RNA–Protein interactions for RNA: ENST00000339697.4

SERINC1-201, Transcript of serine incorporator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERINC1, Length 3,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERINC1-201ENST00000339697 LY9Q9HBG7 655 aa11.9□□□□□ -0.5
SERINC1-201ENST00000339697 GNL3LQ9NVN8 582 aaKnown RBP11.9□□□□□ -0.5
SERINC1-201ENST00000339697 FAM205AQ6ZU69 1335 aa11.9□□□□□ -0.5
SERINC1-201ENST00000339697 ORC4O43929 436 aa11.9□□□□□ -0.5
SERINC1-201ENST00000339697 GORABQ5T7V8 394 aa11.9□□□□□ -0.5
SERINC1-201ENST00000339697 ZNF622Q969S3 477 aaKnown RBP eCLIP11.9□□□□□ -0.5
SERINC1-201ENST00000339697 GEMIN8Q9NWZ8 242 aaKnown RBP11.9□□□□□ -0.5
SERINC1-201ENST00000339697 TMEM63CQ9P1W3 806 aa11.9□□□□□ -0.5
SERINC1-201ENST00000339697 XDHP47989 1333 aa11.9□□□□□ -0.51
SERINC1-201ENST00000339697 PLIN4Q96Q06 1357 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 FAM237AA0A1B0GTK4 181 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 FAM177BA6PVY3 158 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 TULP1O00294 542 aaPredicted RBP11.89□□□□□ -0.51
SERINC1-201ENST00000339697 TTLL5Q6EMB2 1281 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 PDLIM2Q96JY6 352 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 MAP3K14Q99558 947 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 TSPYL1Q9H0U9 437 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 ADAMTSL1Q8N6G6 1762 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 ZNF213O14771 459 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 GADD45BO75293 160 aaPredicted RBP11.89□□□□□ -0.51
SERINC1-201ENST00000339697 SEC23AQ15436 765 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 LRSAM1Q6UWE0 723 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 ILDR1Q86SU0 546 aaPredicted RBP11.89□□□□□ -0.51
SERINC1-201ENST00000339697 USP48Q86UV5 1035 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
SERINC1-201ENST00000339697 FAM177A1Q8N128 213 aaPredicted RBP11.89□□□□□ -0.51
SERINC1-201ENST00000339697 NKX2-3Q8TAU0 364 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 FAM217BQ9NTX9 383 aaPredicted RBP11.89□□□□□ -0.51
SERINC1-201ENST00000339697 SUGT1Q9Y2Z0 365 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 NEDD4P46934 1319 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 GTF2F1P35269 517 aaKnown RBP eCLIP11.89□□□□□ -0.51
SERINC1-201ENST00000339697 GABPB1Q06547 395 aaPredicted RBP11.89□□□□□ -0.51
SERINC1-201ENST00000339697 FLAD1Q8NFF5 587 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 KRT23Q9C075 422 aa11.89□□□□□ -0.51
SERINC1-201ENST00000339697 ANGEL1Q9UNK9 670 aaKnown RBP11.89□□□□□ -0.51
SERINC1-201ENST00000339697 BBOX1O75936 387 aa11.88□□□□□ -0.51
SERINC1-201ENST00000339697 CAPN2P17655 700 aa11.88□□□□□ -0.51
SERINC1-201ENST00000339697 U2AF2P26368 475 aaKnown RBP eCLIP11.88□□□□□ -0.513e-17■■■■□ 24
SERINC1-201ENST00000339697 FKBP1AP62942 108 aaKnown RBP11.88□□□□□ -0.51
SERINC1-201ENST00000339697 CYB5R4Q7L1T6 521 aa11.88□□□□□ -0.51
SERINC1-201ENST00000339697 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.88□□□□□ -0.51
SERINC1-201ENST00000339697 LRRC2Q9BYS8 371 aa11.88□□□□□ -0.51
SERINC1-201ENST00000339697 GAKO14976 1311 aa11.88□□□□□ -0.51
SERINC1-201ENST00000339697 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.88□□□□□ -0.51
SERINC1-201ENST00000339697 KCNQ4P56696 695 aa11.88□□□□□ -0.51
SERINC1-201ENST00000339697 DDR1Q08345 913 aa11.88□□□□□ -0.51
SERINC1-201ENST00000339697 STK3Q13188 491 aa11.88□□□□□ -0.51
SERINC1-201ENST00000339697 AKNAD1Q5T1N1 836 aa11.88□□□□□ -0.51
SERINC1-201ENST00000339697 CDC37L1Q7L3B6 337 aa11.88□□□□□ -0.51
SERINC1-201ENST00000339697 CCDC39Q9UFE4 941 aa11.88□□□□□ -0.51
SERINC1-201ENST00000339697 CNPY2Q9Y2B0 182 aa11.88□□□□□ -0.51
SERINC1-201ENST00000339697 SNAP23O00161 211 aa11.87□□□□□ -0.51
SERINC1-201ENST00000339697 LCORLQ8N3X6 602 aa11.87□□□□□ -0.51
SERINC1-201ENST00000339697 MAGEB6Q8N7X4 407 aa11.87□□□□□ -0.51
SERINC1-201ENST00000339697 HELBQ8NG08 1087 aaPredicted RBP11.87□□□□□ -0.51
SERINC1-201ENST00000339697 BRF1Q92994 677 aa11.87□□□□□ -0.51
SERINC1-201ENST00000339697 SCAND2PQ9GZW5 306 aaPredicted RBP11.87□□□□□ -0.51
SERINC1-201ENST00000339697 RCOR1Q9UKL0 485 aa11.87□□□□□ -0.51
SERINC1-201ENST00000339697 PRC1O43663 620 aa11.87□□□□□ -0.51
SERINC1-201ENST00000339697 CAVIN4Q5BKX8 364 aa11.87□□□□□ -0.51
SERINC1-201ENST00000339697 NBPF11Q86T75 865 aa11.87□□□□□ -0.51
SERINC1-201ENST00000339697 TCP11L1Q9NUJ3 509 aa11.87□□□□□ -0.51
SERINC1-201ENST00000339697 TULP2O00295 520 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 RFC4P35249 363 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 KIAA2012Q0VF49 1180 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 ELOA2Q8IYF1 753 aaPredicted RBP11.86□□□□□ -0.51
SERINC1-201ENST00000339697 ATP8A2Q9NTI2 1148 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 SLX4Q8IY92 1834 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 DHX16O60231 1041 aaKnown RBP11.86□□□□□ -0.51
SERINC1-201ENST00000339697 FER1L6Q2WGJ9 1857 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 FEZ1Q99689 392 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.86□□□□□ -0.51
SERINC1-201ENST00000339697 MBD4O95243 580 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 ATP2B4P23634 1241 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 MEX3CQ5U5Q3 659 aaKnown RBP11.86□□□□□ -0.51
SERINC1-201ENST00000339697 LARP1BQ659C4 914 aaKnown RBP11.86□□□□□ -0.51
SERINC1-201ENST00000339697 SMIM5Q71RC9 77 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 SP8Q8IXZ3 490 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 TMTC2Q8N394 836 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 MRIQ9BWK5 157 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 CALCOCO1Q9P1Z2 691 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 EP400Q96L91 3159 aa11.86□□□□□ -0.51
SERINC1-201ENST00000339697 SCN9AQ15858 1988 aa11.85□□□□□ -0.51
SERINC1-201ENST00000339697 PTPDC1A2A3K4 754 aa11.85□□□□□ -0.51
SERINC1-201ENST00000339697 TXNRD1Q16881 649 aa11.85□□□□□ -0.51
SERINC1-201ENST00000339697 APOA5Q6Q788 366 aa11.85□□□□□ -0.51
SERINC1-201ENST00000339697 CNBD1Q8NA66 436 aa11.85□□□□□ -0.51
SERINC1-201ENST00000339697 AIDAQ96BJ3 306 aa11.85□□□□□ -0.51
SERINC1-201ENST00000339697 RTFDC1Q9BY42 306 aaPredicted RBP11.85□□□□□ -0.51
SERINC1-201ENST00000339697 RNF41Q9H4P4 317 aaPredicted RBP11.85□□□□□ -0.51
SERINC1-201ENST00000339697 HIBADHP31937 336 aaKnown RBP11.85□□□□□ -0.51
SERINC1-201ENST00000339697 APOBRQ0VD83 1088 aa11.85□□□□□ -0.51
SERINC1-201ENST00000339697 FUT2Q10981 343 aa11.85□□□□□ -0.51
SERINC1-201ENST00000339697 WASHC4Q2M389 1173 aa11.85□□□□□ -0.51
SERINC1-201ENST00000339697 JAK2O60674 1132 aa11.84□□□□□ -0.51
SERINC1-201ENST00000339697 CCDC183Q5T5S1 534 aa11.84□□□□□ -0.51
SERINC1-201ENST00000339697 SPTY2D1Q68D10 685 aaPredicted RBP11.84□□□□□ -0.51
SERINC1-201ENST00000339697 WDR66Q8TBY9 1149 aa11.84□□□□□ -0.51
SERINC1-201ENST00000339697 RBM17Q96I25 401 aaKnown RBP11.84□□□□□ -0.51
SERINC1-201ENST00000339697 POLR3EQ9NVU0 708 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms