CLIP1-203ENST00000361654 PPP1R7Q15435 360 aa12.27□□□□□ -0.45
CLIP1-203ENST00000361654 TCEANC2Q96MN5 208 aa12.27□□□□□ -0.45
CLIP1-203ENST00000361654 GDPD2Q9HCC8 539 aa12.27□□□□□ -0.45
CLIP1-203ENST00000361654 PFDN4Q9NQP4 134 aa12.27□□□□□ -0.45
CLIP1-203ENST00000361654 DEXIO95424 95 aa12.27□□□□□ -0.45
CLIP1-203ENST00000361654 C8orf58Q8NAV2 365 aa12.27□□□□□ -0.45
CLIP1-203ENST00000361654 QTRT2Q9H974 415 aaKnown RBP12.27□□□□□ -0.45
CLIP1-203ENST00000361654 A0A1B0GUL7 405 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 PRPF6O94906 941 aaKnown RBP12.26□□□□□ -0.45
CLIP1-203ENST00000361654 ERCC5P28715 1186 aaPredicted RBP12.26□□□□□ -0.45
CLIP1-203ENST00000361654 NUCB1Q02818 461 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 GADL1Q6ZQY3 521 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 KRT25Q7Z3Z0 450 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 TMX3Q96JJ7 454 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 POLR3GO15318 223 aaPredicted RBP12.26□□□□□ -0.45
CLIP1-203ENST00000361654 TNFAIP3P21580 790 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 ATP2B4P23634 1241 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 UBXN1Q04323 297 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 GEN1Q17RS7 908 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 BICC1Q9H694 974 aaKnown RBP12.26□□□□□ -0.45
CLIP1-203ENST00000361654 SERPINA10Q9UK55 444 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 ZFYVE9O95405 1425 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 PTGS1P23219 599 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 RILPL1Q5EBL4 403 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 CNNM4Q6P4Q7 775 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 TIGD1Q96MW7 591 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 USP40Q9NVE5 1235 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 RTL1A6NKG5 1358 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 RPS8P62241 208 aaKnown RBP12.26□□□□□ -0.45
CLIP1-203ENST00000361654 ELMSAN1Q6PJG2 1045 aa12.26□□□□□ -0.45
CLIP1-203ENST00000361654 CETN3O15182 167 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 CFBP00751 764 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 GPR161Q8N6U8 529 aaKnown RBP12.25□□□□□ -0.45
CLIP1-203ENST00000361654 NCAPH2Q6IBW4 605 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 NAP1L3Q99457 506 aaPredicted RBP12.25□□□□□ -0.45
CLIP1-203ENST00000361654 TTF2Q9UNY4 1162 aaKnown RBP12.25□□□□□ -0.45
CLIP1-203ENST00000361654 DNM3Q9UQ16 869 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 KRT9P35527 623 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 CCDC6Q16204 474 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 ZBTB8OSQ8IWT0 167 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 IWS1Q96ST2 819 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 ADPGKQ9BRR6 497 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 ATF7P17544 494 aaPredicted RBP12.25□□□□□ -0.45
CLIP1-203ENST00000361654 NONOQ15233 471 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLIP1-203ENST00000361654 MSL1Q68DK7 614 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 ATL3Q6DD88 541 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 FAM196AQ6ZSG2 479 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 RSPH3Q86UC2 560 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 RNF169Q8NCN4 708 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 CCDC110Q8TBZ0 833 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 AATFQ9NY61 560 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLIP1-203ENST00000361654 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
CLIP1-203ENST00000361654 ABCC1P33527 1531 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 MAP3K19Q56UN5 1328 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 TUBB4AP04350 444 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 KIF11P52732 1056 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 APOBRQ0VD83 1088 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 CUL4BQ13620 913 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 AFAP1L2Q8N4X5 818 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 CCDC94Q9BW85 323 aaPredicted RBP12.24□□□□□ -0.45
CLIP1-203ENST00000361654 LUC7L2Q9Y383 392 aaKnown RBP12.24□□□□□ -0.45
CLIP1-203ENST00000361654 KRT19P08727 400 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 TPD52P55327 224 aaPredicted RBP12.24□□□□□ -0.45
CLIP1-203ENST00000361654 APPBP2Q92624 585 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 TRIM7Q9C029 511 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 ARMT1Q9H993 441 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 SLC52A2Q9HAB3 445 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 ERVV-2B6SEH9 535 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 DYNC1I1O14576 645 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 SPOPO43791 374 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 ZEB2O60315 1214 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 GTF2IP78347 998 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 C16orf45Q96MC5 204 aaPredicted RBP12.24□□□□□ -0.45
CLIP1-203ENST00000361654 IBTKQ9P2D0 1353 aaPredicted RBP12.24□□□□□ -0.45
CLIP1-203ENST00000361654 ZKSCAN3Q9BRR0 538 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 DDX39AO00148 427 aaKnown RBP12.24□□□□□ -0.45
CLIP1-203ENST00000361654 OPA1O60313 960 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 ADCY5O95622 1261 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 IGHDP01880 384 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 CD19P15391 556 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 TMOD1P28289 359 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 TNNC1P63316 161 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 CLUL1Q15846 466 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 CREB3L3Q68CJ9 461 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 CDC37L1Q7L3B6 337 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 MCF2L2Q86YR7 1114 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 DNAJC10Q8IXB1 793 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 DEPTORQ8TB45 409 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 XAGE2Q96GT9 111 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 ORAI2Q96SN7 254 aa12.24□□□□□ -0.45
CLIP1-203ENST00000361654 VWA3AA6NCI4 1184 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms