RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 CDKL5O76039 1030 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 SYT1P21579 422 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 SH3GL3Q99963 347 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 TCHPQ9BT92 498 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 DACH1Q9UI36 760 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 CYP2E1P05181 493 aaPredicted RBP11.28□□□□□ -0.6
SIN3A-201ENST00000360439 ATP2B1P20020 1258 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 TIMM10P62072 90 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 STK3Q13188 491 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 RBM8AQ9Y5S9 174 aaKnown RBP11.28□□□□□ -0.6
SIN3A-201ENST00000360439 RPS6KA4O75676 772 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 PXDNLA1KZ92 1463 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 SLIT1O75093 1534 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 NEURL1BA8MQ27 555 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 HIBADHP31937 336 aaKnown RBP11.28□□□□□ -0.6
SIN3A-201ENST00000360439 ME1P48163 572 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 SLC27A3Q5K4L6 730 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 GIGYF2Q6Y7W6 1299 aaKnown RBP11.28□□□□□ -0.6
SIN3A-201ENST00000360439 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 SUPT20HQ8NEM7 779 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 MICAL1Q8TDZ2 1067 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 UBAP1Q9NZ09 502 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 HEG1Q9ULI3 1381 aa11.28□□□□□ -0.6
SIN3A-201ENST00000360439 SHTN1A0MZ66 631 aa11.27□□□□□ -0.6
SIN3A-201ENST00000360439 ERLIN2O94905 339 aa11.27□□□□□ -0.6
SIN3A-201ENST00000360439 IRX1P78414 480 aaPredicted RBP11.27□□□□□ -0.6
SIN3A-201ENST00000360439 DPY19L2Q6NUT2 758 aa11.27□□□□□ -0.6
SIN3A-201ENST00000360439 MICALCLQ6ZW33 695 aa11.27□□□□□ -0.6
SIN3A-201ENST00000360439 SUCLG2Q96I99 432 aa11.27□□□□□ -0.6
SIN3A-201ENST00000360439 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.27□□□□□ -0.6
SIN3A-201ENST00000360439 TECPR2O15040 1411 aa11.27□□□□□ -0.61
SIN3A-201ENST00000360439 EYA2O00167 538 aa11.27□□□□□ -0.61
SIN3A-201ENST00000360439 EAPPQ56P03 285 aaPredicted RBP11.27□□□□□ -0.61
SIN3A-201ENST00000360439 GIMAP6Q6P9H5 292 aa11.27□□□□□ -0.61
SIN3A-201ENST00000360439 PDLIM2Q96JY6 352 aa11.27□□□□□ -0.61
SIN3A-201ENST00000360439 TRIM4Q9C037 500 aa11.27□□□□□ -0.61
SIN3A-201ENST00000360439 CABP5Q9NP86 173 aa11.27□□□□□ -0.61
SIN3A-201ENST00000360439 PTPN14Q15678 1187 aa11.27□□□□□ -0.61
SIN3A-201ENST00000360439 CAMK4Q16566 473 aa11.27□□□□□ -0.61
SIN3A-201ENST00000360439 GET4Q7L5D6 327 aaPredicted RBP11.27□□□□□ -0.61
SIN3A-201ENST00000360439 FAM177A1Q8N128 213 aaPredicted RBP11.27□□□□□ -0.61
SIN3A-201ENST00000360439 ATL2Q8NHH9 583 aa11.27□□□□□ -0.61
SIN3A-201ENST00000360439 CTNNBL1Q8WYA6 563 aaPredicted RBP11.27□□□□□ -0.61
SIN3A-201ENST00000360439 LDHBP07195 334 aaKnown RBP11.27□□□□□ -0.61
SIN3A-201ENST00000360439 SLC9C2Q5TAH2 1124 aa11.27□□□□□ -0.61
SIN3A-201ENST00000360439 RSRC1Q96IZ7 334 aaKnown RBP11.27□□□□□ -0.61
SIN3A-201ENST00000360439 SSBP05455 408 aaKnown RBP eCLIP11.26□□□□□ -0.61
SIN3A-201ENST00000360439 SMIM5Q71RC9 77 aa11.26□□□□□ -0.61
SIN3A-201ENST00000360439 FILIP1Q7Z7B0 1213 aa11.26□□□□□ -0.61
SIN3A-201ENST00000360439 NEK1Q96PY6 1258 aa11.26□□□□□ -0.61
SIN3A-201ENST00000360439 CRNKL1Q9BZJ0 848 aaKnown RBP11.26□□□□□ -0.61
SIN3A-201ENST00000360439 DNM1Q05193 864 aaKnown RBP11.26□□□□□ -0.61
SIN3A-201ENST00000360439 TYRO3Q06418 890 aa11.26□□□□□ -0.61
SIN3A-201ENST00000360439 CREB3L3Q68CJ9 461 aa11.26□□□□□ -0.61
SIN3A-201ENST00000360439 CCDC150Q8NCX0 1101 aa11.26□□□□□ -0.61
SIN3A-201ENST00000360439 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.26□□□□□ -0.618e-7■■■■■ 251.4
SIN3A-201ENST00000360439 ARHGAP23Q9P227 1491 aa11.26□□□□□ -0.61
SIN3A-201ENST00000360439 CCDC114Q96M63 670 aa11.26□□□□□ -0.61
SIN3A-201ENST00000360439 SH3BGRP55822 239 aaPredicted RBP11.26□□□□□ -0.61
SIN3A-201ENST00000360439 ZBTB38Q8NAP3 1195 aaPredicted RBP11.26□□□□□ -0.61
SIN3A-201ENST00000360439 FAM210AQ96ND0 272 aa11.26□□□□□ -0.61
SIN3A-201ENST00000360439 FRMD4BQ9Y2L6 1034 aa11.26□□□□□ -0.61
SIN3A-201ENST00000360439 ZNF213O14771 459 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 ZNF165P49910 485 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 LRRC23Q53EV4 343 aaPredicted RBP11.25□□□□□ -0.61
SIN3A-201ENST00000360439 C3P01024 1663 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 PNMA6EA0A0J9YXQ4 647 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 CTSWP56202 376 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 ARMC2Q8NEN0 867 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 MIPOL1Q8TD10 442 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 SPON1Q9HCB6 807 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 CHCHD3Q9NX63 227 aaKnown RBP11.25□□□□□ -0.61
SIN3A-201ENST00000360439 SCP2P22307 547 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 EZH2Q15910 746 aaKnown RBP11.25□□□□□ -0.61
SIN3A-201ENST00000360439 ITSN1Q15811 1721 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 LIG3P49916 1009 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 PUM3Q15397 648 aaKnown RBP11.25□□□□□ -0.61
SIN3A-201ENST00000360439 CCDC96Q2M329 555 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 MMS22LQ6ZRQ5 1243 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
SIN3A-201ENST00000360439 TMEM165Q9HC07 324 aa11.25□□□□□ -0.61
SIN3A-201ENST00000360439 HAND2P61296 217 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 NEDD9Q14511 834 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 ERFEQ4G0M1 354 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 FERMT3Q86UX7 667 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 MIGA1Q8NAN2 632 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 CD163L1Q9NR16 1453 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 GOLGA6CA6NDK9 693 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 GOLGA6BA6NDN3 693 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 GOLGA6DP0CG33 693 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 ANO6Q4KMQ2 910 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 TRIM22Q8IYM9 498 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 WDR66Q8TBY9 1149 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 ZMAT2Q96NC0 199 aaKnown RBP11.24□□□□□ -0.61
SIN3A-201ENST00000360439 LLPHQ9BRT6 129 aaKnown RBP11.24□□□□□ -0.61
SIN3A-201ENST00000360439 TRMT1Q9NXH9 659 aaKnown RBP11.24□□□□□ -0.61
SIN3A-201ENST00000360439 GOLGA6AQ9NYA3 693 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 VPS18Q9P253 973 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 ODF2LQ9ULJ1 636 aa11.24□□□□□ -0.61
SIN3A-201ENST00000360439 NMIQ13287 307 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms