RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ACRBPQ8NEB7 543 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 DBNDD2Q9BQY9 259 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 SUFUQ9UMX1 484 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 GUCA1BQ9UMX6 200 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 PRR36Q9H6K5 1346 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 ADAMTS13Q76LX8 1427 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 GOLGA6CA6NDK9 693 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 KIF28PB7ZC32 967 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 GOLGA6DP0CG33 693 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 HNRNPH1P31943 449 aaKnown RBP8.68□□□□□ -1.02
BRCA1-201ENST00000352993 PSEN1P49768 467 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 TRIM29Q14134 588 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 PROSER3Q2NL68 480 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 RAD9BQ6WBX8 426 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 RALYLQ86SE5 291 aaKnown RBP8.68□□□□□ -1.02
BRCA1-201ENST00000352993 CTCFLQ8NI51 663 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-201ENST00000352993 GOLGA6AQ9NYA3 693 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 KCNH3Q9ULD8 1083 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 ADGRG1Q9Y653 693 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 EXOC5O00471 708 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 DDX58O95786 925 aaKnown RBP8.67□□□□□ -1.02
BRCA1-201ENST00000352993 RXRAP19793 462 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 EIF4A1P60842 406 aaKnown RBP8.67□□□□□ -1.02
BRCA1-201ENST00000352993 RBL2Q08999 1139 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 NEXNQ0ZGT2 675 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 TRDNQ13061 729 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 WASHC4Q2M389 1173 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 FILIP1LQ4L180 1135 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 PLEKHO1Q53GL0 409 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-201ENST00000352993 KSR2Q6VAB6 950 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 MPRIPQ6WCQ1 1025 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 SUGP1Q8IWZ8 645 aaKnown RBP8.67□□□□□ -1.02
BRCA1-201ENST00000352993 GSPT2Q8IYD1 628 aaKnown RBP8.67□□□□□ -1.02
BRCA1-201ENST00000352993 MSANTD4Q8NCY6 345 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.67□□□□□ -1.02
BRCA1-201ENST00000352993 DACH1Q9UI36 760 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 DBNLQ9UJU6 430 aaKnown RBP8.67□□□□□ -1.02
BRCA1-201ENST00000352993 RAB21Q9UL25 225 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 ENC1O14682 589 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 CDC27P30260 824 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 AIFM3Q96NN9 605 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 FLT4P35916 1363 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 TEX33O43247 280 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 MYL6BP14649 208 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 USP5P45974 858 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 SLC39A14Q15043 492 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 FKBP15Q5T1M5 1219 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 NUTM2AQ8IVF1 878 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-201ENST00000352993 ZNF274Q96GC6 653 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-201ENST00000352993 CEP89Q96ST8 783 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 RUFY1Q96T51 708 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 ALG1Q9BT22 464 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 MYO6Q9UM54 1294 aa8.67□□□□□ -1.02
BRCA1-201ENST00000352993 GGCXP38435 758 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 GNGT1P63211 74 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 RNF187Q5TA31 235 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-201ENST00000352993 SHC4Q6S5L8 630 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 GRAMD1CQ8IYS0 662 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 OTUD6BQ8N6M0 293 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 NUP88Q99567 741 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-201ENST00000352993 SLF1Q9BQI6 1058 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 EHD4Q9H223 541 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 TUBE1Q9UJT0 475 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 COL15A1P39059 1388 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 ATP5JP18859 108 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 TUBB4BP68371 445 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 FMR1Q06787 632 aaKnown RBP eCLIP8.66□□□□□ -1.02
BRCA1-201ENST00000352993 WHAMMP3Q1A5X7 153 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 METTL16Q86W50 562 aaKnown RBP8.66□□□□□ -1.02
BRCA1-201ENST00000352993 DHX37Q8IY37 1157 aaKnown RBP8.66□□□□□ -1.02
BRCA1-201ENST00000352993 KAT2BQ92831 832 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 KAT14Q9H8E8 782 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 POLR2DO15514 142 aaKnown RBP8.66□□□□□ -1.02
BRCA1-201ENST00000352993 PRC1O43663 620 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 ZEB2O60315 1214 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 CASP14P31944 242 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 CCT6AP40227 531 aaKnown RBP8.66□□□□□ -1.02
BRCA1-201ENST00000352993 MMP14P50281 582 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 KIF23Q02241 960 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-201ENST00000352993 HSP90AB3PQ58FF7 597 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 TNNI3KQ59H18 835 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 THEMISQ8N1K5 641 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-201ENST00000352993 FPGT-TNNI3KV9GXZ4 949 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 PXDNLA1KZ92 1463 aa8.66□□□□□ -1.02
BRCA1-201ENST00000352993 ZNF609O15014 1411 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 COBLO75128 1261 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 TUBBP07437 444 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 PPARDQ03181 441 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 TTC39AQ5SRH9 613 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 CPLX2Q6PUV4 134 aaKnown RBP8.65□□□□□ -1.02
BRCA1-201ENST00000352993 VPS37DQ86XT2 251 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 FOXP4Q8IVH2 680 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-201ENST00000352993 LINS1Q8NG48 757 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 SNRKQ9NRH2 765 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 IGSF1Q8N6C5 1336 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 FMN2Q9NZ56 1722 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 GOLGA6BA6NDN3 693 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 NDUFAB1O14561 156 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 AFMP43652 599 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 FKBP4Q02790 459 aaKnown RBP eCLIP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms