RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 MYH15Q9Y2K3 1946 aa19.45■□□□□ 0.7
CCDC40-201ENST00000269318 BAZ2AQ9UIF9 1905 aaKnown RBP19.45■□□□□ 0.7
CCDC40-201ENST00000269318 RXRAP19793 462 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 NFXL1Q6ZNB6 911 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 MICU3Q86XE3 530 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 DZIP1Q86YF9 867 aaKnown RBP19.44■□□□□ 0.7
CCDC40-201ENST00000269318 RGS22Q8NE09 1264 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 FLAD1Q8NFF5 587 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 SPATA32Q96LK8 384 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 CYP2D7A0A087X1C5 515 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 IL1R1P14778 569 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 GUCY1B3Q02153 619 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 NTRK3Q16288 839 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 TMC4Q7Z404 712 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 STK11IPQ8N1F8 1099 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 CRNKL1Q9BZJ0 848 aaKnown RBP19.44■□□□□ 0.7
CCDC40-201ENST00000269318 RBSNQ9H1K0 784 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 CD209Q9NNX6 404 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 DCP1AQ9NPI6 582 aaPredicted RBP19.44■□□□□ 0.7
CCDC40-201ENST00000269318 TOMM22Q9NS69 142 aa19.44■□□□□ 0.7
CCDC40-201ENST00000269318 RGPD3A6NKT7 1758 aaPredicted RBP19.43■□□□□ 0.7
CCDC40-201ENST00000269318 RGPD4Q7Z3J3 1758 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 CDKL5O76039 1030 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 LDHBP07195 334 aaKnown RBP19.43■□□□□ 0.7
CCDC40-201ENST00000269318 SART3Q15020 963 aaKnown RBP19.43■□□□□ 0.7
CCDC40-201ENST00000269318 FBXO18Q8NFZ0 1043 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 TBC1D16Q8TBP0 767 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 C8orf76Q96K31 380 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 ATP8A2Q9NTI2 1148 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 POLLQ9UGP5 575 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 CFAP45Q9UL16 551 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 SLC12A7Q9Y666 1083 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 CCDC69A6NI79 296 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 PCP11498 1178 aaKnown RBP19.43■□□□□ 0.7
CCDC40-201ENST00000269318 WTAPQ15007 396 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 GRIK5Q16478 980 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 ESR2Q92731 530 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 ZKSCAN3Q9BRR0 538 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 MYL10Q9BUA6 226 aa19.43■□□□□ 0.7
CCDC40-201ENST00000269318 GOLGA8AA7E2F4 631 aa19.42■□□□□ 0.7
CCDC40-201ENST00000269318 USP17L12C9JPN9 530 aa19.42■□□□□ 0.7
CCDC40-201ENST00000269318 USP17L21D6R901 530 aa19.42■□□□□ 0.7
CCDC40-201ENST00000269318 SEC23AQ15436 765 aa19.42■□□□□ 0.7
CCDC40-201ENST00000269318 SP8Q8IXZ3 490 aa19.42■□□□□ 0.7
CCDC40-201ENST00000269318 LAMB1P07942 1786 aa19.42■□□□□ 0.7
CCDC40-201ENST00000269318 PPEF1O14829 653 aaPredicted RBP19.41■□□□□ 0.7
CCDC40-201ENST00000269318 SRGNP10124 158 aa19.41■□□□□ 0.7
CCDC40-201ENST00000269318 NASPP49321 788 aaPredicted RBP19.41■□□□□ 0.7
CCDC40-201ENST00000269318 TPRNQ4KMQ1 711 aa19.41■□□□□ 0.7
CCDC40-201ENST00000269318 ATL3Q6DD88 541 aa19.41■□□□□ 0.7
CCDC40-201ENST00000269318 OTUD7BQ6GQQ9 843 aa19.41■□□□□ 0.7
CCDC40-201ENST00000269318 TMTC2Q8N394 836 aa19.41■□□□□ 0.7
CCDC40-201ENST00000269318 RCAN1P53805 252 aa19.41■□□□□ 0.7
CCDC40-201ENST00000269318 SBK1Q52WX2 424 aa19.41■□□□□ 0.7
CCDC40-201ENST00000269318 CPLX2Q6PUV4 134 aaKnown RBP19.41■□□□□ 0.7
CCDC40-201ENST00000269318 CCDC144CPQ8IYA2 1237 aa19.41■□□□□ 0.7
CCDC40-201ENST00000269318 PGBD1Q96JS3 809 aa19.41■□□□□ 0.7
CCDC40-201ENST00000269318 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.41■□□□□ 0.7
CCDC40-201ENST00000269318 ERICH2A1L162 156 aa19.4■□□□□ 0.7
CCDC40-201ENST00000269318 RANBP6O60518 1105 aaKnown RBP19.4■□□□□ 0.7
CCDC40-201ENST00000269318 GSTO1P78417 241 aa19.4■□□□□ 0.7
CCDC40-201ENST00000269318 ILDR2Q71H61 639 aa19.4■□□□□ 0.7
CCDC40-201ENST00000269318 UBAC1Q9BSL1 405 aa19.4■□□□□ 0.7
CCDC40-201ENST00000269318 MKRN1Q9UHC7 482 aaKnown RBP19.4■□□□□ 0.7
CCDC40-201ENST00000269318 ATP6V0A2Q9Y487 856 aa19.4■□□□□ 0.7
CCDC40-201ENST00000269318 TNKSO95271 1327 aa19.39■□□□□ 0.7
CCDC40-201ENST00000269318 LETM1O95202 739 aaPredicted RBP19.39■□□□□ 0.7
CCDC40-201ENST00000269318 MMP10P09238 476 aa19.39■□□□□ 0.7
CCDC40-201ENST00000269318 EVX2Q03828 476 aa19.39■□□□□ 0.7
CCDC40-201ENST00000269318 SYNE3Q6ZMZ3 975 aa19.39■□□□□ 0.7
CCDC40-201ENST00000269318 KLHL34Q8N239 644 aa19.39■□□□□ 0.7
CCDC40-201ENST00000269318 PHKBQ93100 1093 aa19.39■□□□□ 0.7
CCDC40-201ENST00000269318 GJB4Q9NTQ9 266 aa19.39■□□□□ 0.7
CCDC40-201ENST00000269318 ARPP21Q9UBL0 812 aaPredicted RBP19.39■□□□□ 0.7
CCDC40-201ENST00000269318 RGS17Q9UGC6 210 aaPredicted RBP19.39■□□□□ 0.7
CCDC40-201ENST00000269318 RCOR1Q9UKL0 485 aa19.39■□□□□ 0.7
CCDC40-201ENST00000269318 STK36Q9NRP7 1315 aa19.39■□□□□ 0.69
CCDC40-201ENST00000269318 ORC4O43929 436 aa19.39■□□□□ 0.69
CCDC40-201ENST00000269318 NPR1P16066 1061 aa19.39■□□□□ 0.69
CCDC40-201ENST00000269318 LIG1P18858 919 aa19.39■□□□□ 0.69
CCDC40-201ENST00000269318 PPP4CP60510 307 aa19.39■□□□□ 0.69
CCDC40-201ENST00000269318 ZNF396Q96N95 335 aaPredicted RBP19.39■□□□□ 0.69
CCDC40-201ENST00000269318 USP28Q96RU2 1077 aa19.39■□□□□ 0.69
CCDC40-201ENST00000269318 TSPY26PQ9H489 355 aa19.39■□□□□ 0.69
CCDC40-201ENST00000269318 ECM29Q5VYK3 1845 aa19.38■□□□□ 0.69
CCDC40-201ENST00000269318 COL11A2P13942 1736 aaPredicted RBP19.38■□□□□ 0.69
CCDC40-201ENST00000269318 IFNAR1P17181 557 aa19.38■□□□□ 0.69
CCDC40-201ENST00000269318 IARSP41252 1262 aaKnown RBP19.38■□□□□ 0.69
CCDC40-201ENST00000269318 DIXDC1Q155Q3 683 aa19.38■□□□□ 0.69
CCDC40-201ENST00000269318 AIFM3Q96NN9 605 aa19.38■□□□□ 0.69
CCDC40-201ENST00000269318 ZSCAN10Q96SZ4 725 aaPredicted RBP19.38■□□□□ 0.69
CCDC40-201ENST00000269318 ALG1Q9BT22 464 aa19.38■□□□□ 0.69
CCDC40-201ENST00000269318 FTOQ9C0B1 505 aaKnown RBP eCLIP19.38■□□□□ 0.69
CCDC40-201ENST00000269318 ZNF654Q8IZM8 581 aa19.37■□□□□ 0.69
CCDC40-201ENST00000269318 ENAHQ8N8S7 591 aaPredicted RBP19.37■□□□□ 0.69
CCDC40-201ENST00000269318 MROH7-TTC4A0A0A0MT08 1334 aa19.37■□□□□ 0.69
CCDC40-201ENST00000269318 C6orf229H3BNL8 230 aa19.37■□□□□ 0.69
CCDC40-201ENST00000269318 PRDM1O75626 825 aa19.37■□□□□ 0.69
CCDC40-201ENST00000269318 CYP2D6P10635 497 aa19.37■□□□□ 0.69
CCDC40-201ENST00000269318 KIF23Q02241 960 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms