RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 GJB4Q9NTQ9 266 aa21.58■■□□□ 1.05
HOXC11-201ENST00000243082 AATFQ9NY61 560 aaKnown RBP eCLIP21.58■■□□□ 1.05
HOXC11-201ENST00000243082 CYP2D7A0A087X1C5 515 aa21.58■■□□□ 1.04
HOXC11-201ENST00000243082 HOXA10P31260 410 aaPredicted RBP21.58■■□□□ 1.04
HOXC11-201ENST00000243082 CEBPZQ03701 1054 aaKnown RBP21.58■■□□□ 1.04
HOXC11-201ENST00000243082 SART3Q15020 963 aaKnown RBP21.58■■□□□ 1.04
HOXC11-201ENST00000243082 SPTY2D1Q68D10 685 aaPredicted RBP21.58■■□□□ 1.04
HOXC11-201ENST00000243082 ZNF396Q96N95 335 aaPredicted RBP21.58■■□□□ 1.04
HOXC11-201ENST00000243082 GPR101Q96P66 508 aaPredicted RBP21.58■■□□□ 1.04
HOXC11-201ENST00000243082 NID2Q14112 1375 aa21.57■■□□□ 1.04
HOXC11-201ENST00000243082 KLRG2A4D1S0 409 aaPredicted RBP21.57■■□□□ 1.04
HOXC11-201ENST00000243082 WTAPQ15007 396 aa21.57■■□□□ 1.04
HOXC11-201ENST00000243082 CPLX2Q6PUV4 134 aaKnown RBP21.57■■□□□ 1.04
HOXC11-201ENST00000243082 RNF214Q8ND24 703 aa21.57■■□□□ 1.04
HOXC11-201ENST00000243082 ANP32BQ92688 251 aaKnown RBP21.57■■□□□ 1.04
HOXC11-201ENST00000243082 FUCA2Q9BTY2 467 aa21.57■■□□□ 1.04
HOXC11-201ENST00000243082 BAZ2AQ9UIF9 1905 aaKnown RBP21.57■■□□□ 1.04
HOXC11-201ENST00000243082 FGRP09769 529 aa21.56■■□□□ 1.04
HOXC11-201ENST00000243082 HMGB2P26583 209 aaKnown RBP21.56■■□□□ 1.04
HOXC11-201ENST00000243082 ZNF827Q17R98 1081 aa21.56■■□□□ 1.04
HOXC11-201ENST00000243082 WDR66Q8TBY9 1149 aa21.56■■□□□ 1.04
HOXC11-201ENST00000243082 ESR2Q92731 530 aa21.56■■□□□ 1.04
HOXC11-201ENST00000243082 PHKBQ93100 1093 aa21.56■■□□□ 1.04
HOXC11-201ENST00000243082 MAST2Q6P0Q8 1798 aa21.56■■□□□ 1.04
HOXC11-201ENST00000243082 PLSCR1O15162 318 aa21.56■■□□□ 1.04
HOXC11-201ENST00000243082 RANBP6O60518 1105 aaKnown RBP21.56■■□□□ 1.04
HOXC11-201ENST00000243082 BBOX1O75936 387 aa21.56■■□□□ 1.04
HOXC11-201ENST00000243082 ZNF772Q68DY9 489 aaPredicted RBP21.56■■□□□ 1.04
HOXC11-201ENST00000243082 ZNF804AQ7Z570 1209 aa21.56■■□□□ 1.04
HOXC11-201ENST00000243082 TMTC2Q8N394 836 aa21.56■■□□□ 1.04
HOXC11-201ENST00000243082 AIFM3Q96NN9 605 aa21.56■■□□□ 1.04
HOXC11-201ENST00000243082 CRNKL1Q9BZJ0 848 aaKnown RBP21.56■■□□□ 1.04
HOXC11-201ENST00000243082 DCP1AQ9NPI6 582 aaPredicted RBP21.56■■□□□ 1.04
HOXC11-201ENST00000243082 CCDC88AQ3V6T2 1871 aa21.55■■□□□ 1.04
HOXC11-201ENST00000243082 USP17L12C9JPN9 530 aa21.55■■□□□ 1.04
HOXC11-201ENST00000243082 USP17L21D6R901 530 aa21.55■■□□□ 1.04
HOXC11-201ENST00000243082 SYNE3Q6ZMZ3 975 aa21.55■■□□□ 1.04
HOXC11-201ENST00000243082 ALG1Q9BT22 464 aa21.55■■□□□ 1.04
HOXC11-201ENST00000243082 DACT1Q9NYF0 836 aa21.55■■□□□ 1.04
HOXC11-201ENST00000243082 ERICH2A1L162 156 aa21.55■■□□□ 1.04
HOXC11-201ENST00000243082 IGSF3O75054 1194 aa21.55■■□□□ 1.04
HOXC11-201ENST00000243082 ATP2B4P23634 1241 aa21.55■■□□□ 1.04
HOXC11-201ENST00000243082 SEC23AQ15436 765 aa21.55■■□□□ 1.04
HOXC11-201ENST00000243082 DZIP1Q86YF9 867 aaKnown RBP21.55■■□□□ 1.04
HOXC11-201ENST00000243082 AKT1S1Q96B36 256 aa21.55■■□□□ 1.04
HOXC11-201ENST00000243082 CRAMP1Q96RY5 1269 aa21.55■■□□□ 1.04
HOXC11-201ENST00000243082 ATP8A2Q9NTI2 1148 aa21.55■■□□□ 1.04
HOXC11-201ENST00000243082 DUOX1Q9NRD9 1551 aa21.54■■□□□ 1.04
HOXC11-201ENST00000243082 UFL1O94874 794 aa21.54■■□□□ 1.04
HOXC11-201ENST00000243082 IARSP41252 1262 aaKnown RBP21.54■■□□□ 1.04
HOXC11-201ENST00000243082 KIF28PB7ZC32 967 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 LDHBP07195 334 aaKnown RBP21.53■■□□□ 1.04
HOXC11-201ENST00000243082 PCP11498 1178 aaKnown RBP21.53■■□□□ 1.04
HOXC11-201ENST00000243082 KIF23Q02241 960 aaPredicted RBP21.53■■□□□ 1.04
HOXC11-201ENST00000243082 GRIK5Q16478 980 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 BICD2Q8TD16 824 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 UBAC1Q9BSL1 405 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 NUP62CLQ9H1M0 184 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 PODXL2Q9NZ53 605 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 RTEL1Q9NZ71 1219 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 GGA1Q9UJY5 639 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 NR1I2O75469 434 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 POLR3DP05423 398 aaPredicted RBP21.53■■□□□ 1.04
HOXC11-201ENST00000243082 IFNAR1P17181 557 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 RCAN1P53805 252 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 EVX2Q03828 476 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 BRAPQ7Z569 592 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 COL23A1Q86Y22 540 aaPredicted RBP21.53■■□□□ 1.04
HOXC11-201ENST00000243082 PDLIM2Q96JY6 352 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 CD209Q9NNX6 404 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 RTN4Q9NQC3 1192 aaKnown RBP21.53■■□□□ 1.04
HOXC11-201ENST00000243082 DDX19AQ9NUU7 478 aaKnown RBP21.53■■□□□ 1.04
HOXC11-201ENST00000243082 TNKSO95271 1327 aa21.53■■□□□ 1.04
HOXC11-201ENST00000243082 APBA3O96018 575 aa21.52■■□□□ 1.04
HOXC11-201ENST00000243082 FAM43AQ8N2R8 423 aa21.52■■□□□ 1.04
HOXC11-201ENST00000243082 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.52■■□□□ 1.04
HOXC11-201ENST00000243082 STK36Q9NRP7 1315 aa21.52■■□□□ 1.04
HOXC11-201ENST00000243082 FMNL1O95466 1100 aaPredicted RBP21.51■■□□□ 1.03
HOXC11-201ENST00000243082 RTN1Q16799 776 aa21.51■■□□□ 1.03
HOXC11-201ENST00000243082 SBK1Q52WX2 424 aa21.51■■□□□ 1.03
HOXC11-201ENST00000243082 MYSM1Q5VVJ2 828 aa21.51■■□□□ 1.03
HOXC11-201ENST00000243082 KRT40Q6A162 431 aa21.51■■□□□ 1.03
HOXC11-201ENST00000243082 ZNF654Q8IZM8 581 aa21.51■■□□□ 1.03
HOXC11-201ENST00000243082 KIAA1551Q9HCM1 1747 aa21.51■■□□□ 1.03
HOXC11-201ENST00000243082 UBE2Q2LH0YL09 131 aa21.51■■□□□ 1.03
HOXC11-201ENST00000243082 PRDM1O75626 825 aa21.51■■□□□ 1.03
HOXC11-201ENST00000243082 IL1R1P14778 569 aa21.51■■□□□ 1.03
HOXC11-201ENST00000243082 SSRP1Q08945 709 aaKnown RBP21.51■■□□□ 1.03
HOXC11-201ENST00000243082 CAMK4Q16566 473 aa21.51■■□□□ 1.03
HOXC11-201ENST00000243082 ENAHQ8N8S7 591 aaPredicted RBP21.51■■□□□ 1.03
HOXC11-201ENST00000243082 ZSCAN10Q96SZ4 725 aaPredicted RBP21.51■■□□□ 1.03
HOXC11-201ENST00000243082 SLC26A6Q9BXS9 759 aa21.51■■□□□ 1.03
HOXC11-201ENST00000243082 POLLQ9UGP5 575 aa21.51■■□□□ 1.03
HOXC11-201ENST00000243082 MYH2Q9UKX2 1941 aa21.5■■□□□ 1.03
HOXC11-201ENST00000243082 MAP3K11Q16584 847 aa21.5■■□□□ 1.03
HOXC11-201ENST00000243082 NLGN1Q8N2Q7 840 aa21.5■■□□□ 1.03
HOXC11-201ENST00000243082 FANCBQ8NB91 859 aa21.5■■□□□ 1.03
HOXC11-201ENST00000243082 TBC1D16Q8TBP0 767 aa21.5■■□□□ 1.03
HOXC11-201ENST00000243082 CLSTN2Q9H4D0 955 aa21.5■■□□□ 1.03
HOXC11-201ENST00000243082 MKRN1Q9UHC7 482 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms