RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 NAP1L2Q9ULW6 460 aaPredicted RBP12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 TACC3Q9Y6A5 838 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 SLC4A4Q9Y6R1 1079 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 SPATA31A6Q5VVP1 1343 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 IRS2Q9Y4H2 1338 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 GOLGA8AA7E2F4 631 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 KIF28PB7ZC32 967 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 KCNQ2O43526 872 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 PTPAQ15257 358 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 LUZP1Q86V48 1076 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 VPS37DQ86XT2 251 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 MAP3K14Q99558 947 aa12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 FTOQ9C0B1 505 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 NAT10Q9H0A0 1025 aaKnown RBP12.44□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CCDC69A6NI79 296 aa12.43□□□□□ -0.42
TRAF3IP2-201ENST00000340026 IFIT3O14879 490 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP2-201ENST00000340026 RANBP6O60518 1105 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP2-201ENST00000340026 PPARAQ07869 468 aa12.43□□□□□ -0.42
TRAF3IP2-201ENST00000340026 FOXP1Q9H334 677 aaPredicted RBP12.43□□□□□ -0.42
TRAF3IP2-201ENST00000340026 LRP2BPQ9P2M1 347 aa12.43□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CLIC4Q9Y696 253 aa12.43□□□□□ -0.42
TRAF3IP2-201ENST00000340026 TDO2P48775 406 aa12.43□□□□□ -0.42
TRAF3IP2-201ENST00000340026 DHX8Q14562 1220 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP2-201ENST00000340026 SEC23AQ15436 765 aa12.43□□□□□ -0.42
TRAF3IP2-201ENST00000340026 NBPF11Q86T75 865 aa12.43□□□□□ -0.42
TRAF3IP2-201ENST00000340026 FAM84BQ96KN1 310 aaPredicted RBP12.43□□□□□ -0.42
TRAF3IP2-201ENST00000340026 KIAA1468Q9P260 1216 aa12.43□□□□□ -0.42
TRAF3IP2-201ENST00000340026 MAGEB6P1A0A0J9YX57 407 aa12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 NEMFO60524 1076 aa12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 GUCY1B3Q02153 619 aa12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 SSRP1Q08945 709 aaKnown RBP12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 NOLC1Q14978 699 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 ESR2Q92731 530 aa12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 PRIMPOLQ96LW4 560 aa12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 DNAJC25Q9H1X3 360 aa12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 ERICH2A1L162 156 aa12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 MYO1BO43795 1136 aa12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 DEXIO95424 95 aa12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 TRIM29Q14134 588 aa12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 WTAPQ15007 396 aa12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 C15orf52Q6ZUT6 534 aaKnown RBP12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CEP57L1Q8IYX8 460 aa12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 RNF26Q9BY78 433 aaPredicted RBP12.42□□□□□ -0.42
TRAF3IP2-201ENST00000340026 ORC4O43929 436 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 MMP1P03956 469 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CYP7A1P22680 504 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 NDUFA8P51970 172 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 TUBE1Q9UJT0 475 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 MYH6P13533 1939 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CUTAO60888 179 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 RPS8P62241 208 aaKnown RBP12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CEBPZQ03701 1054 aaKnown RBP12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 SF3A1Q15459 793 aaKnown RBP12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 RTN1Q16799 776 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 SBK1Q52WX2 424 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 TBC1D9BQ66K14 1250 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 NFXL1Q6ZNB6 911 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 DHX40Q8IX18 779 aaKnown RBP12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 TRIM22Q8IYM9 498 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 NLRP3Q96P20 1036 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 KCNF1Q9H3M0 494 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 SENP2Q9HC62 589 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 KCND1Q9NSA2 647 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 TAF1P21675 1872 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 GOLGA6L19H0YKK7 550 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 SNAP23O00161 211 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CALM1P0DP23 149 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CALM2P0DP24 149 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CALM3P0DP25 149 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CTDSPL2Q05D32 466 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 RESP18Q5W5W9 173 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 C3orf67Q6ZVT6 689 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 MICU3Q86XE3 530 aa12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 CRACR2BQ8N4Y2 399 aaPredicted RBP12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 RBM28Q9NW13 759 aaKnown RBP12.41□□□□□ -0.42
TRAF3IP2-201ENST00000340026 TNRC6CQ9HCJ0 1690 aaKnown RBP12.4□□□□□ -0.42
TRAF3IP2-201ENST00000340026 PRKAB2O43741 272 aa12.4□□□□□ -0.42
TRAF3IP2-201ENST00000340026 GTF2F1P35269 517 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRAF3IP2-201ENST00000340026 FAM98CQ17RN3 349 aaKnown RBP12.4□□□□□ -0.42
TRAF3IP2-201ENST00000340026 RILPL1Q5EBL4 403 aa12.4□□□□□ -0.42
TRAF3IP2-201ENST00000340026 OTUD7BQ6GQQ9 843 aa12.4□□□□□ -0.42
TRAF3IP2-201ENST00000340026 TPTE2Q6XPS3 522 aa12.4□□□□□ -0.42
TRAF3IP2-201ENST00000340026 ADGRA1Q86SQ6 560 aa12.4□□□□□ -0.42
TRAF3IP2-201ENST00000340026 NOSTRINQ8IVI9 506 aa12.4□□□□□ -0.42
TRAF3IP2-201ENST00000340026 NSUN4Q96CB9 384 aaKnown RBP12.4□□□□□ -0.42
TRAF3IP2-201ENST00000340026 ATP8A2Q9NTI2 1148 aa12.4□□□□□ -0.42
TRAF3IP2-201ENST00000340026 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRAF3IP2-201ENST00000340026 ONECUT3O60422 494 aaPredicted RBP12.4□□□□□ -0.43
TRAF3IP2-201ENST00000340026 ZNF202O95125 648 aa12.4□□□□□ -0.43
TRAF3IP2-201ENST00000340026 POLR3DP05423 398 aaPredicted RBP12.4□□□□□ -0.43
TRAF3IP2-201ENST00000340026 C11orf57Q6ZUT1 292 aaPredicted RBP12.4□□□□□ -0.43
TRAF3IP2-201ENST00000340026 FANCBQ8NB91 859 aa12.4□□□□□ -0.43
TRAF3IP2-201ENST00000340026 SETDB2Q96T68 719 aa12.4□□□□□ -0.43
TRAF3IP2-201ENST00000340026 TTC12Q9H892 705 aaPredicted RBP12.4□□□□□ -0.43
TRAF3IP2-201ENST00000340026 IKBKBO14920 756 aa12.39□□□□□ -0.43
TRAF3IP2-201ENST00000340026 DDAH1O94760 285 aa12.39□□□□□ -0.43
TRAF3IP2-201ENST00000340026 TM4SF1P30408 202 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms