RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 SUPT20HQ8NEM7 779 aa12.34□□□□□ -0.43
AP1S3-201ENST00000334271 NACAP1Q9BZK3 213 aa12.34□□□□□ -0.43
AP1S3-201ENST00000334271 COA1Q9GZY4 146 aa12.34□□□□□ -0.43
AP1S3-201ENST00000334271 ZNF532Q9HCE3 1301 aa12.34□□□□□ -0.43
AP1S3-201ENST00000334271 TIAM2Q8IVF5 1701 aa12.33□□□□□ -0.44
AP1S3-201ENST00000334271 CACNA1SQ13698 1873 aa12.33□□□□□ -0.44
AP1S3-201ENST00000334271 GPAA1O43292 621 aa12.33□□□□□ -0.44
AP1S3-201ENST00000334271 LDHCP07864 332 aa12.33□□□□□ -0.44
AP1S3-201ENST00000334271 AIDAQ96BJ3 306 aa12.33□□□□□ -0.44
AP1S3-201ENST00000334271 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
AP1S3-201ENST00000334271 FAM205AQ6ZU69 1335 aa12.33□□□□□ -0.44
AP1S3-201ENST00000334271 BDNFP23560 247 aa12.33□□□□□ -0.44
AP1S3-201ENST00000334271 GYG1P46976 350 aa12.33□□□□□ -0.44
AP1S3-201ENST00000334271 RBM46Q8TBY0 533 aaKnown RBP12.33□□□□□ -0.44
AP1S3-201ENST00000334271 STRBPQ96SI9 672 aaKnown RBP12.33□□□□□ -0.44
AP1S3-201ENST00000334271 RTFDC1Q9BY42 306 aaPredicted RBP12.33□□□□□ -0.44
AP1S3-201ENST00000334271 M0R2C6 588 aa12.32□□□□□ -0.44
AP1S3-201ENST00000334271 HSP90AA1P07900 732 aaKnown RBP12.32□□□□□ -0.44
AP1S3-201ENST00000334271 TCF3P15923 654 aa12.32□□□□□ -0.44
AP1S3-201ENST00000334271 RPS6KB1P23443 525 aa12.32□□□□□ -0.44
AP1S3-201ENST00000334271 NUCB2P80303 420 aa12.32□□□□□ -0.44
AP1S3-201ENST00000334271 GPSM2P81274 684 aa12.32□□□□□ -0.44
AP1S3-201ENST00000334271 SOGA3Q5TF21 947 aa12.32□□□□□ -0.44
AP1S3-201ENST00000334271 RASEFQ8IZ41 740 aa12.32□□□□□ -0.44
AP1S3-201ENST00000334271 TBC1D16Q8TBP0 767 aa12.32□□□□□ -0.44
AP1S3-201ENST00000334271 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
AP1S3-201ENST00000334271 UBXN4Q92575 508 aa12.32□□□□□ -0.44
AP1S3-201ENST00000334271 JAKMIP1Q96N16 626 aaKnown RBP12.32□□□□□ -0.44
AP1S3-201ENST00000334271 NEK1Q96PY6 1258 aa12.32□□□□□ -0.44
AP1S3-201ENST00000334271 PDRG1Q9NUG6 133 aa12.32□□□□□ -0.44
AP1S3-201ENST00000334271 MYO5AQ9Y4I1 1855 aaKnown RBP12.32□□□□□ -0.44
AP1S3-201ENST00000334271 CASTP20810 708 aaKnown RBP12.31□□□□□ -0.44
AP1S3-201ENST00000334271 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.31□□□□□ -0.44
AP1S3-201ENST00000334271 NDUFB9Q9Y6M9 179 aa12.31□□□□□ -0.44
AP1S3-201ENST00000334271 COL1A1P02452 1464 aaPredicted RBP12.31□□□□□ -0.44
AP1S3-201ENST00000334271 FRAT2O75474 233 aaPredicted RBP12.31□□□□□ -0.44
AP1S3-201ENST00000334271 UFL1O94874 794 aa12.31□□□□□ -0.44
AP1S3-201ENST00000334271 C2CD5Q86YS7 1000 aa12.31□□□□□ -0.44
AP1S3-201ENST00000334271 MAGEB6Q8N7X4 407 aa12.31□□□□□ -0.44
AP1S3-201ENST00000334271 FAM163AQ96GL9 167 aaPredicted RBP12.31□□□□□ -0.44
AP1S3-201ENST00000334271 AGXT2Q9BYV1 514 aa12.31□□□□□ -0.44
AP1S3-201ENST00000334271 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
AP1S3-201ENST00000334271 CNNM2Q9H8M5 875 aa12.31□□□□□ -0.44
AP1S3-201ENST00000334271 STK10O94804 968 aaKnown RBP12.3□□□□□ -0.44
AP1S3-201ENST00000334271 CYP21A2P08686 494 aa12.3□□□□□ -0.44
AP1S3-201ENST00000334271 MAP2K1Q02750 393 aaPredicted RBP12.3□□□□□ -0.44
AP1S3-201ENST00000334271 NAA16Q6N069 864 aaPredicted RBP12.3□□□□□ -0.44
AP1S3-201ENST00000334271 PI16Q6UXB8 463 aa12.3□□□□□ -0.44
AP1S3-201ENST00000334271 DHX32Q7L7V1 743 aaKnown RBP12.3□□□□□ -0.44
AP1S3-201ENST00000334271 TMX3Q96JJ7 454 aa12.3□□□□□ -0.44
AP1S3-201ENST00000334271 SEC62Q99442 399 aaKnown RBP12.3□□□□□ -0.44
AP1S3-201ENST00000334271 MRIQ9BWK5 157 aa12.3□□□□□ -0.44
AP1S3-201ENST00000334271 NSFL1CQ9UNZ2 370 aaKnown RBP12.3□□□□□ -0.44
AP1S3-201ENST00000334271 ZNF213O14771 459 aa12.3□□□□□ -0.44
AP1S3-201ENST00000334271 PLCG2P16885 1265 aa12.3□□□□□ -0.44
AP1S3-201ENST00000334271 TGFB2P61812 414 aa12.3□□□□□ -0.44
AP1S3-201ENST00000334271 RNF41Q9H4P4 317 aaPredicted RBP12.3□□□□□ -0.44
AP1S3-201ENST00000334271 CD209Q9NNX6 404 aa12.3□□□□□ -0.44
AP1S3-201ENST00000334271 GABBR1Q9UBS5 961 aa12.3□□□□□ -0.44
AP1S3-201ENST00000334271 ANAPC4Q9UJX5 808 aa12.3□□□□□ -0.44
AP1S3-201ENST00000334271 WWC3Q9ULE0 1092 aa12.3□□□□□ -0.44
AP1S3-201ENST00000334271 MAGEB6P1A0A0J9YX57 407 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 FGAP02671 866 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 PPP4CP60510 307 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 PUS10Q3MIT2 529 aaKnown RBP12.29□□□□□ -0.44
AP1S3-201ENST00000334271 CLEC17AQ6ZS10 378 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 SND1Q7KZF4 910 aaKnown RBP eCLIP12.29□□□□□ -0.44
AP1S3-201ENST00000334271 NSUN4Q96CB9 384 aaKnown RBP12.29□□□□□ -0.44
AP1S3-201ENST00000334271 ATP8A2Q9NTI2 1148 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 RAI14Q9P0K7 980 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.29□□□□□ -0.44
AP1S3-201ENST00000334271 COMMD10Q9Y6G5 202 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 EP400Q96L91 3159 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 CYP7A1P22680 504 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 SSR1P43307 286 aaKnown RBP12.29□□□□□ -0.44
AP1S3-201ENST00000334271 GYS2P54840 703 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 EVCP57679 992 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 DPP8Q6V1X1 898 aaPredicted RBP12.29□□□□□ -0.44
AP1S3-201ENST00000334271 PODNQ7Z5L7 613 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 CCDC24Q8N4L8 307 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 NCOA7Q8NI08 942 aa12.29□□□□□ -0.44
AP1S3-201ENST00000334271 ZC3H12CQ9C0D7 883 aaKnown RBP12.29□□□□□ -0.44
AP1S3-201ENST00000334271 CD2BP2O95400 341 aaKnown RBP12.28□□□□□ -0.44
AP1S3-201ENST00000334271 BAG3O95817 575 aa12.28□□□□□ -0.44
AP1S3-201ENST00000334271 LDHBP07195 334 aaKnown RBP12.28□□□□□ -0.44
AP1S3-201ENST00000334271 EXOSC10Q01780 885 aaKnown RBP12.28□□□□□ -0.44
AP1S3-201ENST00000334271 TRDNQ13061 729 aa12.28□□□□□ -0.44
AP1S3-201ENST00000334271 CCDC129Q6ZRS4 1044 aa12.28□□□□□ -0.44
AP1S3-201ENST00000334271 RTKN2Q8IZC4 609 aa12.28□□□□□ -0.44
AP1S3-201ENST00000334271 KRT23Q9C075 422 aa12.28□□□□□ -0.44
AP1S3-201ENST00000334271 MTFR1LQ9H019 292 aa12.28□□□□□ -0.44
AP1S3-201ENST00000334271 SNAP23O00161 211 aa12.27□□□□□ -0.44
AP1S3-201ENST00000334271 AK2P54819 239 aa12.27□□□□□ -0.44
AP1S3-201ENST00000334271 CHD4Q14839 1912 aa12.27□□□□□ -0.44
AP1S3-201ENST00000334271 AMOTL1Q8IY63 956 aa12.27□□□□□ -0.44
AP1S3-201ENST00000334271 NOL10Q9BSC4 688 aaKnown RBP12.27□□□□□ -0.44
AP1S3-201ENST00000334271 CRNKL1Q9BZJ0 848 aaKnown RBP12.27□□□□□ -0.44
AP1S3-201ENST00000334271 SNED1Q8TER0 1413 aa12.27□□□□□ -0.45
AP1S3-201ENST00000334271 E7EWF7 191 aa12.27□□□□□ -0.45
AP1S3-201ENST00000334271 FOXP2O15409 715 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms