RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 CYP2D7A0A087X1C5 515 aa14.34□□□□□ -0.11
TRIM49B-201ENST00000332682 USP17L12C9JPN9 530 aa14.34□□□□□ -0.11
TRIM49B-201ENST00000332682 USP17L21D6R901 530 aa14.34□□□□□ -0.11
TRIM49B-201ENST00000332682 RPS12P25398 132 aaKnown RBP14.34□□□□□ -0.11
TRIM49B-201ENST00000332682 RBM5P52756 815 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRIM49B-201ENST00000332682 CTDSPL2Q05D32 466 aa14.34□□□□□ -0.11
TRIM49B-201ENST00000332682 SBK1Q52WX2 424 aa14.34□□□□□ -0.11
TRIM49B-201ENST00000332682 MAPKAPK5Q8IW41 473 aa14.34□□□□□ -0.11
TRIM49B-201ENST00000332682 OGFOD1Q8N543 542 aa14.34□□□□□ -0.11
TRIM49B-201ENST00000332682 USP40Q9NVE5 1235 aa14.34□□□□□ -0.11
TRIM49B-201ENST00000332682 MCM9Q9NXL9 1143 aa14.34□□□□□ -0.11
TRIM49B-201ENST00000332682 HDAC9Q9UKV0 1011 aa14.34□□□□□ -0.11
TRIM49B-201ENST00000332682 SMIM22K7EJ46 135 aa14.33□□□□□ -0.12
TRIM49B-201ENST00000332682 RPS6KB1P23443 525 aa14.33□□□□□ -0.12
TRIM49B-201ENST00000332682 BECN1Q14457 450 aa14.33□□□□□ -0.12
TRIM49B-201ENST00000332682 HSCBQ8IWL3 235 aa14.33□□□□□ -0.12
TRIM49B-201ENST00000332682 STAG1Q8WVM7 1258 aa14.33□□□□□ -0.12
TRIM49B-201ENST00000332682 TACC3Q9Y6A5 838 aa14.33□□□□□ -0.12
TRIM49B-201ENST00000332682 NEDD4P46934 1319 aa14.33□□□□□ -0.12
TRIM49B-201ENST00000332682 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 MINDY4BA8MYZ0 360 aa14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 HMGB1P09429 215 aaKnown RBP14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 CYP2D6P10635 497 aa14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 EVX2Q03828 476 aa14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 GPR162Q16538 588 aa14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 AKNAD1Q5T1N1 836 aa14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 PRMT6Q96LA8 375 aaPredicted RBP14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 TCEANC2Q96MN5 208 aa14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 DDX4Q9NQI0 724 aaKnown RBP14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 PDRG1Q9NUG6 133 aa14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 RNF181Q9P0P0 153 aa14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 ROBO3Q96MS0 1386 aa14.32□□□□□ -0.12
TRIM49B-201ENST00000332682 SHTN1A0MZ66 631 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 GMPSP49915 693 aaPredicted RBP14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 ZNF280AP59817 542 aaPredicted RBP14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 NFIAQ12857 509 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 C12orf60Q5U649 245 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 DHX32Q7L7V1 743 aaKnown RBP14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 MB21D2Q8IYB1 491 aaPredicted RBP14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 MTMR14Q8NCE2 650 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 NCOA7Q8NI08 942 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 DPF2Q92785 391 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 GJA3Q9Y6H8 435 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 K7ELQ4 463 aaPredicted RBP14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 SLC4A3P48751 1232 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 MMP14P50281 582 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 CACNB3P54284 484 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 AK2P54819 239 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 EXOSC10Q01780 885 aaKnown RBP14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 PICALMQ13492 652 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 DLGAP5Q15398 846 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 C9orf131Q5VYM1 1079 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 MFSD6Q6ZSS7 791 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 RALYLQ86SE5 291 aaKnown RBP14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 GPC2Q8N158 579 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 NKX2-3Q8TAU0 364 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 ZBED3Q96IU2 234 aaPredicted RBP14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 IDI2Q9BXS1 227 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 RNF41Q9H4P4 317 aaPredicted RBP14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 TDRD3Q9H7E2 651 aaKnown RBP14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 INCENPQ9NQS7 918 aa14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 SAP30BPQ9UHR5 308 aaKnown RBP14.31□□□□□ -0.12
TRIM49B-201ENST00000332682 NPM3O75607 178 aaKnown RBP14.3□□□□□ -0.12
TRIM49B-201ENST00000332682 FGRP09769 529 aa14.3□□□□□ -0.12
TRIM49B-201ENST00000332682 MCM2P49736 904 aa14.3□□□□□ -0.12
TRIM49B-201ENST00000332682 TRDNQ13061 729 aa14.3□□□□□ -0.12
TRIM49B-201ENST00000332682 SLC4A8Q2Y0W8 1093 aa14.3□□□□□ -0.12
TRIM49B-201ENST00000332682 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
TRIM49B-201ENST00000332682 OSBPL5Q9H0X9 879 aaPredicted RBP14.3□□□□□ -0.12
TRIM49B-201ENST00000332682 ALDH8A1Q9H2A2 487 aaPredicted RBP14.3□□□□□ -0.12
TRIM49B-201ENST00000332682 CNNM2Q9H8M5 875 aa14.3□□□□□ -0.12
TRIM49B-201ENST00000332682 MYOZ2Q9NPC6 264 aa14.3□□□□□ -0.12
TRIM49B-201ENST00000332682 B4E1Z4 1266 aa14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 GRIN3BO60391 1043 aa14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 POLR3DP05423 398 aaPredicted RBP14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 PCP11498 1178 aaKnown RBP14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 PLCD1P51178 756 aa14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 ANTXR2P58335 489 aa14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 TOB2Q14106 344 aaPredicted RBP14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 AMOTL1Q8IY63 956 aa14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 STK11IPQ8N1F8 1099 aa14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 KRT23Q9C075 422 aa14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 FAM198AQ9UFP1 575 aa14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 WDR19Q8NEZ3 1342 aa14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 SIPA1L1O43166 1804 aa14.29□□□□□ -0.12
TRIM49B-201ENST00000332682 WNT10BO00744 389 aa14.28□□□□□ -0.12
TRIM49B-201ENST00000332682 EGFRP00533 1210 aa14.28□□□□□ -0.12
TRIM49B-201ENST00000332682 SLC3A2P08195 630 aaKnown RBP14.28□□□□□ -0.12
TRIM49B-201ENST00000332682 MCM5P33992 734 aa14.28□□□□□ -0.12
TRIM49B-201ENST00000332682 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
TRIM49B-201ENST00000332682 NOL8Q76FK4 1167 aaKnown RBP14.28□□□□□ -0.12
TRIM49B-201ENST00000332682 CHST3Q7LGC8 479 aa14.28□□□□□ -0.12
TRIM49B-201ENST00000332682 LRRC2Q9BYS8 371 aa14.28□□□□□ -0.12
TRIM49B-201ENST00000332682 CNOT7Q9UIV1 285 aaKnown RBP14.28□□□□□ -0.12
TRIM49B-201ENST00000332682 COL2A1P02458 1487 aaPredicted RBP14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 CLRN2A0PK11 232 aa14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 PRC1O43663 620 aa14.27□□□□□ -0.12
TRIM49B-201ENST00000332682 ORC4O43929 436 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms