RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 GOLGA1Q92805 767 aa18.23■□□□□ 0.51
LMNB1-201ENST00000261366 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
LMNB1-201ENST00000261366 RFX7Q2KHR2 1363 aa18.23■□□□□ 0.51
LMNB1-201ENST00000261366 ANKRD65E5RJM6 399 aa18.22■□□□□ 0.51
LMNB1-201ENST00000261366 CMTR1Q8N1G2 835 aaKnown RBP18.22■□□□□ 0.51
LMNB1-201ENST00000261366 B4E1Z4 1266 aa18.22■□□□□ 0.51
LMNB1-201ENST00000261366 POLR2DO15514 142 aaKnown RBP18.22■□□□□ 0.51
LMNB1-201ENST00000261366 GPAA1O43292 621 aa18.22■□□□□ 0.51
LMNB1-201ENST00000261366 CASP7P55210 303 aa18.22■□□□□ 0.51
LMNB1-201ENST00000261366 TRDNQ13061 729 aa18.22■□□□□ 0.51
LMNB1-201ENST00000261366 SPECC1LQ69YQ0 1117 aa18.22■□□□□ 0.51
LMNB1-201ENST00000261366 CYB5R4Q7L1T6 521 aa18.22■□□□□ 0.51
LMNB1-201ENST00000261366 LRP10Q7Z4F1 713 aa18.22■□□□□ 0.51
LMNB1-201ENST00000261366 JMYQ8N9B5 988 aa18.22■□□□□ 0.51
LMNB1-201ENST00000261366 DNAJC5Q9H3Z4 198 aa18.22■□□□□ 0.51
LMNB1-201ENST00000261366 CEP126Q9P2H0 1117 aa18.22■□□□□ 0.51
LMNB1-201ENST00000261366 MRC1P22897 1456 aa18.22■□□□□ 0.51
LMNB1-201ENST00000261366 EYA2O00167 538 aa18.21■□□□□ 0.51
LMNB1-201ENST00000261366 TATP17735 454 aaPredicted RBP18.21■□□□□ 0.51
LMNB1-201ENST00000261366 CASP1P29466 404 aa18.21■□□□□ 0.51
LMNB1-201ENST00000261366 IL15P40933 162 aaPredicted RBP18.21■□□□□ 0.51
LMNB1-201ENST00000261366 PTPAQ15257 358 aa18.21■□□□□ 0.51
LMNB1-201ENST00000261366 KIFC2Q96AC6 838 aa18.21■□□□□ 0.51
LMNB1-201ENST00000261366 SLC26A6Q9BXS9 759 aa18.21■□□□□ 0.51
LMNB1-201ENST00000261366 KCNJ14Q9UNX9 436 aa18.21■□□□□ 0.51
LMNB1-201ENST00000261366 HPSEQ9Y251 543 aa18.21■□□□□ 0.51
LMNB1-201ENST00000261366 TEX33O43247 280 aa18.21■□□□□ 0.51
LMNB1-201ENST00000261366 CHMP4BP1P59074 171 aa18.21■□□□□ 0.51
LMNB1-201ENST00000261366 TRIM29Q14134 588 aa18.21■□□□□ 0.51
LMNB1-201ENST00000261366 RSPH14Q9UHP6 348 aa18.2■□□□□ 0.5
LMNB1-201ENST00000261366 SERTAD1Q9UHV2 236 aa18.2■□□□□ 0.5
LMNB1-201ENST00000261366 MAN1B1Q9UKM7 699 aa18.2■□□□□ 0.5
LMNB1-201ENST00000261366 DHX8Q14562 1220 aaKnown RBP18.2■□□□□ 0.5
LMNB1-201ENST00000261366 RSRC2Q7L4I2 434 aaKnown RBP18.2■□□□□ 0.5
LMNB1-201ENST00000261366 XAGE2Q96GT9 111 aa18.2■□□□□ 0.5
LMNB1-201ENST00000261366 A1BGP04217 495 aa18.2■□□□□ 0.5
LMNB1-201ENST00000261366 PDE4CQ08493 712 aa18.2■□□□□ 0.5
LMNB1-201ENST00000261366 RESP18Q5W5W9 173 aa18.2■□□□□ 0.5
LMNB1-201ENST00000261366 TBC1D10CQ8IV04 446 aa18.2■□□□□ 0.5
LMNB1-201ENST00000261366 CHMP4CQ96CF2 233 aa18.2■□□□□ 0.5
LMNB1-201ENST00000261366 AK7Q96M32 723 aa18.2■□□□□ 0.5
LMNB1-201ENST00000261366 PLEKHA4Q9H4M7 779 aa18.2■□□□□ 0.5
LMNB1-201ENST00000261366 BTBD18B2RXH4 712 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 PHKG2P15735 406 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 TXLNAP40222 546 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 FAM193AP78312 1265 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 ZNF569Q5MCW4 686 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 USP49Q70CQ1 688 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 SEC31BQ9NQW1 1179 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 TRPM3Q9HCF6 1732 aaPredicted RBP18.19■□□□□ 0.5
LMNB1-201ENST00000261366 MYO1CO00159 1063 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 STX10O60499 249 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 ABL1P00519 1130 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 IARSP41252 1262 aaKnown RBP18.19■□□□□ 0.5
LMNB1-201ENST00000261366 KIF4BQ2VIQ3 1234 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 FOXR1Q6PIV2 292 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 PLBD2Q8NHP8 589 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 RABGGTAQ92696 567 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 PNKPQ96T60 521 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 MAP3K14Q99558 947 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 TEX13AQ9BXU3 409 aaPredicted RBP18.19■□□□□ 0.5
LMNB1-201ENST00000261366 TOMM22Q9NS69 142 aa18.19■□□□□ 0.5
LMNB1-201ENST00000261366 CWC25Q9NXE8 425 aaPredicted RBP18.19■□□□□ 0.5
LMNB1-201ENST00000261366 POSTNQ15063 836 aa18.18■□□□□ 0.5
LMNB1-201ENST00000261366 TAF7LQ5H9L4 462 aa18.18■□□□□ 0.5
LMNB1-201ENST00000261366 SMYD4Q8IYR2 804 aaPredicted RBP18.18■□□□□ 0.5
LMNB1-201ENST00000261366 UBXN6Q9BZV1 441 aa18.18■□□□□ 0.5
LMNB1-201ENST00000261366 ANGEL1Q9UNK9 670 aaKnown RBP18.18■□□□□ 0.5
LMNB1-201ENST00000261366 LMO7Q8WWI1 1683 aa18.18■□□□□ 0.5
LMNB1-201ENST00000261366 PHRF1Q9P1Y6 1649 aaKnown RBP18.18■□□□□ 0.5
LMNB1-201ENST00000261366 IDH1O75874 414 aaKnown RBP18.18■□□□□ 0.5
LMNB1-201ENST00000261366 AFMP43652 599 aa18.18■□□□□ 0.5
LMNB1-201ENST00000261366 CCDC102AQ96A19 550 aa18.18■□□□□ 0.5
LMNB1-201ENST00000261366 ZKSCAN3Q9BRR0 538 aa18.18■□□□□ 0.5
LMNB1-201ENST00000261366 RAI14Q9P0K7 980 aa18.18■□□□□ 0.5
LMNB1-201ENST00000261366 GOLGA8AA7E2F4 631 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 NBPF26B4DH59 902 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 RANBP6O60518 1105 aaKnown RBP18.17■□□□□ 0.5
LMNB1-201ENST00000261366 GUCY1A2P33402 732 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 SLC9C2Q5TAH2 1124 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 NBPF14Q5TI25 921 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 NBPF10Q6P3W6 841 aaKnown RBP18.17■□□□□ 0.5
LMNB1-201ENST00000261366 RAD9BQ6WBX8 426 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 NBPF15Q8N660 670 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 CDC5LQ99459 802 aaKnown RBP18.17■□□□□ 0.5
LMNB1-201ENST00000261366 NBPF3Q9H094 633 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 KDM6AO15550 1401 aaPredicted RBP18.17■□□□□ 0.5
LMNB1-201ENST00000261366 CCDC175P0C221 793 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 CABP4P57796 275 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 TBX2Q13207 712 aaPredicted RBP18.17■□□□□ 0.5
LMNB1-201ENST00000261366 RRP12Q5JTH9 1297 aaKnown RBP18.17■□□□□ 0.5
LMNB1-201ENST00000261366 JAKMIP3Q5VZ66 844 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 APOA5Q6Q788 366 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 FCHSD1Q86WN1 690 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 MED15Q96RN5 788 aa18.17■□□□□ 0.5
LMNB1-201ENST00000261366 PPP6R2O75170 966 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 KRI1Q8N9T8 703 aaKnown RBP18.16■□□□□ 0.5
LMNB1-201ENST00000261366 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.16■□□□□ 0.5
LMNB1-201ENST00000261366 RASSF4Q9H2L5 321 aa18.16■□□□□ 0.5
LMNB1-201ENST00000261366 FAN1Q9Y2M0 1017 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms