RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SPTY2D1Q68D10 685 aaPredicted RBP21.44■■□□□ 1.02
CCDC43-201ENST00000315286 GIMAP6Q6P9H5 292 aa21.44■■□□□ 1.02
CCDC43-201ENST00000315286 CTR9Q6PD62 1173 aa21.44■■□□□ 1.02
CCDC43-201ENST00000315286 WDR66Q8TBY9 1149 aa21.44■■□□□ 1.02
CCDC43-201ENST00000315286 MYH2Q9UKX2 1941 aa21.44■■□□□ 1.02
CCDC43-201ENST00000315286 BBOX1O75936 387 aa21.44■■□□□ 1.02
CCDC43-201ENST00000315286 WTAPQ15007 396 aa21.44■■□□□ 1.02
CCDC43-201ENST00000315286 NTRK3Q16288 839 aa21.44■■□□□ 1.02
CCDC43-201ENST00000315286 ZNF804AQ7Z570 1209 aa21.44■■□□□ 1.02
CCDC43-201ENST00000315286 DZIP1Q86YF9 867 aaKnown RBP21.44■■□□□ 1.02
CCDC43-201ENST00000315286 FTOQ9C0B1 505 aaKnown RBP eCLIP21.44■■□□□ 1.02
CCDC43-201ENST00000315286 MAST2Q6P0Q8 1798 aa21.44■■□□□ 1.02
CCDC43-201ENST00000315286 KLRG2A4D1S0 409 aaPredicted RBP21.43■■□□□ 1.02
CCDC43-201ENST00000315286 USP17L12C9JPN9 530 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 USP17L21D6R901 530 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 CDKL5O76039 1030 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 UFL1O94874 794 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 CPLX2Q6PUV4 134 aaKnown RBP21.43■■□□□ 1.02
CCDC43-201ENST00000315286 COL23A1Q86Y22 540 aaPredicted RBP21.43■■□□□ 1.02
CCDC43-201ENST00000315286 PHKBQ93100 1093 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 AKT1S1Q96B36 256 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 USP28Q96RU2 1077 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 MTA3Q9BTC8 594 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 CRNKL1Q9BZJ0 848 aaKnown RBP21.43■■□□□ 1.02
CCDC43-201ENST00000315286 ATP2B4P23634 1241 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 TMED8Q6PL24 325 aaPredicted RBP21.43■■□□□ 1.02
CCDC43-201ENST00000315286 RNF214Q8ND24 703 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 ESR2Q92731 530 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 AIFM3Q96NN9 605 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 CRAMP1Q96RY5 1269 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 RCOR1Q9UKL0 485 aa21.43■■□□□ 1.02
CCDC43-201ENST00000315286 ERICH2A1L162 156 aa21.42■■□□□ 1.02
CCDC43-201ENST00000315286 LDHBP07195 334 aaKnown RBP21.42■■□□□ 1.02
CCDC43-201ENST00000315286 SYNE3Q6ZMZ3 975 aa21.42■■□□□ 1.02
CCDC43-201ENST00000315286 ZNF396Q96N95 335 aaPredicted RBP21.42■■□□□ 1.02
CCDC43-201ENST00000315286 DCP1AQ9NPI6 582 aaPredicted RBP21.42■■□□□ 1.02
CCDC43-201ENST00000315286 GGA1Q9UJY5 639 aa21.42■■□□□ 1.02
CCDC43-201ENST00000315286 RANBP6O60518 1105 aaKnown RBP21.41■■□□□ 1.02
CCDC43-201ENST00000315286 GRIK5Q16478 980 aa21.41■■□□□ 1.02
CCDC43-201ENST00000315286 ATL3Q6DD88 541 aa21.41■■□□□ 1.02
CCDC43-201ENST00000315286 EVX2Q03828 476 aa21.41■■□□□ 1.02
CCDC43-201ENST00000315286 TMTC2Q8N394 836 aa21.41■■□□□ 1.02
CCDC43-201ENST00000315286 ANP32BQ92688 251 aaKnown RBP21.41■■□□□ 1.02
CCDC43-201ENST00000315286 UBAC1Q9BSL1 405 aa21.41■■□□□ 1.02
CCDC43-201ENST00000315286 ALG1Q9BT22 464 aa21.41■■□□□ 1.02
CCDC43-201ENST00000315286 CD209Q9NNX6 404 aa21.41■■□□□ 1.02
CCDC43-201ENST00000315286 ATP8A2Q9NTI2 1148 aa21.41■■□□□ 1.02
CCDC43-201ENST00000315286 FGRP09769 529 aa21.4■■□□□ 1.02
CCDC43-201ENST00000315286 IARSP41252 1262 aaKnown RBP21.4■■□□□ 1.02
CCDC43-201ENST00000315286 NLGN1Q8N2Q7 840 aa21.4■■□□□ 1.02
CCDC43-201ENST00000315286 DUOX1Q9NRD9 1551 aa21.4■■□□□ 1.02
CCDC43-201ENST00000315286 PRDM1O75626 825 aa21.4■■□□□ 1.02
CCDC43-201ENST00000315286 CCDC173Q0VFZ6 552 aa21.4■■□□□ 1.02
CCDC43-201ENST00000315286 SEC23AQ15436 765 aa21.4■■□□□ 1.02
CCDC43-201ENST00000315286 PPP1R9BQ96SB3 815 aa21.4■■□□□ 1.02
CCDC43-201ENST00000315286 DACT1Q9NYF0 836 aa21.4■■□□□ 1.02
CCDC43-201ENST00000315286 PODXL2Q9NZ53 605 aa21.4■■□□□ 1.02
CCDC43-201ENST00000315286 POLLQ9UGP5 575 aa21.4■■□□□ 1.02
CCDC43-201ENST00000315286 ANKRD31Q8N7Z5 1873 aa21.39■■□□□ 1.02
CCDC43-201ENST00000315286 POLR3DP05423 398 aaPredicted RBP21.39■■□□□ 1.01
CCDC43-201ENST00000315286 TBC1D16Q8TBP0 767 aa21.39■■□□□ 1.01
CCDC43-201ENST00000315286 BICD2Q8TD16 824 aa21.39■■□□□ 1.01
CCDC43-201ENST00000315286 NID2Q14112 1375 aa21.39■■□□□ 1.01
CCDC43-201ENST00000315286 KIAA1551Q9HCM1 1747 aa21.39■■□□□ 1.01
CCDC43-201ENST00000315286 TNKSO95271 1327 aa21.39■■□□□ 1.01
CCDC43-201ENST00000315286 RGS22Q8NE09 1264 aa21.38■■□□□ 1.01
CCDC43-201ENST00000315286 FUCA2Q9BTY2 467 aa21.38■■□□□ 1.01
CCDC43-201ENST00000315286 ECM29Q5VYK3 1845 aa21.38■■□□□ 1.01
CCDC43-201ENST00000315286 KIF28PB7ZC32 967 aa21.38■■□□□ 1.01
CCDC43-201ENST00000315286 UBE2Q2LH0YL09 131 aa21.38■■□□□ 1.01
CCDC43-201ENST00000315286 CYP2D6P10635 497 aa21.38■■□□□ 1.01
CCDC43-201ENST00000315286 PCP11498 1178 aaKnown RBP21.38■■□□□ 1.01
CCDC43-201ENST00000315286 KIF23Q02241 960 aaPredicted RBP21.38■■□□□ 1.01
CCDC43-201ENST00000315286 DIXDC1Q155Q3 683 aa21.38■■□□□ 1.01
CCDC43-201ENST00000315286 RTN1Q16799 776 aa21.38■■□□□ 1.01
CCDC43-201ENST00000315286 ZNF654Q8IZM8 581 aa21.38■■□□□ 1.01
CCDC43-201ENST00000315286 IGSF3O75054 1194 aa21.37■■□□□ 1.01
CCDC43-201ENST00000315286 IL1R1P14778 569 aa21.37■■□□□ 1.01
CCDC43-201ENST00000315286 IFNAR1P17181 557 aa21.37■■□□□ 1.01
CCDC43-201ENST00000315286 SSRP1Q08945 709 aaKnown RBP21.37■■□□□ 1.01
CCDC43-201ENST00000315286 ZSCAN10Q96SZ4 725 aaPredicted RBP21.37■■□□□ 1.01
CCDC43-201ENST00000315286 SLC26A6Q9BXS9 759 aa21.37■■□□□ 1.01
CCDC43-201ENST00000315286 NUP62CLQ9H1M0 184 aa21.37■■□□□ 1.01
CCDC43-201ENST00000315286 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.37■■□□□ 1.01
CCDC43-201ENST00000315286 NR1I2O75469 434 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 FMNL1O95466 1100 aaPredicted RBP21.36■■□□□ 1.01
CCDC43-201ENST00000315286 RXRBP28702 533 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 CAMK4Q16566 473 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 SBK1Q52WX2 424 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 KRT40Q6A162 431 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 BRAPQ7Z569 592 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 ENAHQ8N8S7 591 aaPredicted RBP21.36■■□□□ 1.01
CCDC43-201ENST00000315286 NUP133Q8WUM0 1156 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 RTN4Q9NQC3 1192 aaKnown RBP21.36■■□□□ 1.01
CCDC43-201ENST00000315286 TAOK2Q9UL54 1235 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 GSTO1P78417 241 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 KLHL34Q8N239 644 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 FANCBQ8NB91 859 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 RTEL1Q9NZ71 1219 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 ARPP21Q9UBL0 812 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms