RNA–Protein interactions for RNA: ENSMUST00000088653.2

Ccdc87-201, Transcript of Coiled-coil domain-containing protein 87, mousemouse

APPRIS P1 BASIC

Gene Ccdc87, Length 3,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87-201ENSMUST00000088653 Ankrd13dQ6PD24 605 aa12□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Fnbp4Q6ZQ03 1031 aa12□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Strip1Q8C079 837 aa12□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Pcdhb15Q91Y04 786 aa12□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Dusp10Q9ESS0 483 aa12□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Brpf3B2KF05 1204 aaKnown RBP11.99□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 EzrP26040 586 aaKnown RBP11.99□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Dnm1P39053 867 aa11.99□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Bach1P97302 739 aa11.99□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Plcd3Q8K2J0 785 aa11.99□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Ipo4Q8VI75 1082 aa11.99□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Mmel1Q9JLI3 765 aa11.99□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Mx2Q9WVP9 655 aa11.99□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Pank2Q3U4S0 443 aa11.99□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Spg7Q3ULF4 781 aa11.99□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Polr3gQ6NXY9 223 aa11.99□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 NenfQ9CQ45 171 aa11.99□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Mei1Q9D4I2 1268 aa11.99□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Znf638Q61464 1960 aaKnown RBP11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Gm43638A0A0J9YU36 694 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Dnajc2P54103 621 aaKnown RBP11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Rrp12Q6P5B0 1295 aaKnown RBP11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Cypt2Q6P924 180 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 CrebrfQ8CDG5 640 aaKnown RBP11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Evc2Q8K1G2 1220 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 NsmfQ99NF2 532 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Col20a1Q923P0 1320 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Lamb1P02469 1786 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Prss40A6H6T1 365 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Cplx1P63040 134 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Bend4P86174 541 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Hvcn1Q3U2S8 269 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Tmed8Q3UHI4 326 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Ppp2r5bQ6PD28 497 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Glis3Q6XP49 780 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Stx1aO35526 288 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Gas1Q01721 343 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Mindy4Q3UQI9 744 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Pdcl3Q8BVF2 240 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 CerkQ8K4Q7 531 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Hps3Q91VB4 1002 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Mrpl12Q9DB15 201 aaKnown RBP11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Hmgn5Q9JL35 406 aa11.98□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Tbc1d8bA3KGB4 1114 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Cspp1B2RX88 1205 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 NfixP70257 488 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Kif22Q3V300 660 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Adck5Q80V03 582 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 QarsQ8BML9 775 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Pus7lQ8CE46 702 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Ush1cQ9ES64 910 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Nup188Q6ZQH8 1759 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Slurp2P0DP59 97 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Psd3Q2PFD7 1037 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Ccdc51Q3URS9 406 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Cdcp1Q5U462 833 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 IqcgQ80W32 419 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Tbc1d5Q80XQ2 815 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Q8K2W9 541 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Rbm5Q91YE7 815 aaKnown RBP11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Nop2Q922K7 793 aaKnown RBP11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 RarsQ9D0I9 660 aaKnown RBP11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Epb41l3Q9WV92 929 aa11.97□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Pet2A2AHY8 747 aa11.96□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Ces1hD3Z298 562 aa11.96□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 PrkcshO08795 521 aa11.96□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Ttll4Q80UG8 1193 aa11.96□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Tsen34Q8BMZ5 316 aa11.96□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Stk39Q9Z1W9 556 aa11.96□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Togaram1Q6A070 1776 aaKnown RBP11.96□□□□□ -0.49
Ccdc87-201ENSMUST00000088653 Becn1O88597 448 aa11.96□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Abl1P00520 1123 aa11.96□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Tbc1d31Q6NXY1 996 aa11.96□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Fchsd1Q6PFY1 688 aa11.96□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Kif1bpQ6ZPU9 617 aa11.96□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Pnma3Q8JZW8 466 aa11.96□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Hnrnpul1Q8VDM6 859 aaKnown RBP11.96□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Hmgb2P30681 210 aaKnown RBP11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Ell2Q3UKU1 639 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Oxsr1Q6P9R2 527 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Pcdhb14Q6PB90 796 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Tmem179Q8BHH9 233 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 St5Q924W7 1134 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Akt1s1Q9D1F4 257 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 UvssaQ9D479 717 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Ccdc39Q9D5Y1 937 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Eif4enif1Q9EST3 983 aaKnown RBP11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Rbm6S4R1W5 1118 aaKnown RBP11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Pfkfb1P70266 471 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Mum1l1Q4VA55 681 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Acot9Q9R0X4 439 aaKnown RBP11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Prr16A3KMN5 304 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Gm3893E9Q1I1 302 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Peak1Q69Z38 1735 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Cep89Q9CZX2 791 aa11.95□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Tsc2Q61037 1814 aa11.94□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Ampd3O08739 766 aa11.94□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Calm1P0DP26 149 aaKnown RBP11.94□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Calm2P0DP27 149 aaKnown RBP11.94□□□□□ -0.5
Ccdc87-201ENSMUST00000088653 Calm3P0DP28 149 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms