RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 JAKMIP1Q96N16 626 aaKnown RBP32.57■■■□□ 2.8
CTDNEP1-201ENST00000318988 GPRC5DQ9NZD1 345 aa32.57■■■□□ 2.8
CTDNEP1-201ENST00000318988 SHTN1A0MZ66 631 aa32.56■■■□□ 2.8
CTDNEP1-201ENST00000318988 WDHD1O75717 1129 aaPredicted RBP32.56■■■□□ 2.8
CTDNEP1-201ENST00000318988 PPARAQ07869 468 aa32.56■■■□□ 2.8
CTDNEP1-201ENST00000318988 SBK1Q52WX2 424 aa32.56■■■□□ 2.8
CTDNEP1-201ENST00000318988 MKRN1Q9UHC7 482 aaKnown RBP32.56■■■□□ 2.8
CTDNEP1-201ENST00000318988 SLC3A2P08195 630 aaKnown RBP32.56■■■□□ 2.8
CTDNEP1-201ENST00000318988 SAP30BPQ9UHR5 308 aaKnown RBP32.56■■■□□ 2.8
CTDNEP1-201ENST00000318988 IDI2Q9BXS1 227 aa32.55■■■□□ 2.8
CTDNEP1-201ENST00000318988 E7EWF7 191 aa32.54■■■□□ 2.8
CTDNEP1-201ENST00000318988 TRDNQ13061 729 aa32.54■■■□□ 2.8
CTDNEP1-201ENST00000318988 TM6SF1Q9BZW5 370 aa32.54■■■□□ 2.8
CTDNEP1-201ENST00000318988 ZNF70Q9UC06 446 aaPredicted RBP32.54■■■□□ 2.8
CTDNEP1-201ENST00000318988 TAF6LQ9Y6J9 622 aa32.54■■■□□ 2.8
CTDNEP1-201ENST00000318988 WNT10BO00744 389 aa32.53■■■□□ 2.8
CTDNEP1-201ENST00000318988 CASTP20810 708 aaKnown RBP32.53■■■□□ 2.8
CTDNEP1-201ENST00000318988 CACNB3P54284 484 aa32.53■■■□□ 2.8
CTDNEP1-201ENST00000318988 KIF4BQ2VIQ3 1234 aa32.53■■■□□ 2.8
CTDNEP1-201ENST00000318988 ADCK5Q3MIX3 580 aa32.53■■■□□ 2.8
CTDNEP1-201ENST00000318988 TBC1D10BQ4KMP7 808 aaPredicted RBP32.53■■■□□ 2.8
CTDNEP1-201ENST00000318988 SAMD7Q7Z3H4 446 aa32.53■■■□□ 2.8
CTDNEP1-201ENST00000318988 NEK1Q96PY6 1258 aa32.53■■■□□ 2.8
CTDNEP1-201ENST00000318988 RNF41Q9H4P4 317 aaPredicted RBP32.53■■■□□ 2.8
CTDNEP1-201ENST00000318988 ANAPC4Q9UJX5 808 aa32.53■■■□□ 2.8
CTDNEP1-201ENST00000318988 CLRN2A0PK11 232 aa32.52■■■□□ 2.8
CTDNEP1-201ENST00000318988 CTDSPL2Q05D32 466 aa32.52■■■□□ 2.8
CTDNEP1-201ENST00000318988 SPDYE2Q495Y8 402 aa32.52■■■□□ 2.8
CTDNEP1-201ENST00000318988 ZBED3Q96IU2 234 aaPredicted RBP32.52■■■□□ 2.8
CTDNEP1-201ENST00000318988 DDX4Q9NQI0 724 aaKnown RBP32.52■■■□□ 2.8
CTDNEP1-201ENST00000318988 CYP2D7A0A087X1C5 515 aa32.51■■■□□ 2.8
CTDNEP1-201ENST00000318988 NPM3O75607 178 aaKnown RBP32.51■■■□□ 2.8
CTDNEP1-201ENST00000318988 HMGB1P09429 215 aaKnown RBP32.51■■■□□ 2.8
CTDNEP1-201ENST00000318988 NFIAQ12857 509 aa32.51■■■□□ 2.8
CTDNEP1-201ENST00000318988 MFSD6Q6ZSS7 791 aa32.51■■■□□ 2.8
CTDNEP1-201ENST00000318988 RALYLQ86SE5 291 aaKnown RBP32.51■■■□□ 2.8
CTDNEP1-201ENST00000318988 OSBPL5Q9H0X9 879 aaPredicted RBP32.51■■■□□ 2.8
CTDNEP1-201ENST00000318988 VEZTQ9HBM0 779 aa32.51■■■□□ 2.8
CTDNEP1-201ENST00000318988 CYP46A1Q9Y6A2 500 aa32.51■■■□□ 2.8
CTDNEP1-201ENST00000318988 SLC4A8Q2Y0W8 1093 aa32.51■■■□□ 2.79
CTDNEP1-201ENST00000318988 NBPF9Q3BBW0 867 aa32.51■■■□□ 2.79
CTDNEP1-201ENST00000318988 AKNAD1Q5T1N1 836 aa32.51■■■□□ 2.79
CTDNEP1-201ENST00000318988 C12orf60Q5U649 245 aa32.51■■■□□ 2.79
CTDNEP1-201ENST00000318988 BLOC1S2Q6QNY1 142 aa32.51■■■□□ 2.79
CTDNEP1-201ENST00000318988 TTC6Q86TZ1 520 aa32.51■■■□□ 2.79
CTDNEP1-201ENST00000318988 TBC1D10CQ8IV04 446 aa32.51■■■□□ 2.79
CTDNEP1-201ENST00000318988 IL27Q8NEV9 243 aa32.51■■■□□ 2.79
CTDNEP1-201ENST00000318988 NEK4P51957 841 aa32.5■■■□□ 2.79
CTDNEP1-201ENST00000318988 TCP10Q12799 353 aa32.5■■■□□ 2.79
CTDNEP1-201ENST00000318988 NCOA7Q8NI08 942 aa32.5■■■□□ 2.79
CTDNEP1-201ENST00000318988 UPF3BQ9BZI7 483 aaKnown RBP32.5■■■□□ 2.79
CTDNEP1-201ENST00000318988 UTRNP46939 3433 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 NAV1Q8NEY1 1877 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 GLTPD2A6NH11 291 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 ST18O60284 1047 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 ENTPD3O75355 529 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 CYP2D6P10635 497 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 EPS15P42566 896 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 STOX1Q6ZVD7 989 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 STK11IPQ8N1F8 1099 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 STAG1Q8WVM7 1258 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 NBPF3Q9H094 633 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 CNNM2Q9H8M5 875 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 ZSWIM6Q9HCJ5 1215 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 TOMM22Q9NS69 142 aa32.49■■■□□ 2.79
CTDNEP1-201ENST00000318988 TCP10L2B9ZVM9 353 aa32.48■■■□□ 2.79
CTDNEP1-201ENST00000318988 HLA-DOAP06340 250 aa32.48■■■□□ 2.79
CTDNEP1-201ENST00000318988 PCP11498 1178 aaKnown RBP32.48■■■□□ 2.79
CTDNEP1-201ENST00000318988 FKBP1CQ5VVH2 108 aa32.48■■■□□ 2.79
CTDNEP1-201ENST00000318988 ZSCAN29Q8IWY8 852 aaPredicted RBP32.48■■■□□ 2.79
CTDNEP1-201ENST00000318988 FAM198AQ9UFP1 575 aa32.48■■■□□ 2.79
CTDNEP1-201ENST00000318988 BAZ2AQ9UIF9 1905 aaKnown RBP32.48■■■□□ 2.79
CTDNEP1-201ENST00000318988 PDE4BQ07343 736 aa32.47■■■□□ 2.79
CTDNEP1-201ENST00000318988 RUFY3Q7L099 469 aa32.47■■■□□ 2.79
CTDNEP1-201ENST00000318988 KRT23Q9C075 422 aa32.47■■■□□ 2.79
CTDNEP1-201ENST00000318988 DHX36Q9H2U1 1008 aaKnown RBP32.47■■■□□ 2.79
CTDNEP1-201ENST00000318988 EGFRP00533 1210 aa32.46■■■□□ 2.79
CTDNEP1-201ENST00000318988 ADARB2Q9NS39 739 aaKnown RBP32.46■■■□□ 2.79
CTDNEP1-201ENST00000318988 LAMA4Q16363 1823 aa32.46■■■□□ 2.79
CTDNEP1-201ENST00000318988 ECM29Q5VYK3 1845 aa32.46■■■□□ 2.79
CTDNEP1-201ENST00000318988 CDK5RAP2Q96SN8 1893 aa32.46■■■□□ 2.79
CTDNEP1-201ENST00000318988 TNNI2P48788 182 aa32.46■■■□□ 2.79
CTDNEP1-201ENST00000318988 L3MBTL3Q96JM7 780 aaPredicted RBP32.46■■■□□ 2.79
CTDNEP1-201ENST00000318988 ZNF287Q9HBT7 754 aa32.46■■■□□ 2.79
CTDNEP1-201ENST00000318988 TNFAIP1Q13829 316 aa32.45■■■□□ 2.78
CTDNEP1-201ENST00000318988 RRP12Q5JTH9 1297 aaKnown RBP32.45■■■□□ 2.78
CTDNEP1-201ENST00000318988 FOCADQ5VW36 1801 aa32.44■■■□□ 2.78
CTDNEP1-201ENST00000318988 RPS6KB1P23443 525 aa32.44■■■□□ 2.78
CTDNEP1-201ENST00000318988 PLCD1P51178 756 aa32.44■■■□□ 2.78
CTDNEP1-201ENST00000318988 PDRG1Q9NUG6 133 aa32.44■■■□□ 2.78
CTDNEP1-201ENST00000318988 HACL1Q9UJ83 578 aa32.44■■■□□ 2.78
CTDNEP1-201ENST00000318988 DHX32Q7L7V1 743 aaKnown RBP32.43■■■□□ 2.78
CTDNEP1-201ENST00000318988 TRPM4Q8TD43 1214 aa32.43■■■□□ 2.78
CTDNEP1-201ENST00000318988 CPA1P15085 419 aa32.42■■■□□ 2.78
CTDNEP1-201ENST00000318988 FAM83AQ86UY5 434 aa32.42■■■□□ 2.78
CTDNEP1-201ENST00000318988 ZFPM1Q8IX07 1006 aa32.42■■■□□ 2.78
CTDNEP1-201ENST00000318988 FAM151AQ8WW52 585 aa32.42■■■□□ 2.78
CTDNEP1-201ENST00000318988 MKNK2Q9HBH9 465 aa32.42■■■□□ 2.78
CTDNEP1-201ENST00000318988 NEDD4P46934 1319 aa32.42■■■□□ 2.78
CTDNEP1-201ENST00000318988 B4E1Z4 1266 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms