RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 GOLGA6BA6NDN3 693 aa16.7■□□□□ 0.26
PDPK1-201ENST00000268673 ACTN2P35609 894 aa16.7■□□□□ 0.26
PDPK1-201ENST00000268673 HNRNPH2P55795 449 aaKnown RBP16.7■□□□□ 0.26
PDPK1-201ENST00000268673 PDE4BQ07343 736 aa16.7■□□□□ 0.26
PDPK1-201ENST00000268673 KLHDC4Q8TBB5 520 aa16.7■□□□□ 0.26
PDPK1-201ENST00000268673 SETDB2Q96T68 719 aa16.7■□□□□ 0.26
PDPK1-201ENST00000268673 NOP2P46087 812 aaKnown RBP16.7■□□□□ 0.26
PDPK1-201ENST00000268673 BEND3Q5T5X7 828 aa16.7■□□□□ 0.26
PDPK1-201ENST00000268673 KRT40Q6A162 431 aa16.7■□□□□ 0.26
PDPK1-201ENST00000268673 CCDC151A5D8V7 595 aa16.7■□□□□ 0.26
PDPK1-201ENST00000268673 RNMTO43148 476 aaKnown RBP16.7■□□□□ 0.26
PDPK1-201ENST00000268673 RXRAP19793 462 aa16.7■□□□□ 0.26
PDPK1-201ENST00000268673 PPFIA1Q13136 1202 aa16.7■□□□□ 0.26
PDPK1-201ENST00000268673 CEP57Q86XR8 500 aa16.7■□□□□ 0.26
PDPK1-201ENST00000268673 WWC3Q9ULE0 1092 aa16.7■□□□□ 0.26
PDPK1-201ENST00000268673 NIP7Q9Y221 180 aaKnown RBP eCLIP16.7■□□□□ 0.26
PDPK1-201ENST00000268673 EIF4A1P60842 406 aaKnown RBP16.7■□□□□ 0.26
PDPK1-201ENST00000268673 PNOCQ13519 176 aa16.7■□□□□ 0.26
PDPK1-201ENST00000268673 BICDL2A1A5D9 508 aa16.69■□□□□ 0.26
PDPK1-201ENST00000268673 KRT2P35908 639 aa16.69■□□□□ 0.26
PDPK1-201ENST00000268673 LONRF2Q1L5Z9 754 aa16.69■□□□□ 0.26
PDPK1-201ENST00000268673 TAOK3Q9H2K8 898 aa16.69■□□□□ 0.26
PDPK1-201ENST00000268673 RRP15Q9Y3B9 282 aaKnown RBP16.69■□□□□ 0.26
PDPK1-201ENST00000268673 SEC31AO94979 1220 aaKnown RBP16.69■□□□□ 0.26
PDPK1-201ENST00000268673 KRT9P35527 623 aa16.69■□□□□ 0.26
PDPK1-201ENST00000268673 KMT5BQ4FZB7 885 aa16.69■□□□□ 0.26
PDPK1-201ENST00000268673 METTL22Q9BUU2 404 aaPredicted RBP16.69■□□□□ 0.26
PDPK1-201ENST00000268673 TAF5LO75529 589 aa16.69■□□□□ 0.26
PDPK1-201ENST00000268673 ARHGAP25P42331 645 aa16.69■□□□□ 0.26
PDPK1-201ENST00000268673 VPS16Q9H269 839 aa16.69■□□□□ 0.26
PDPK1-201ENST00000268673 ATP2C2O75185 946 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 SCRN1Q12765 414 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 SRGAP1Q7Z6B7 1085 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 SIRT1Q96EB6 747 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 SELENOOQ9BVL4 669 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 LRRC27Q9C0I9 530 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 CFAP74Q9C0B2 1584 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 NECTIN1Q15223 517 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 DPCR1Q3MIW9 517 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 MSL1Q68DK7 614 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 TTC14Q96N46 770 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 PDE11AQ9HCR9 933 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■■■■ 89.3
PDPK1-201ENST00000268673 FANCLQ9NW38 375 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 ANKS4BQ8N8V4 417 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 PI4K2BQ8TCG2 481 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 DESI2Q9BSY9 194 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 RESTQ13127 1097 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 ZNF622Q969S3 477 aaKnown RBP eCLIP16.68■□□□□ 0.266e-6■■□□□ 13
PDPK1-201ENST00000268673 C8orf37Q96NL8 207 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 CDC23Q9UJX2 597 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 ATP7BP35670 1465 aa16.68■□□□□ 0.26
PDPK1-201ENST00000268673 UGGT1Q9NYU2 1555 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 CYP7A1P22680 504 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 TIMM10P62072 90 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 DZIP3Q86Y13 1208 aaKnown RBP16.67■□□□□ 0.26
PDPK1-201ENST00000268673 DIS3L2Q8IYB7 885 aaKnown RBP16.67■□□□□ 0.26
PDPK1-201ENST00000268673 APPBP2Q92624 585 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 ORAI2Q96SN7 254 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 EFCC1Q9HA90 598 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 MADDQ8WXG6 1647 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 SHROOM2Q13796 1616 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
PDPK1-201ENST00000268673 CRNKL1Q9BZJ0 848 aaKnown RBP16.67■□□□□ 0.26
PDPK1-201ENST00000268673 VAT1LQ9HCJ6 419 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 CABP5Q9NP86 173 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 NLRP1Q9C000 1473 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 E9PCH4 1651 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 CTIFO43310 598 aaKnown RBP16.67■□□□□ 0.26
PDPK1-201ENST00000268673 DEXIO95424 95 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 IFIT1BQ5T764 474 aaKnown RBP16.67■□□□□ 0.26
PDPK1-201ENST00000268673 TRIML1Q8N9V2 468 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 NSRP1Q9H0G5 558 aaKnown RBP16.67■□□□□ 0.26
PDPK1-201ENST00000268673 KCNF1Q9H3M0 494 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 CTNND2Q9UQB3 1225 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 ADCY9O60503 1353 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 RTL9Q8NET4 1388 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 MAP3K4Q9Y6R4 1608 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 MMRN2Q9H8L6 949 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 STX8Q9UNK0 236 aa16.67■□□□□ 0.26
PDPK1-201ENST00000268673 EYA2O00167 538 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 EDC3Q96F86 508 aaKnown RBP16.66■□□□□ 0.26
PDPK1-201ENST00000268673 MACROD2A1Z1Q3 448 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 CALM1P0DP23 149 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 CALM2P0DP24 149 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 CALM3P0DP25 149 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 TRMT44Q8IYL2 757 aaKnown RBP16.66■□□□□ 0.26
PDPK1-201ENST00000268673 JAKMIP2Q96AA8 810 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 KAT14Q9H8E8 782 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 KIF1BO60333 1816 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 GNAT2P19087 354 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 TNNC1P63316 161 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 NAA30Q147X3 362 aaPredicted RBP16.66■□□□□ 0.26
PDPK1-201ENST00000268673 NSUN7Q8NE18 718 aaKnown RBP16.66■□□□□ 0.26
PDPK1-201ENST00000268673 FBXO18Q8NFZ0 1043 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 IFT81Q8WYA0 676 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 POLR3EQ9NVU0 708 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 SLC4A4Q9Y6R1 1079 aa16.66■□□□□ 0.26
PDPK1-201ENST00000268673 CALML3P27482 149 aa16.65■□□□□ 0.26
PDPK1-201ENST00000268673 GCKRQ14397 625 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms