RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Ankrd40Q5SUE8 363 aa11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 SympkQ80X82 1284 aa11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ccdc124Q9D8X2 217 aaKnown RBP11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Nucks1Q80XU3 234 aaKnown RBP11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Zfp202Q8C879 641 aa11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Pdcd6ipQ9WU78 869 aaKnown RBP11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Fchsd1Q6PFY1 688 aa11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Cnksr1A2A9K7 700 aa11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Mindy4Q3UQI9 744 aa11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Bloc1s4Q8VED2 215 aa11.65□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Diaph2O70566 1098 aa11.65□□□□□ -0.55
Scn8a-201ENSMUST00000082209 IqcdQ9D3V1 458 aa11.65□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Rexo1Q7TT28 1213 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Tpcn2Q8BWC0 731 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Klhl40Q9D783 621 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Nlrp1aQ2LKU9 1182 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Taf4bG5E8Z2 855 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Trove2O08848 538 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Ccdc110Q3V125 848 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Naa16Q9DBB4 864 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Riok3Q9DBU3 519 aaKnown RBP11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Q8BZJ8 459 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Znf830Q8R1N0 363 aaKnown RBP11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 S100bP50114 92 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Ccnl1Q52KE7 532 aaKnown RBP11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Kiaa1328Q6NZK5 612 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Krt90E9Q1Z0 538 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Nlrp2Q4PLS0 1046 aaKnown RBP11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Actr5Q80US4 605 aaKnown RBP11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Krt222Q8CCX5 294 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Adgrl3Q80TS3 1537 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Snx25Q3ZT31 840 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Gtpbp10Q8K013 366 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Acsbg1Q99PU5 721 aa11.64□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Ulk4Q3V129 1303 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Ankrd13dQ6PD24 605 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Serpina10Q8R121 448 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Pcdhb2Q91Y00 799 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Ndufab1Q9CR21 156 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Parp14Q2EMV9 1817 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 NpatQ8BMA5 1420 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Pnpla2Q8BJ56 486 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 PpanQ91YU8 470 aaKnown RBP11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Plekhg2Q6KAU7 1340 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Gm32742A0A1B0GT42 1604 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Cyp27a1Q9DBG1 533 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Mdm2P23804 489 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 AlkP97793 1621 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Yeats2Q3TUF7 1407 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Synj2Q9D2G5 1434 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Myo5cE9Q1F5 1742 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Snd1Q78PY7 910 aaKnown RBP11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Azi2Q9QYP6 405 aa11.63□□□□□ -0.55
Scn8a-201ENSMUST00000082209 YwhaeP62259 255 aaKnown RBP11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Tshz3Q8CGV9 1081 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Csrnp2Q8BGQ2 534 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Vps52Q8C754 723 aaKnown RBP11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Cetn3O35648 167 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Asic2Q925H0 512 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Gjc1P28229 396 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Fam83gQ5SWY7 812 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Bzw2Q91VK1 419 aaKnown RBP11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Nedd9O35177 833 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Gm5168Q4KL04 211 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Sept11Q8C1B7 431 aaKnown RBP11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Cd2bp2Q9CWK3 342 aaKnown RBP11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Cdk5rap2Q8K389 1822 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 PhbP67778 272 aaKnown RBP11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Nsrp1Q5NCR9 542 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Magi3Q9EQJ9 1476 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Ccdc7Q9D541 371 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Atp12aQ9Z1W8 1035 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Polr2dQ9D7M8 142 aaKnown RBP11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Npc1l1Q6T3U4 1333 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Mcm10Q0VBD2 885 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Ccdc125Q5U465 500 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 NapaQ9DB05 295 aa11.62□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Mx1P09922 631 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Luc7l3Q5SUF2 432 aaKnown RBP11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Cct6bQ61390 531 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Klhdc4Q921I2 584 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Psma7Q9Z2U0 248 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Iqgap1Q9JKF1 1657 aaKnown RBP11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Myo1aO88329 1043 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Parp1P11103 1013 aaKnown RBP11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Ubac1Q8VDI7 409 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 GnpatP98192 678 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Gm5169Q5M8P2 212 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Krit1Q6S5J6 736 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Usp11Q99K46 921 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Pdzd4Q9QY39 772 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Wdr17E9Q271 1322 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Pla2g4eQ50L42 875 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Ufl1Q8CCJ3 793 aaKnown RBP11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Ssfa2Q922B9 1252 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 ArsiQ32KI9 573 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Cdc42bpbQ7TT50 1713 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Armc3A2AU72 881 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Calr3Q9D9Q6 380 aa11.61□□□□□ -0.55
Scn8a-201ENSMUST00000082209 Tom1O88746 492 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 66.3 ms