RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 TSGA10IPQ3SY00 556 aa19.7■□□□□ 0.74
POLR2E-201ENST00000215587 MTMR14Q8NCE2 650 aa19.7■□□□□ 0.74
POLR2E-201ENST00000215587 SMC1BQ8NDV3 1235 aa19.7■□□□□ 0.74
POLR2E-201ENST00000215587 KIF2CQ99661 725 aa19.7■□□□□ 0.74
POLR2E-201ENST00000215587 TMOD2Q9NZR1 351 aa19.7■□□□□ 0.74
POLR2E-201ENST00000215587 ARPP21Q9UBL0 812 aaPredicted RBP19.7■□□□□ 0.74
POLR2E-201ENST00000215587 ZC3H4Q9UPT8 1303 aaKnown RBP19.7■□□□□ 0.74
POLR2E-201ENST00000215587 MAPKAPK5Q8IW41 473 aa19.69■□□□□ 0.74
POLR2E-201ENST00000215587 MICALL2Q8IY33 904 aa19.69■□□□□ 0.74
POLR2E-201ENST00000215587 JAKMIP1Q96N16 626 aaKnown RBP19.69■□□□□ 0.74
POLR2E-201ENST00000215587 MYOZ2Q9NPC6 264 aa19.69■□□□□ 0.74
POLR2E-201ENST00000215587 MCM9Q9NXL9 1143 aa19.69■□□□□ 0.74
POLR2E-201ENST00000215587 FLT1P17948 1338 aa19.69■□□□□ 0.74
POLR2E-201ENST00000215587 USP17L12C9JPN9 530 aa19.68■□□□□ 0.74
POLR2E-201ENST00000215587 USP17L21D6R901 530 aa19.68■□□□□ 0.74
POLR2E-201ENST00000215587 MYO1BO43795 1136 aa19.68■□□□□ 0.74
POLR2E-201ENST00000215587 SBK1Q52WX2 424 aa19.68■□□□□ 0.74
POLR2E-201ENST00000215587 CTR9Q6PD62 1173 aa19.68■□□□□ 0.74
POLR2E-201ENST00000215587 TM6SF1Q9BZW5 370 aa19.68■□□□□ 0.74
POLR2E-201ENST00000215587 CNOT7Q9UIV1 285 aaKnown RBP19.68■□□□□ 0.74
POLR2E-201ENST00000215587 PCDHAC2Q9Y5I4 1007 aa19.68■□□□□ 0.74
POLR2E-201ENST00000215587 LAMA4Q16363 1823 aa19.67■□□□□ 0.74
POLR2E-201ENST00000215587 MINDY4BA8MYZ0 360 aa19.67■□□□□ 0.74
POLR2E-201ENST00000215587 H7C1D1 291 aa19.67■□□□□ 0.74
POLR2E-201ENST00000215587 WDHD1O75717 1129 aaPredicted RBP19.67■□□□□ 0.74
POLR2E-201ENST00000215587 PPARAQ07869 468 aa19.67■□□□□ 0.74
POLR2E-201ENST00000215587 PICALMQ13492 652 aa19.67■□□□□ 0.74
POLR2E-201ENST00000215587 DPY19L2Q6NUT2 758 aa19.67■□□□□ 0.74
POLR2E-201ENST00000215587 IL27Q8NEV9 243 aa19.67■□□□□ 0.74
POLR2E-201ENST00000215587 PRMT6Q96LA8 375 aaPredicted RBP19.67■□□□□ 0.74
POLR2E-201ENST00000215587 TDRD3Q9H7E2 651 aaKnown RBP19.67■□□□□ 0.74
POLR2E-201ENST00000215587 MKRN1Q9UHC7 482 aaKnown RBP19.67■□□□□ 0.74
POLR2E-201ENST00000215587 ANAPC4Q9UJX5 808 aa19.67■□□□□ 0.74
POLR2E-201ENST00000215587 TAF6LQ9Y6J9 622 aa19.67■□□□□ 0.74
POLR2E-201ENST00000215587 NAV1Q8NEY1 1877 aa19.67■□□□□ 0.74
POLR2E-201ENST00000215587 E7EWF7 191 aa19.66■□□□□ 0.74
POLR2E-201ENST00000215587 POLR3DP05423 398 aaPredicted RBP19.66■□□□□ 0.74
POLR2E-201ENST00000215587 SLC3A2P08195 630 aaKnown RBP19.66■□□□□ 0.74
POLR2E-201ENST00000215587 CASTP20810 708 aaKnown RBP19.66■□□□□ 0.74
POLR2E-201ENST00000215587 ADCK5Q3MIX3 580 aa19.66■□□□□ 0.74
POLR2E-201ENST00000215587 IDI2Q9BXS1 227 aa19.66■□□□□ 0.74
POLR2E-201ENST00000215587 RNF41Q9H4P4 317 aaPredicted RBP19.66■□□□□ 0.74
POLR2E-201ENST00000215587 RRAGCQ9HB90 399 aa19.66■□□□□ 0.74
POLR2E-201ENST00000215587 GPRC5DQ9NZD1 345 aa19.66■□□□□ 0.74
POLR2E-201ENST00000215587 SAP30BPQ9UHR5 308 aaKnown RBP19.66■□□□□ 0.74
POLR2E-201ENST00000215587 CYP46A1Q9Y6A2 500 aa19.66■□□□□ 0.74
POLR2E-201ENST00000215587 ST18O60284 1047 aa19.65■□□□□ 0.74
POLR2E-201ENST00000215587 DDNO94850 711 aaPredicted RBP19.65■□□□□ 0.74
POLR2E-201ENST00000215587 HMGB1P09429 215 aaKnown RBP19.65■□□□□ 0.74
POLR2E-201ENST00000215587 LMOD1P29536 600 aaPredicted RBP19.65■□□□□ 0.74
POLR2E-201ENST00000215587 CTDSPL2Q05D32 466 aa19.65■□□□□ 0.74
POLR2E-201ENST00000215587 TRDNQ13061 729 aa19.65■□□□□ 0.74
POLR2E-201ENST00000215587 BLOC1S2Q6QNY1 142 aa19.65■□□□□ 0.74
POLR2E-201ENST00000215587 RALYLQ86SE5 291 aaKnown RBP19.65■□□□□ 0.74
POLR2E-201ENST00000215587 TBC1D10CQ8IV04 446 aa19.65■□□□□ 0.74
POLR2E-201ENST00000215587 ZBED3Q96IU2 234 aaPredicted RBP19.65■□□□□ 0.74
POLR2E-201ENST00000215587 NEK1Q96PY6 1258 aa19.65■□□□□ 0.74
POLR2E-201ENST00000215587 ZNF70Q9UC06 446 aaPredicted RBP19.65■□□□□ 0.74
POLR2E-201ENST00000215587 SHTN1A0MZ66 631 aa19.64■□□□□ 0.73
POLR2E-201ENST00000215587 NPM3O75607 178 aaKnown RBP19.64■□□□□ 0.73
POLR2E-201ENST00000215587 NEK4P51957 841 aa19.64■□□□□ 0.73
POLR2E-201ENST00000215587 KIF4BQ2VIQ3 1234 aa19.64■□□□□ 0.73
POLR2E-201ENST00000215587 SPDYE2Q495Y8 402 aa19.64■□□□□ 0.73
POLR2E-201ENST00000215587 AKNAD1Q5T1N1 836 aa19.64■□□□□ 0.73
POLR2E-201ENST00000215587 RBM26Q5T8P6 1007 aaKnown RBP19.64■□□□□ 0.73
POLR2E-201ENST00000215587 STOX1Q6ZVD7 989 aa19.64■□□□□ 0.73
POLR2E-201ENST00000215587 STAG1Q8WVM7 1258 aa19.64■□□□□ 0.73
POLR2E-201ENST00000215587 UPF3BQ9BZI7 483 aaKnown RBP19.64■□□□□ 0.73
POLR2E-201ENST00000215587 NBPF3Q9H094 633 aa19.64■□□□□ 0.73
POLR2E-201ENST00000215587 OSBPL5Q9H0X9 879 aaPredicted RBP19.64■□□□□ 0.73
POLR2E-201ENST00000215587 CNNM2Q9H8M5 875 aa19.64■□□□□ 0.73
POLR2E-201ENST00000215587 ZSWIM6Q9HCJ5 1215 aa19.64■□□□□ 0.73
POLR2E-201ENST00000215587 DDX4Q9NQI0 724 aaKnown RBP19.64■□□□□ 0.73
POLR2E-201ENST00000215587 LAMB1P07942 1786 aa19.64■□□□□ 0.73
POLR2E-201ENST00000215587 FOCADQ5VW36 1801 aa19.64■□□□□ 0.73
POLR2E-201ENST00000215587 ECM29Q5VYK3 1845 aa19.64■□□□□ 0.73
POLR2E-201ENST00000215587 CDK5RAP2Q96SN8 1893 aa19.63■□□□□ 0.73
POLR2E-201ENST00000215587 DDX60LQ5H9U9 1706 aaKnown RBP19.63■□□□□ 0.73
POLR2E-201ENST00000215587 CYP2D7A0A087X1C5 515 aa19.63■□□□□ 0.73
POLR2E-201ENST00000215587 CLRN2A0PK11 232 aa19.63■□□□□ 0.73
POLR2E-201ENST00000215587 WNT10BO00744 389 aa19.63■□□□□ 0.73
POLR2E-201ENST00000215587 ENTPD3O75355 529 aa19.63■□□□□ 0.73
POLR2E-201ENST00000215587 CYP2D6P10635 497 aa19.63■□□□□ 0.73
POLR2E-201ENST00000215587 CACNB3P54284 484 aa19.63■□□□□ 0.73
POLR2E-201ENST00000215587 NFIAQ12857 509 aa19.63■□□□□ 0.73
POLR2E-201ENST00000215587 TBC1D10BQ4KMP7 808 aaPredicted RBP19.63■□□□□ 0.73
POLR2E-201ENST00000215587 C12orf60Q5U649 245 aa19.63■□□□□ 0.73
POLR2E-201ENST00000215587 MFSD6Q6ZSS7 791 aa19.63■□□□□ 0.73
POLR2E-201ENST00000215587 TTC6Q86TZ1 520 aa19.63■□□□□ 0.73
POLR2E-201ENST00000215587 NCOA7Q8NI08 942 aa19.63■□□□□ 0.73
POLR2E-201ENST00000215587 BAZ2AQ9UIF9 1905 aaKnown RBP19.63■□□□□ 0.73
POLR2E-201ENST00000215587 ROBO3Q96MS0 1386 aa19.62■□□□□ 0.73
POLR2E-201ENST00000215587 HLA-DOAP06340 250 aa19.62■□□□□ 0.73
POLR2E-201ENST00000215587 PCP11498 1178 aaKnown RBP19.62■□□□□ 0.73
POLR2E-201ENST00000215587 FKBP1CQ5VVH2 108 aa19.62■□□□□ 0.73
POLR2E-201ENST00000215587 RUFY3Q7L099 469 aa19.62■□□□□ 0.73
POLR2E-201ENST00000215587 KRT23Q9C075 422 aa19.62■□□□□ 0.73
POLR2E-201ENST00000215587 VEZTQ9HBM0 779 aa19.62■□□□□ 0.73
POLR2E-201ENST00000215587 TOMM22Q9NS69 142 aa19.62■□□□□ 0.73
POLR2E-201ENST00000215587 FAM198AQ9UFP1 575 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms