RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 NCOA7Q8NI08 942 aa17.12■□□□□ 0.33
PBX3-201ENST00000342287 TMX4Q9H1E5 349 aaPredicted RBP17.12■□□□□ 0.33
PBX3-201ENST00000342287 YY1AP1Q9H869 796 aa17.12■□□□□ 0.33
PBX3-201ENST00000342287 ZNF384Q8TF68 577 aa17.12■□□□□ 0.33
PBX3-201ENST00000342287 ANKRD7Q92527 254 aa17.12■□□□□ 0.33
PBX3-201ENST00000342287 EPB41L4AQ9HCS5 686 aaPredicted RBP17.12■□□□□ 0.33
PBX3-201ENST00000342287 CD209Q9NNX6 404 aa17.12■□□□□ 0.33
PBX3-201ENST00000342287 SMC3Q9UQE7 1217 aa17.12■□□□□ 0.33
PBX3-201ENST00000342287 H0YIN7 160 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 PRKAB2O43741 272 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 IL1R1P14778 569 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 TRDNQ13061 729 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 PKP1Q13835 747 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 RALYLQ86SE5 291 aaKnown RBP17.11■□□□□ 0.33
PBX3-201ENST00000342287 C2CD5Q86YS7 1000 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 PIBF1Q8WXW3 757 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 AGXT2Q9BYV1 514 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 TSPYL1Q9H0U9 437 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 PRDX5P30044 214 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 CLEC17AQ6ZS10 378 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 FBXL16Q8N461 479 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 NECAB1Q8N987 351 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 BRF1Q92994 677 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 ZNF622Q969S3 477 aaKnown RBP eCLIP17.11■□□□□ 0.33
PBX3-201ENST00000342287 RIOK1Q9BRS2 568 aaKnown RBP17.11■□□□□ 0.33
PBX3-201ENST00000342287 RIOK3O14730 519 aaKnown RBP17.11■□□□□ 0.33
PBX3-201ENST00000342287 AXDND1Q5T1B0 1012 aaPredicted RBP17.11■□□□□ 0.33
PBX3-201ENST00000342287 LRRC2Q9BYS8 371 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 FEZ2Q9UHY8 353 aaPredicted RBP17.11■□□□□ 0.33
PBX3-201ENST00000342287 JAG2Q9Y219 1238 aa17.11■□□□□ 0.33
PBX3-201ENST00000342287 TDO2P48775 406 aa17.1■□□□□ 0.33
PBX3-201ENST00000342287 STYK1Q6J9G0 422 aa17.1■□□□□ 0.33
PBX3-201ENST00000342287 NBPF3Q9H094 633 aa17.1■□□□□ 0.33
PBX3-201ENST00000342287 QSER1Q2KHR3 1735 aa17.1■□□□□ 0.33
PBX3-201ENST00000342287 LDHBP07195 334 aaKnown RBP17.1■□□□□ 0.33
PBX3-201ENST00000342287 MB21D2Q8IYB1 491 aaPredicted RBP17.1■□□□□ 0.33
PBX3-201ENST00000342287 ZDHHC9Q9Y397 364 aa17.1■□□□□ 0.33
PBX3-201ENST00000342287 CACNA1SQ13698 1873 aa17.09■□□□□ 0.33
PBX3-201ENST00000342287 ST3GAL1Q11201 340 aa17.09■□□□□ 0.33
PBX3-201ENST00000342287 DZIP1Q86YF9 867 aaKnown RBP17.09■□□□□ 0.33
PBX3-201ENST00000342287 TMX1Q9H3N1 280 aa17.09■□□□□ 0.33
PBX3-201ENST00000342287 LRRC37AA6NMS7 1700 aa17.09■□□□□ 0.33
PBX3-201ENST00000342287 CHST3Q7LGC8 479 aa17.09■□□□□ 0.33
PBX3-201ENST00000342287 CCDC125Q86Z20 511 aa17.09■□□□□ 0.33
PBX3-201ENST00000342287 TBC1D10CQ8IV04 446 aa17.09■□□□□ 0.33
PBX3-201ENST00000342287 MYH13Q9UKX3 1938 aa17.08■□□□□ 0.33
PBX3-201ENST00000342287 WDR19Q8NEZ3 1342 aa17.08■□□□□ 0.33
PBX3-201ENST00000342287 SYCE3A1L190 88 aa17.08■□□□□ 0.33
PBX3-201ENST00000342287 BRD1O95696 1058 aa17.08■□□□□ 0.33
PBX3-201ENST00000342287 DYNLL1P63167 89 aaKnown RBP17.08■□□□□ 0.33
PBX3-201ENST00000342287 DPP8Q6V1X1 898 aaPredicted RBP17.08■□□□□ 0.33
PBX3-201ENST00000342287 STK3Q13188 491 aa17.08■□□□□ 0.32
PBX3-201ENST00000342287 CNKSR2Q8WXI2 1034 aa17.08■□□□□ 0.32
PBX3-201ENST00000342287 TTC12Q9H892 705 aaPredicted RBP17.08■□□□□ 0.32
PBX3-201ENST00000342287 PRC1O43663 620 aa17.07■□□□□ 0.32
PBX3-201ENST00000342287 GJB2P29033 226 aa17.07■□□□□ 0.32
PBX3-201ENST00000342287 GSTO1P78417 241 aa17.07■□□□□ 0.32
PBX3-201ENST00000342287 SDR42E1Q8WUS8 393 aa17.07■□□□□ 0.32
PBX3-201ENST00000342287 ZC3H12CQ9C0D7 883 aaKnown RBP17.07■□□□□ 0.32
PBX3-201ENST00000342287 SLC16A10Q8TF71 515 aa17.07■□□□□ 0.32
PBX3-201ENST00000342287 GTF3C6Q969F1 213 aa17.07■□□□□ 0.32
PBX3-201ENST00000342287 COA1Q9GZY4 146 aa17.07■□□□□ 0.32
PBX3-201ENST00000342287 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
PBX3-201ENST00000342287 APOBRQ0VD83 1088 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 GIMAP6Q6P9H5 292 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 OLFM4Q6UX06 510 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 CNKSR1Q969H4 720 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 ZNF274Q96GC6 653 aaPredicted RBP17.06■□□□□ 0.32
PBX3-201ENST00000342287 PDGFDQ9GZP0 370 aaPredicted RBP17.06■□□□□ 0.32
PBX3-201ENST00000342287 CNNM2Q9H8M5 875 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 WDR33Q9C0J8 1336 aaKnown RBP17.06■□□□□ 0.32
PBX3-201ENST00000342287 PFKFB2O60825 505 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 CTDSPL2Q05D32 466 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 AKNAD1Q5T1N1 836 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 CRNKL1Q9BZJ0 848 aaKnown RBP17.06■□□□□ 0.32
PBX3-201ENST00000342287 EFCC1Q9HA90 598 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 AATFQ9NY61 560 aaKnown RBP eCLIP17.06■□□□□ 0.32
PBX3-201ENST00000342287 RSPH14Q9UHP6 348 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 LTBP1Q14766 1721 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 RIMBP2O15034 1052 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 EVCP57679 992 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 ANTXR2P58335 489 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 MFSD6Q6ZSS7 791 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 TBC1D22AQ8WUA7 517 aa17.06■□□□□ 0.32
PBX3-201ENST00000342287 COL11A2P13942 1736 aaPredicted RBP17.05■□□□□ 0.32
PBX3-201ENST00000342287 LDHCP07864 332 aa17.05■□□□□ 0.32
PBX3-201ENST00000342287 LRSAM1Q6UWE0 723 aa17.05■□□□□ 0.32
PBX3-201ENST00000342287 KRT23Q9C075 422 aa17.05■□□□□ 0.32
PBX3-201ENST00000342287 SYT1P21579 422 aa17.05■□□□□ 0.32
PBX3-201ENST00000342287 CHRNA5P30532 468 aa17.05■□□□□ 0.32
PBX3-201ENST00000342287 STAG1Q8WVM7 1258 aa17.05■□□□□ 0.32
PBX3-201ENST00000342287 RNF41Q9H4P4 317 aaPredicted RBP17.05■□□□□ 0.32
PBX3-201ENST00000342287 LMBRD1Q9NUN5 540 aa17.05■□□□□ 0.32
PBX3-201ENST00000342287 ANAPC4Q9UJX5 808 aa17.05■□□□□ 0.32
PBX3-201ENST00000342287 STX6O43752 255 aa17.04■□□□□ 0.32
PBX3-201ENST00000342287 PPARAQ07869 468 aa17.04■□□□□ 0.32
PBX3-201ENST00000342287 EYA3Q99504 573 aa17.04■□□□□ 0.32
PBX3-201ENST00000342287 FAM205AQ6ZU69 1335 aa17.04■□□□□ 0.32
PBX3-201ENST00000342287 B4E1Z4 1266 aa17.04■□□□□ 0.32
PBX3-201ENST00000342287 PRPF40AO75400 957 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms