RNA–Protein interactions for RNA: ENSMUST00000040089.4

Rnf43-201, Transcript of E3 ubiquitin-protein ligase RNF43, mousemouse

TSL 1 (best) BASIC

Gene Rnf43, Length 3,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43-201ENSMUST00000040089 Cep120Q7TSG1 988 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Spire2Q8K1S6 718 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ccdc7Q9D541 371 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ifi35Q9D8C4 286 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 SelenooQ9DBC0 667 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Mst1rQ62190 1378 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Myo1bP46735 1107 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Mtx1P47802 317 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Traf3ip1Q149C2 625 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Cnnm2Q3TWN3 875 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ubac1Q8VDI7 409 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 StrbpQ91WM1 672 aaKnown RBP10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Setdb1O88974 1307 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Lipo1J3QME6 396 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Gnat2P50149 354 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ces1dQ8VCT4 565 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Sept12Q9D451 317 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ube3bQ9ES34 1070 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Prpf38aQ4FK66 312 aaKnown RBP10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Tom1l2Q5SRX1 507 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Scaf8Q6DID3 1268 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Fam196bQ6GQV1 535 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Nxf7Q80SZ6 620 aaKnown RBP10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 KhnynQ80U38 671 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ranbp6Q8BIV3 1105 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Mb21d2Q8C525 428 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ttc27Q8CD92 847 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Add3Q9QYB5 706 aaKnown RBP10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Zfp804bA0A0G2JGH6 1343 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Slit1Q80TR4 1531 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ms4a1P19437 291 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Oxr1Q4KMM3 866 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Rtn1Q8K0T0 780 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Myoz2Q9JJW5 264 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 MetP16056 1379 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 NalcnQ8BXR5 1738 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ubr1O70481 1757 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Trap1aP19473 224 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Msh6P54276 1358 aaKnown RBP10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Pramel6Q810Y9 485 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 SdsQ8VBT2 327 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Hdac9Q99N13 588 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 2310002L09RikQ9D7L5 217 aa10.62□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Kif1aP33173 1695 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ccdc102aQ3TMW1 549 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 L1td1Q587J6 782 aaKnown RBP10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ces3aQ63880 571 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Arid5bQ8BM75 1188 aaKnown RBP10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Kcnj14Q8JZN3 434 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ces3bQ8VCU1 571 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Terf2ipQ91VL8 393 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Eaf2Q91ZD6 262 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Dynll2Q9D0M5 89 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Eid1Q9DCR4 169 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Spata31d1bE9QA57 1361 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Il7P10168 154 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ankrd40Q5SUE8 363 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 March6Q6ZQ89 909 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Vps18Q8R307 973 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Plcd1Q8R3B1 756 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 BrapQ99MP8 591 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ccdc96Q9CR92 584 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Sipa1l1Q8C0T5 1782 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Stx1aO35526 288 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Pde11aP0C1Q2 933 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Bag1Q60739 355 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 HelbQ6NVF4 1074 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Wasf1Q8R5H6 559 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Pik3c2aQ61194 1686 aa10.61□□□□□ -0.71
Rnf43-201ENSMUST00000040089 DccP70211 1447 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Npc1l1Q6T3U4 1333 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Cyp26c1B2RXA7 518 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Akr1c19G3X9Y6 323 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 1700013D24RikQ0P521 120 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 PsdQ5DTT2 1024 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Secisbp2lQ6A098 1086 aaKnown RBP10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Otop3Q80UF9 577 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Sept14Q9DA97 430 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Tfcp2Q9ERA0 502 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Suclg2Q9Z2I8 433 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ano10Q8BH79 659 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Pde3aQ9Z0X4 1141 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Zfp597E9Q6S0 419 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Irx2P81066 474 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ttll12Q3UDE2 639 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ddx31Q6NZQ2 687 aaKnown RBP10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Tbc1d5Q80XQ2 815 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Tmco3Q8BH01 678 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Mtmr3Q8K296 1196 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Pcdhb22Q91XZ8 794 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Pcdhb15Q91Y04 786 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Znf287Q9EQB9 759 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Hip1rQ9JKY5 1068 aa10.6□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Tbc1d30Q69ZT9 766 aa10.59□□□□□ -0.71
Rnf43-201ENSMUST00000040089 PicalmQ7M6Y3 660 aaKnown RBP10.59□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Snw1Q9CSN1 536 aaKnown RBP10.59□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Acot9Q9R0X4 439 aaKnown RBP10.59□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Klhl34A2AI76 644 aa10.59□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Cyp26a1O55127 497 aa10.59□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ms4a2P20490 235 aa10.59□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 87.1 ms