RNA–Protein interactions for RNA: ENST00000216044.9

GTPBP1-201, Transcript of GTP binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTPBP1, Length 5,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP1-201ENST00000216044 PICALMQ13492 652 aa16.65■□□□□ 0.26
GTPBP1-201ENST00000216044 TBC1D9BQ66K14 1250 aa16.65■□□□□ 0.26
GTPBP1-201ENST00000216044 IFIT1BQ5T764 474 aaKnown RBP16.65■□□□□ 0.26
GTPBP1-201ENST00000216044 MYO1BO43795 1136 aa16.64■□□□□ 0.25
GTPBP1-201ENST00000216044 PTH1RQ03431 593 aa16.64■□□□□ 0.25
GTPBP1-201ENST00000216044 FAM177A1Q8N128 213 aaPredicted RBP16.64■□□□□ 0.25
GTPBP1-201ENST00000216044 LINC00116Q8NCU8 138 aa16.64■□□□□ 0.25
GTPBP1-201ENST00000216044 PYM1Q9BRP8 204 aaKnown RBP16.64■□□□□ 0.25
GTPBP1-201ENST00000216044 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.64■□□□□ 0.25
GTPBP1-201ENST00000216044 V9GYY5 206 aaPredicted RBP16.64■□□□□ 0.25
GTPBP1-201ENST00000216044 PDE6AP16499 860 aa16.64■□□□□ 0.25
GTPBP1-201ENST00000216044 FERP16591 822 aa16.64■□□□□ 0.25
GTPBP1-201ENST00000216044 C2CD5Q86YS7 1000 aa16.64■□□□□ 0.25
GTPBP1-201ENST00000216044 WWC3Q9ULE0 1092 aa16.64■□□□□ 0.25
GTPBP1-201ENST00000216044 XDHP47989 1333 aa16.64■□□□□ 0.25
GTPBP1-201ENST00000216044 APOBRQ0VD83 1088 aa16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 CETN1Q12798 172 aa16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 TXNRD1Q16881 649 aa16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 SEC62Q99442 399 aaKnown RBP16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 PLA2G12BQ9BX93 195 aa16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 UTYO14607 1347 aa16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 TBC1D22AQ8WUA7 517 aa16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 BBXQ8WY36 941 aaPredicted RBP16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 JDP2Q8WYK2 163 aa16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 BSDC1Q9NW68 430 aaPredicted RBP16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 STX8Q9UNK0 236 aa16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 ZSCAN22P10073 491 aaPredicted RBP16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 ZNF34Q8IZ26 560 aa16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 TM6SF1Q9BZW5 370 aa16.63■□□□□ 0.25
GTPBP1-201ENST00000216044 CAMTA2O94983 1202 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 BAG4O95429 457 aaKnown RBP16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 CACNA2D4Q7Z3S7 1137 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 CERS3Q8IU89 383 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 SUPT20HQ8NEM7 779 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 EHMT1Q9H9B1 1298 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 PPFIA3O75145 1194 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 SLC26A6Q9BXS9 759 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 LTN1O94822 1766 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 BBOX1O75936 387 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 TMC4Q7Z404 712 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 TEX11Q8IYF3 940 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 AATFQ9NY61 560 aaKnown RBP eCLIP16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 MAST3O60307 1309 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 CASQ1P31415 396 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 RTN1Q16799 776 aa16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 LSG1Q9H089 658 aaKnown RBP16.62■□□□□ 0.25
GTPBP1-201ENST00000216044 CARMIL3Q8ND23 1372 aa16.61■□□□□ 0.25
GTPBP1-201ENST00000216044 UBE3CQ15386 1083 aa16.61■□□□□ 0.25
GTPBP1-201ENST00000216044 CCDC96Q2M329 555 aa16.61■□□□□ 0.25
GTPBP1-201ENST00000216044 SREK1Q8WXA9 508 aaKnown RBP16.61■□□□□ 0.25
GTPBP1-201ENST00000216044 ALS2CR12Q96Q35 445 aa16.61■□□□□ 0.25
GTPBP1-201ENST00000216044 SEMA3EO15041 775 aa16.61■□□□□ 0.25
GTPBP1-201ENST00000216044 PABPN1LA6NDY0 278 aaKnown RBP16.61■□□□□ 0.25
GTPBP1-201ENST00000216044 GSDMDP57764 484 aa16.61■□□□□ 0.25
GTPBP1-201ENST00000216044 YEATS4O95619 227 aa16.61■□□□□ 0.25
GTPBP1-201ENST00000216044 KIF4BQ2VIQ3 1234 aa16.61■□□□□ 0.25
GTPBP1-201ENST00000216044 ZMYM1Q5SVZ6 1142 aa16.61■□□□□ 0.25
GTPBP1-201ENST00000216044 CABP5Q9NP86 173 aa16.61■□□□□ 0.25
GTPBP1-201ENST00000216044 CNTNAP4Q9C0A0 1308 aa16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 FSD2A1L4K1 749 aa16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 GRAPQ13588 217 aa16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 GRAPLQ8TC17 118 aaPredicted RBP16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 TSNARE1Q96NA8 513 aa16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 CCDC113Q9H0I3 377 aa16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 BCL9O00512 1426 aa16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 HSPD1P10809 573 aaKnown RBP16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 CNKSR1Q969H4 720 aa16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 PALD1Q9ULE6 856 aa16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 PPEF1O14829 653 aaPredicted RBP16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 LRRC45Q96CN5 670 aa16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 B4E1Z4 1266 aa16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 TMEM266Q2M3C6 531 aa16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 ANTXR1Q9H6X2 564 aa16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 RTL9Q8NET4 1388 aa16.6■□□□□ 0.25
GTPBP1-201ENST00000216044 FNBP4Q8N3X1 1017 aaPredicted RBP16.59■□□□□ 0.25
GTPBP1-201ENST00000216044 ZSCAN16Q9H4T2 348 aaPredicted RBP16.59■□□□□ 0.25
GTPBP1-201ENST00000216044 CAVIN2O95810 425 aa16.59■□□□□ 0.25
GTPBP1-201ENST00000216044 MAP4K1Q92918 833 aa16.59■□□□□ 0.25
GTPBP1-201ENST00000216044 STXBP4Q6ZWJ1 553 aa16.59■□□□□ 0.25
GTPBP1-201ENST00000216044 TMEM87BQ96K49 555 aa16.59■□□□□ 0.25
GTPBP1-201ENST00000216044 EHBP1Q8NDI1 1231 aa16.59■□□□□ 0.25
GTPBP1-201ENST00000216044 CALM1P0DP23 149 aa16.58■□□□□ 0.25
GTPBP1-201ENST00000216044 CALM2P0DP24 149 aa16.58■□□□□ 0.25
GTPBP1-201ENST00000216044 CALM3P0DP25 149 aa16.58■□□□□ 0.25
GTPBP1-201ENST00000216044 PPP4R3BQ5MIZ7 849 aa16.58■□□□□ 0.25
GTPBP1-201ENST00000216044 INTS5Q6P9B9 1019 aaKnown RBP16.58■□□□□ 0.25
GTPBP1-201ENST00000216044 TOP1P11387 765 aaKnown RBP16.58■□□□□ 0.24
GTPBP1-201ENST00000216044 TTC6Q86TZ1 520 aa16.58■□□□□ 0.24
GTPBP1-201ENST00000216044 DDX23Q9BUQ8 820 aaKnown RBP16.58■□□□□ 0.24
GTPBP1-201ENST00000216044 ZMYND15Q9H091 742 aa16.58■□□□□ 0.24
GTPBP1-201ENST00000216044 E7EWF7 191 aa16.58■□□□□ 0.24
GTPBP1-201ENST00000216044 NLRP5P59047 1200 aa16.58■□□□□ 0.24
GTPBP1-201ENST00000216044 IFI16Q16666 785 aaKnown RBP16.58■□□□□ 0.24
GTPBP1-201ENST00000216044 MFSD14BQ5SR56 506 aa16.58■□□□□ 0.24
GTPBP1-201ENST00000216044 MMP10P09238 476 aa16.58■□□□□ 0.24
GTPBP1-201ENST00000216044 RAB3GAP1Q15042 981 aa16.58■□□□□ 0.24
GTPBP1-201ENST00000216044 SPECC1Q5M775 1068 aa16.58■□□□□ 0.24
GTPBP1-201ENST00000216044 PI16Q6UXB8 463 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms