RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 LIFRP42702 1097 aa18.54■□□□□ 0.56
VPS26A-201ENST00000263559 GSTO1P78417 241 aa18.54■□□□□ 0.56
VPS26A-201ENST00000263559 IFFO2Q5TF58 517 aa18.54■□□□□ 0.56
VPS26A-201ENST00000263559 ZKSCAN3Q9BRR0 538 aa18.54■□□□□ 0.56
VPS26A-201ENST00000263559 ATP8A2Q9NTI2 1148 aa18.54■□□□□ 0.56
VPS26A-201ENST00000263559 DUOX1Q9NRD9 1551 aa18.54■□□□□ 0.56
VPS26A-201ENST00000263559 CAVIN1Q6NZI2 390 aaKnown RBP18.53■□□□□ 0.56
VPS26A-201ENST00000263559 FAM173BQ6P4H8 233 aa18.53■□□□□ 0.56
VPS26A-201ENST00000263559 NFXL1Q6ZNB6 911 aa18.53■□□□□ 0.56
VPS26A-201ENST00000263559 RXRAP19793 462 aa18.53■□□□□ 0.56
VPS26A-201ENST00000263559 DEFB132Q7Z7B7 95 aa18.53■□□□□ 0.56
VPS26A-201ENST00000263559 KIF3AQ9Y496 699 aa18.53■□□□□ 0.56
VPS26A-201ENST00000263559 FOSBP53539 338 aa18.52■□□□□ 0.56
VPS26A-201ENST00000263559 EVX2Q03828 476 aa18.52■□□□□ 0.56
VPS26A-201ENST00000263559 MFSD14BQ5SR56 506 aa18.52■□□□□ 0.56
VPS26A-201ENST00000263559 DPP8Q6V1X1 898 aaPredicted RBP18.52■□□□□ 0.56
VPS26A-201ENST00000263559 H0YIN7 160 aa18.52■□□□□ 0.55
VPS26A-201ENST00000263559 CPLX1O14810 134 aa18.52■□□□□ 0.55
VPS26A-201ENST00000263559 FIBPO43427 364 aa18.52■□□□□ 0.55
VPS26A-201ENST00000263559 METAP2P50579 478 aaKnown RBP eCLIP18.52■□□□□ 0.55
VPS26A-201ENST00000263559 ZC3H12CQ9C0D7 883 aaKnown RBP18.52■□□□□ 0.55
VPS26A-201ENST00000263559 LDHCP07864 332 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 ADD1P35611 737 aaKnown RBP18.51■□□□□ 0.55
VPS26A-201ENST00000263559 SF3B2Q13435 895 aaKnown RBP18.51■□□□□ 0.55
VPS26A-201ENST00000263559 SH3RF3Q8TEJ3 882 aaPredicted RBP18.51■□□□□ 0.55
VPS26A-201ENST00000263559 ESR2Q92731 530 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 PDGFDQ9GZP0 370 aaPredicted RBP18.51■□□□□ 0.55
VPS26A-201ENST00000263559 COA1Q9GZY4 146 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 LAMB1P07942 1786 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 ZBTB43O43298 467 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 MBD3O95983 291 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 FGRP09769 529 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 PPP4CP60510 307 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 GTF2IP78347 998 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 SART3Q15020 963 aaKnown RBP18.51■□□□□ 0.55
VPS26A-201ENST00000263559 MICU3Q86XE3 530 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 MTA3Q9BTC8 594 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 MYL10Q9BUA6 226 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 TMX4Q9H1E5 349 aaPredicted RBP18.51■□□□□ 0.55
VPS26A-201ENST00000263559 RBM27Q9P2N5 1060 aaKnown RBP18.51■□□□□ 0.55
VPS26A-201ENST00000263559 MROH7-TTC4A0A0A0MT08 1334 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 FAM205AQ6ZU69 1335 aa18.51■□□□□ 0.55
VPS26A-201ENST00000263559 CCDC69A6NI79 296 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 BAG3O95817 575 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 CDC27P30260 824 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 BAG6P46379 1132 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 RESTQ13127 1097 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 TBC1D22AQ8WUA7 517 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 SLC12A7Q9Y666 1083 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 PRDM1O75626 825 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 CYP2D6P10635 497 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 CHRNA5P30532 468 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 WTAPQ15007 396 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 SBK1Q52WX2 424 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 STYK1Q6J9G0 422 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 CCDC144CPQ8IYA2 1237 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 RTFDC1Q9BY42 306 aaPredicted RBP18.5■□□□□ 0.55
VPS26A-201ENST00000263559 ARPP21Q9UBL0 812 aaPredicted RBP18.5■□□□□ 0.55
VPS26A-201ENST00000263559 MKRN1Q9UHC7 482 aaKnown RBP18.5■□□□□ 0.55
VPS26A-201ENST00000263559 SLX4Q8IY92 1834 aa18.5■□□□□ 0.55
VPS26A-201ENST00000263559 ERICH2A1L162 156 aa18.49■□□□□ 0.55
VPS26A-201ENST00000263559 FSD2A1L4K1 749 aa18.49■□□□□ 0.55
VPS26A-201ENST00000263559 NOL10Q9BSC4 688 aaKnown RBP18.49■□□□□ 0.55
VPS26A-201ENST00000263559 ORC3Q9UBD5 711 aaPredicted RBP18.49■□□□□ 0.55
VPS26A-201ENST00000263559 GOLGA6L3A6NEY3 463 aa18.49■□□□□ 0.55
VPS26A-201ENST00000263559 USP5P45974 858 aa18.49■□□□□ 0.55
VPS26A-201ENST00000263559 KRT85P78386 507 aa18.49■□□□□ 0.55
VPS26A-201ENST00000263559 MCM9Q9NXL9 1143 aa18.49■□□□□ 0.55
VPS26A-201ENST00000263559 USP17L8P0C7I0 530 aa18.48■□□□□ 0.55
VPS26A-201ENST00000263559 PCP11498 1178 aaKnown RBP18.48■□□□□ 0.55
VPS26A-201ENST00000263559 DOK7Q18PE1 504 aa18.48■□□□□ 0.55
VPS26A-201ENST00000263559 UBAC1Q9BSL1 405 aa18.48■□□□□ 0.55
VPS26A-201ENST00000263559 ZSCAN16Q9H4T2 348 aaPredicted RBP18.48■□□□□ 0.55
VPS26A-201ENST00000263559 FAM217BQ9NTX9 383 aaPredicted RBP18.48■□□□□ 0.55
VPS26A-201ENST00000263559 TMEM63CQ9P1W3 806 aa18.48■□□□□ 0.55
VPS26A-201ENST00000263559 GOLGA8AA7E2F4 631 aa18.48■□□□□ 0.55
VPS26A-201ENST00000263559 RANBP6O60518 1105 aaKnown RBP18.48■□□□□ 0.55
VPS26A-201ENST00000263559 BTDP43251 543 aa18.48■□□□□ 0.55
VPS26A-201ENST00000263559 GUCY1B3Q02153 619 aa18.48■□□□□ 0.55
VPS26A-201ENST00000263559 TMTC2Q8N394 836 aa18.48■□□□□ 0.55
VPS26A-201ENST00000263559 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.48■□□□□ 0.55
VPS26A-201ENST00000263559 CDK5RAP2Q96SN8 1893 aa18.48■□□□□ 0.55
VPS26A-201ENST00000263559 SEC23AQ15436 765 aa18.47■□□□□ 0.55
VPS26A-201ENST00000263559 ZSCAN23Q3MJ62 389 aa18.47■□□□□ 0.55
VPS26A-201ENST00000263559 SYNE3Q6ZMZ3 975 aa18.47■□□□□ 0.55
VPS26A-201ENST00000263559 TNKSO95271 1327 aa18.47■□□□□ 0.55
VPS26A-201ENST00000263559 GPR75-ASB3A0A0A6YYF3 556 aa18.47■□□□□ 0.55
VPS26A-201ENST00000263559 NTRK3Q16288 839 aa18.47■□□□□ 0.55
VPS26A-201ENST00000263559 CSPP1Q1MSJ5 1256 aa18.47■□□□□ 0.55
VPS26A-201ENST00000263559 SLC4A8Q2Y0W8 1093 aa18.47■□□□□ 0.55
VPS26A-201ENST00000263559 GAS2L3Q86XJ1 694 aa18.47■□□□□ 0.55
VPS26A-201ENST00000263559 TGFBRAP1Q8WUH2 860 aa18.47■□□□□ 0.55
VPS26A-201ENST00000263559 TFIP11Q9UBB9 837 aaKnown RBP18.47■□□□□ 0.55
VPS26A-201ENST00000263559 UBE2HP62256 183 aa18.46■□□□□ 0.55
VPS26A-201ENST00000263559 TPRNQ4KMQ1 711 aa18.46■□□□□ 0.55
VPS26A-201ENST00000263559 FBXW7Q969H0 707 aa18.46■□□□□ 0.55
VPS26A-201ENST00000263559 FAM163AQ96GL9 167 aaPredicted RBP18.46■□□□□ 0.55
VPS26A-201ENST00000263559 ZSCAN10Q96SZ4 725 aaPredicted RBP18.46■□□□□ 0.55
VPS26A-201ENST00000263559 ZNF219Q9P2Y4 722 aaPredicted RBP18.46■□□□□ 0.55
VPS26A-201ENST00000263559 MYH15Q9Y2K3 1946 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms