RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 CRNKL1Q9BZJ0 848 aaKnown RBP28.07■■■□□ 2.08
TSPAN13-201ENST00000262067 FAM217BQ9NTX9 383 aaPredicted RBP28.07■■■□□ 2.08
TSPAN13-201ENST00000262067 LDHBP07195 334 aaKnown RBP28.06■■■□□ 2.08
TSPAN13-201ENST00000262067 SART3Q15020 963 aaKnown RBP28.06■■■□□ 2.08
TSPAN13-201ENST00000262067 PODXL2Q9NZ53 605 aa28.06■■■□□ 2.08
TSPAN13-201ENST00000262067 GOLGA8AA7E2F4 631 aa28.06■■■□□ 2.08
TSPAN13-201ENST00000262067 USP17L12C9JPN9 530 aa28.06■■■□□ 2.08
TSPAN13-201ENST00000262067 USP17L21D6R901 530 aa28.06■■■□□ 2.08
TSPAN13-201ENST00000262067 NASPP49321 788 aaPredicted RBP28.06■■■□□ 2.08
TSPAN13-201ENST00000262067 GRIK5Q16478 980 aa28.06■■■□□ 2.08
TSPAN13-201ENST00000262067 MTA3Q9BTC8 594 aa28.06■■■□□ 2.08
TSPAN13-201ENST00000262067 CD209Q9NNX6 404 aa28.06■■■□□ 2.08
TSPAN13-201ENST00000262067 DCP1AQ9NPI6 582 aaPredicted RBP28.06■■■□□ 2.08
TSPAN13-201ENST00000262067 WTAPQ15007 396 aa28.05■■■□□ 2.08
TSPAN13-201ENST00000262067 ILDR1Q86SU0 546 aaPredicted RBP28.05■■■□□ 2.08
TSPAN13-201ENST00000262067 FBXO18Q8NFZ0 1043 aa28.05■■■□□ 2.08
TSPAN13-201ENST00000262067 POLLQ9UGP5 575 aa28.05■■■□□ 2.08
TSPAN13-201ENST00000262067 CFAP45Q9UL16 551 aa28.05■■■□□ 2.08
TSPAN13-201ENST00000262067 NTRK3Q16288 839 aa28.04■■■□□ 2.08
TSPAN13-201ENST00000262067 TBC1D16Q8TBP0 767 aa28.04■■■□□ 2.08
TSPAN13-201ENST00000262067 ESR2Q92731 530 aa28.04■■■□□ 2.08
TSPAN13-201ENST00000262067 MAST2Q6P0Q8 1798 aa28.04■■■□□ 2.08
TSPAN13-201ENST00000262067 CDKL5O76039 1030 aa28.04■■■□□ 2.08
TSPAN13-201ENST00000262067 ATP8A2Q9NTI2 1148 aa28.04■■■□□ 2.08
TSPAN13-201ENST00000262067 GJB4Q9NTQ9 266 aa28.04■■■□□ 2.08
TSPAN13-201ENST00000262067 ERICH2A1L162 156 aa28.03■■■□□ 2.08
TSPAN13-201ENST00000262067 CPLX2Q6PUV4 134 aaKnown RBP28.03■■■□□ 2.08
TSPAN13-201ENST00000262067 SYNE3Q6ZMZ3 975 aa28.03■■■□□ 2.08
TSPAN13-201ENST00000262067 FLAD1Q8NFF5 587 aa28.03■■■□□ 2.08
TSPAN13-201ENST00000262067 PHKBQ93100 1093 aa28.03■■■□□ 2.08
TSPAN13-201ENST00000262067 BAZ2AQ9UIF9 1905 aaKnown RBP28.02■■■□□ 2.08
TSPAN13-201ENST00000262067 IGSF3O75054 1194 aa28.02■■■□□ 2.08
TSPAN13-201ENST00000262067 FGRP09769 529 aa28.02■■■□□ 2.08
TSPAN13-201ENST00000262067 IL1R1P14778 569 aa28.02■■■□□ 2.08
TSPAN13-201ENST00000262067 CEBPZQ03701 1054 aaKnown RBP28.02■■■□□ 2.08
TSPAN13-201ENST00000262067 EVX2Q03828 476 aa28.02■■■□□ 2.08
TSPAN13-201ENST00000262067 TMTC2Q8N394 836 aa28.02■■■□□ 2.08
TSPAN13-201ENST00000262067 PGBD1Q96JS3 809 aa28.02■■■□□ 2.08
TSPAN13-201ENST00000262067 UBAC1Q9BSL1 405 aa28.02■■■□□ 2.08
TSPAN13-201ENST00000262067 CCDC88AQ3V6T2 1871 aa28.02■■■□□ 2.08
TSPAN13-201ENST00000262067 PPEF1O14829 653 aaPredicted RBP28.01■■■□□ 2.07
TSPAN13-201ENST00000262067 SP8Q8IXZ3 490 aa28.01■■■□□ 2.07
TSPAN13-201ENST00000262067 AIFM3Q96NN9 605 aa28.01■■■□□ 2.07
TSPAN13-201ENST00000262067 FTOQ9C0B1 505 aaKnown RBP eCLIP28.01■■■□□ 2.07
TSPAN13-201ENST00000262067 TSPY26PQ9H489 355 aa28.01■■■□□ 2.07
TSPAN13-201ENST00000262067 GOLGA6L4A6NEF3 574 aa28.01■■■□□ 2.07
TSPAN13-201ENST00000262067 PRDM1O75626 825 aa28.01■■■□□ 2.07
TSPAN13-201ENST00000262067 LETM1O95202 739 aaPredicted RBP28.01■■■□□ 2.07
TSPAN13-201ENST00000262067 RANBP6O60518 1105 aaKnown RBP28■■■□□ 2.07
TSPAN13-201ENST00000262067 MMP10P09238 476 aa28■■■□□ 2.07
TSPAN13-201ENST00000262067 LIG1P18858 919 aa28■■■□□ 2.07
TSPAN13-201ENST00000262067 SEC23AQ15436 765 aa28■■■□□ 2.07
TSPAN13-201ENST00000262067 DIXDC1Q155Q3 683 aa28■■■□□ 2.07
TSPAN13-201ENST00000262067 TMC4Q7Z404 712 aa28■■■□□ 2.07
TSPAN13-201ENST00000262067 ZNF396Q96N95 335 aaPredicted RBP28■■■□□ 2.07
TSPAN13-201ENST00000262067 USP28Q96RU2 1077 aa28■■■□□ 2.07
TSPAN13-201ENST00000262067 ALG1Q9BT22 464 aa28■■■□□ 2.07
TSPAN13-201ENST00000262067 C6orf229H3BNL8 230 aa27.99■■■□□ 2.07
TSPAN13-201ENST00000262067 SRGNP10124 158 aa27.99■■■□□ 2.07
TSPAN13-201ENST00000262067 ATL3Q6DD88 541 aa27.99■■■□□ 2.07
TSPAN13-201ENST00000262067 ANKRD31Q8N7Z5 1873 aa27.99■■■□□ 2.07
TSPAN13-201ENST00000262067 DUOX1Q9NRD9 1551 aa27.99■■■□□ 2.07
TSPAN13-201ENST00000262067 RCOR1Q9UKL0 485 aa27.99■■■□□ 2.07
TSPAN13-201ENST00000262067 NID2Q14112 1375 aa27.99■■■□□ 2.07
TSPAN13-201ENST00000262067 TNKSO95271 1327 aa27.99■■■□□ 2.07
TSPAN13-201ENST00000262067 CYP2D6P10635 497 aa27.99■■■□□ 2.07
TSPAN13-201ENST00000262067 PCP11498 1178 aaKnown RBP27.99■■■□□ 2.07
TSPAN13-201ENST00000262067 IARSP41252 1262 aaKnown RBP27.99■■■□□ 2.07
TSPAN13-201ENST00000262067 GSTO1P78417 241 aa27.99■■■□□ 2.07
TSPAN13-201ENST00000262067 SBK1Q52WX2 424 aa27.98■■■□□ 2.07
TSPAN13-201ENST00000262067 ATP6V0A2Q9Y487 856 aa27.98■■■□□ 2.07
TSPAN13-201ENST00000262067 ZSCAN10Q96SZ4 725 aaPredicted RBP27.98■■■□□ 2.07
TSPAN13-201ENST00000262067 ARPP21Q9UBL0 812 aaPredicted RBP27.98■■■□□ 2.07
TSPAN13-201ENST00000262067 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.98■■■□□ 2.07
TSPAN13-201ENST00000262067 PARP3Q9Y6F1 533 aa27.98■■■□□ 2.07
TSPAN13-201ENST00000262067 NRXN2Q9P2S2 1712 aa27.97■■■□□ 2.07
TSPAN13-201ENST00000262067 MSL1Q68DK7 614 aa27.97■■■□□ 2.07
TSPAN13-201ENST00000262067 ZNF654Q8IZM8 581 aa27.97■■■□□ 2.07
TSPAN13-201ENST00000262067 RGS22Q8NE09 1264 aa27.97■■■□□ 2.07
TSPAN13-201ENST00000262067 SH3RF3Q8TEJ3 882 aaPredicted RBP27.97■■■□□ 2.07
TSPAN13-201ENST00000262067 NPR1P16066 1061 aa27.96■■■□□ 2.07
TSPAN13-201ENST00000262067 RTN1Q16799 776 aa27.96■■■□□ 2.07
TSPAN13-201ENST00000262067 ENAHQ8N8S7 591 aaPredicted RBP27.96■■■□□ 2.07
TSPAN13-201ENST00000262067 MYH15Q9Y2K3 1946 aa27.96■■■□□ 2.07
TSPAN13-201ENST00000262067 POLR3DP05423 398 aaPredicted RBP27.96■■■□□ 2.07
TSPAN13-201ENST00000262067 IFNAR1P17181 557 aa27.96■■■□□ 2.07
TSPAN13-201ENST00000262067 SLC26A6Q9BXS9 759 aa27.96■■■□□ 2.07
TSPAN13-201ENST00000262067 MCM9Q9NXL9 1143 aa27.96■■■□□ 2.07
TSPAN13-201ENST00000262067 MKRN1Q9UHC7 482 aaKnown RBP27.96■■■□□ 2.07
TSPAN13-201ENST00000262067 KIAA1551Q9HCM1 1747 aa27.95■■■□□ 2.07
TSPAN13-201ENST00000262067 KIF28PB7ZC32 967 aa27.95■■■□□ 2.07
TSPAN13-201ENST00000262067 LDHCP07864 332 aa27.95■■■□□ 2.07
TSPAN13-201ENST00000262067 USP17L8P0C7I0 530 aa27.95■■■□□ 2.07
TSPAN13-201ENST00000262067 PPP4CP60510 307 aa27.95■■■□□ 2.07
TSPAN13-201ENST00000262067 SSRP1Q08945 709 aaKnown RBP27.95■■■□□ 2.07
TSPAN13-201ENST00000262067 RGS17Q9UGC6 210 aaPredicted RBP27.95■■■□□ 2.07
TSPAN13-201ENST00000262067 UBE2Q2LH0YL09 131 aa27.95■■■□□ 2.06
TSPAN13-201ENST00000262067 ORC4O43929 436 aa27.95■■■□□ 2.06
TSPAN13-201ENST00000262067 FMNL1O95466 1100 aaPredicted RBP27.95■■■□□ 2.06
TSPAN13-201ENST00000262067 BAG3O95817 575 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms