RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 MAPKAPK5Q8IW41 473 aa21.36■■□□□ 1.01
CBX1-201ENST00000225603 ZDHHC15Q96MV8 337 aa21.36■■□□□ 1.01
CBX1-201ENST00000225603 LRRC2Q9BYS8 371 aa21.36■■□□□ 1.01
CBX1-201ENST00000225603 USP17L8P0C7I0 530 aa21.35■■□□□ 1.01
CBX1-201ENST00000225603 PLCG2P16885 1265 aa21.35■■□□□ 1.01
CBX1-201ENST00000225603 CHST3Q7LGC8 479 aa21.35■■□□□ 1.01
CBX1-201ENST00000225603 MCM9Q9NXL9 1143 aa21.35■■□□□ 1.01
CBX1-201ENST00000225603 NEDD4P46934 1319 aa21.35■■□□□ 1.01
CBX1-201ENST00000225603 LAMA4Q16363 1823 aa21.35■■□□□ 1.01
CBX1-201ENST00000225603 HDLBPQ00341 1268 aaKnown RBP21.35■■□□□ 1.01
CBX1-201ENST00000225603 SLC4A8Q2Y0W8 1093 aa21.35■■□□□ 1.01
CBX1-201ENST00000225603 DHX32Q7L7V1 743 aaKnown RBP21.35■■□□□ 1.01
CBX1-201ENST00000225603 EXOSC10Q01780 885 aaKnown RBP21.34■■□□□ 1.01
CBX1-201ENST00000225603 CIAPIN1Q6FI81 312 aa21.34■■□□□ 1.01
CBX1-201ENST00000225603 CDC42EP5Q6NZY7 148 aa21.34■■□□□ 1.01
CBX1-201ENST00000225603 CERS3Q8IU89 383 aa21.34■■□□□ 1.01
CBX1-201ENST00000225603 MB21D2Q8IYB1 491 aaPredicted RBP21.34■■□□□ 1.01
CBX1-201ENST00000225603 TMX3Q96JJ7 454 aa21.34■■□□□ 1.01
CBX1-201ENST00000225603 USP40Q9NVE5 1235 aa21.34■■□□□ 1.01
CBX1-201ENST00000225603 ANAPC4Q9UJX5 808 aa21.34■■□□□ 1.01
CBX1-201ENST00000225603 SERPINA10Q9UK55 444 aa21.34■■□□□ 1.01
CBX1-201ENST00000225603 RBM5P52756 815 aaKnown RBP eCLIP21.33■■□□□ 1.01
CBX1-201ENST00000225603 AKNAD1Q5T1N1 836 aa21.33■■□□□ 1.01
CBX1-201ENST00000225603 MYO3BQ8WXR4 1341 aa21.33■■□□□ 1
CBX1-201ENST00000225603 WDHD1O75717 1129 aaPredicted RBP21.33■■□□□ 1
CBX1-201ENST00000225603 ANTXR2P58335 489 aa21.33■■□□□ 1
CBX1-201ENST00000225603 TOB2Q14106 344 aaPredicted RBP21.33■■□□□ 1
CBX1-201ENST00000225603 NCOA7Q8NI08 942 aa21.33■■□□□ 1
CBX1-201ENST00000225603 SAP30BPQ9UHR5 308 aaKnown RBP21.33■■□□□ 1
CBX1-201ENST00000225603 FLT1P17948 1338 aa21.32■■□□□ 1
CBX1-201ENST00000225603 B4E1Z4 1266 aa21.32■■□□□ 1
CBX1-201ENST00000225603 HMGB1P09429 215 aaKnown RBP21.32■■□□□ 1
CBX1-201ENST00000225603 MCM2P49736 904 aa21.32■■□□□ 1
CBX1-201ENST00000225603 STAG1Q8WVM7 1258 aa21.32■■□□□ 1
CBX1-201ENST00000225603 FOXD4L1Q9NU39 408 aa21.32■■□□□ 1
CBX1-201ENST00000225603 CDK5RAP2Q96SN8 1893 aa21.32■■□□□ 1
CBX1-201ENST00000225603 FZD9O00144 591 aa21.32■■□□□ 1
CBX1-201ENST00000225603 RAB3GAP1Q15042 981 aa21.32■■□□□ 1
CBX1-201ENST00000225603 CFAP100Q494V2 611 aa21.32■■□□□ 1
CBX1-201ENST00000225603 SBK1Q52WX2 424 aa21.32■■□□□ 1
CBX1-201ENST00000225603 Q6ZUG5 572 aa21.32■■□□□ 1
CBX1-201ENST00000225603 DDX4Q9NQI0 724 aaKnown RBP21.32■■□□□ 1
CBX1-201ENST00000225603 MFSD6Q6ZSS7 791 aa21.31■■□□□ 1
CBX1-201ENST00000225603 CYB5R4Q7L1T6 521 aa21.31■■□□□ 1
CBX1-201ENST00000225603 IL27Q8NEV9 243 aa21.31■■□□□ 1
CBX1-201ENST00000225603 PRMT6Q96LA8 375 aaPredicted RBP21.31■■□□□ 1
CBX1-201ENST00000225603 ALDH8A1Q9H2A2 487 aaPredicted RBP21.31■■□□□ 1
CBX1-201ENST00000225603 GPHNQ9NQX3 736 aaPredicted RBP21.31■■□□□ 1
CBX1-201ENST00000225603 ARPP21Q9UBL0 812 aaPredicted RBP21.31■■□□□ 1
CBX1-201ENST00000225603 TIAM2Q8IVF5 1701 aa21.31■■□□□ 1
CBX1-201ENST00000225603 SHTN1A0MZ66 631 aa21.31■■□□□ 1
CBX1-201ENST00000225603 LARGE1O95461 756 aa21.31■■□□□ 1
CBX1-201ENST00000225603 PICALMQ13492 652 aa21.31■■□□□ 1
CBX1-201ENST00000225603 C12orf60Q5U649 245 aa21.31■■□□□ 1
CBX1-201ENST00000225603 RALYLQ86SE5 291 aaKnown RBP21.31■■□□□ 1
CBX1-201ENST00000225603 AGBL3Q8NEM8 1001 aa21.31■■□□□ 1
CBX1-201ENST00000225603 LIMCH1Q9UPQ0 1083 aa21.31■■□□□ 1
CBX1-201ENST00000225603 PLCD1P51178 756 aa21.3■■□□□ 1
CBX1-201ENST00000225603 CACNB3P54284 484 aa21.3■■□□□ 1
CBX1-201ENST00000225603 NFIAQ12857 509 aa21.3■■□□□ 1
CBX1-201ENST00000225603 TRDNQ13061 729 aa21.3■■□□□ 1
CBX1-201ENST00000225603 TPCN1Q9ULQ1 816 aa21.3■■□□□ 1
CBX1-201ENST00000225603 RRP12Q5JTH9 1297 aaKnown RBP21.29■■□□□ 1
CBX1-201ENST00000225603 TNPO1Q92973 898 aaKnown RBP21.29■■□□□ 1
CBX1-201ENST00000225603 ZNF541Q9H0D2 1346 aa21.29■■□□□ 1
CBX1-201ENST00000225603 PRC1O43663 620 aa21.29■■□□□ 1
CBX1-201ENST00000225603 LMNB1P20700 586 aa21.29■■□□□ 1
CBX1-201ENST00000225603 MCM5P33992 734 aa21.29■■□□□ 1
CBX1-201ENST00000225603 TNIP1Q15025 636 aa21.29■■□□□ 1
CBX1-201ENST00000225603 DDX11L8A8MPP1 907 aa21.28■■□□□ 1
CBX1-201ENST00000225603 KDM4AO75164 1064 aa21.28■■□□□ 1
CBX1-201ENST00000225603 PRDM1O75626 825 aa21.28■■□□□ 1
CBX1-201ENST00000225603 DYNLL2Q96FJ2 89 aa21.28■■□□□ 1
CBX1-201ENST00000225603 TDRD3Q9H7E2 651 aaKnown RBP21.28■■□□□ 1
CBX1-201ENST00000225603 TOMM22Q9NS69 142 aa21.28■■□□□ 1
CBX1-201ENST00000225603 ZSWIM5Q9P217 1185 aa21.28■■□□□ 1
CBX1-201ENST00000225603 SOCS7O14512 581 aa21.28■■□□□ 1
CBX1-201ENST00000225603 FGRP09769 529 aa21.28■■□□□ 1
CBX1-201ENST00000225603 EIF6P56537 245 aaKnown RBP21.28■■□□□ 1
CBX1-201ENST00000225603 BRF1Q92994 677 aa21.28■■□□□ 1
CBX1-201ENST00000225603 NAV1Q8NEY1 1877 aa21.28■■□□□ 1
CBX1-201ENST00000225603 POLR3DP05423 398 aaPredicted RBP21.27■■□□□ 1
CBX1-201ENST00000225603 ME3Q16798 604 aa21.27■■□□□ 1
CBX1-201ENST00000225603 ZFPM1Q8IX07 1006 aa21.27■■□□□ 1
CBX1-201ENST00000225603 OGFOD1Q8N543 542 aa21.27■■□□□ 1
CBX1-201ENST00000225603 AGXT2Q9BYV1 514 aa21.27■■□□□ 1
CBX1-201ENST00000225603 RNF41Q9H4P4 317 aaPredicted RBP21.27■■□□□ 1
CBX1-201ENST00000225603 HDAC9Q9UKV0 1011 aa21.27■■□□□ 1
CBX1-201ENST00000225603 GJA3Q9Y6H8 435 aa21.27■■□□□ 1
CBX1-201ENST00000225603 KRT23Q9C075 422 aa21.27■□□□□ 0.99
CBX1-201ENST00000225603 CNNM2Q9H8M5 875 aa21.27■□□□□ 0.99
CBX1-201ENST00000225603 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.27■□□□□ 0.99
CBX1-201ENST00000225603 DDX60LQ5H9U9 1706 aaKnown RBP21.26■□□□□ 0.99
CBX1-201ENST00000225603 SPDYE2BA6NHP3 402 aa21.26■□□□□ 0.99
CBX1-201ENST00000225603 SPDYE6P0CI01 402 aa21.26■□□□□ 0.99
CBX1-201ENST00000225603 FGD1P98174 961 aa21.26■□□□□ 0.99
CBX1-201ENST00000225603 ANKRD1Q15327 319 aa21.26■□□□□ 0.99
CBX1-201ENST00000225603 LAMB1P07942 1786 aa21.26■□□□□ 0.99
CBX1-201ENST00000225603 FOCADQ5VW36 1801 aa21.25■□□□□ 0.99
CBX1-201ENST00000225603 CUL4AQ13619 759 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms