RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Atp12aQ9Z1W8 1035 aa11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Usp42B2RQC2 1324 aaKnown RBP11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Rims2Q9EQZ7 1530 aa11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Mdm2P23804 489 aa11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Bpifb6Q8BU51 449 aa11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Gigyf1Q99MR1 1044 aaKnown RBP11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Plekho1Q9JIY0 408 aa11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Shank2Q80Z38 1476 aa11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Sycp2lA0A0M3U1B0 842 aa11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Gm21671G3UY31 267 aa11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Nkx2-5P42582 318 aa11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Eif5P59325 429 aaKnown RBP11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Naa35Q6PHQ8 725 aa11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Znf526Q8BI66 675 aa11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Kif2bQ8C0N1 668 aa11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Leng8Q8CBY3 785 aaKnown RBP11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 StrbpQ91WM1 672 aaKnown RBP11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Kank3Q9Z1P7 791 aa11.35□□□□□ -0.59
Copb1-201ENSMUST00000033012 Pde4bB1AWC9 736 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 LyarQ08288 388 aaKnown RBP11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Naa25Q8BWZ3 972 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Aipl1Q924K1 328 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Ercc6l2Q9JIM3 1537 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Tmem94Q7TSH8 1360 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Gm10471E9Q1C7 252 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Gm5624F6ZZG8 207 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Tlr7P58681 1050 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Sem1P60897 70 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Tbc1d1Q60949 1255 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Nxf7Q80SZ6 620 aaKnown RBP11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Fnbp1Q80TY0 616 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Ssh3Q8K330 649 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Coro1cQ9WUM4 474 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Col22a1E9Q7P1 1613 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Irgm2A0A140LIF8 407 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Cdc27A2A6Q5 825 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 AppP12023 770 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Krt86P97861 486 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Gbp4Q61107 620 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Mrps31Q61733 384 aaKnown RBP11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 AmphQ7TQF7 686 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Rassf2Q8BMS9 326 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Rec8Q8C5S7 591 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 Vps37cQ8R105 352 aa11.34□□□□□ -0.59
Copb1-201ENSMUST00000033012 C5P06684 1680 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Cfap99A0A140LIX9 648 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Pla2g4bP0C871 782 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 M6prP24668 278 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Stim2P83093 746 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 TmpoQ61033 693 aaKnown RBP11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Agtpbp1Q641K1 1218 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Efcab14Q8BGQ6 484 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Rbbp5Q8BX09 538 aaKnown RBP11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 BrapQ99MP8 591 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Pde3aQ9Z0X4 1141 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Map3k19E9Q3S4 1311 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Setdb1O88974 1307 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Gsdma2Q32M21 443 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Psmd1Q3TXS7 953 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Nab2Q61127 525 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 AarsQ8BGQ7 968 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Kirrel3Q8BR86 778 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Gtpbp10Q8K013 366 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Slf1Q8R3P9 1054 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Cbx6Q9DBY5 414 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Lztfl1Q9JHQ5 299 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Nfs1Q9Z1J3 459 aa11.33□□□□□ -0.6
Copb1-201ENSMUST00000033012 Hoxb7P09024 217 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Eif4a2P10630 407 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Gm28047Q3US59 414 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Srrm3Q80WV7 648 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Necab1Q8BG18 352 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Entpd5Q9WUZ9 427 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Slit2Q9R1B9 1521 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Ugt1a6bK9J7B2 531 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Myo1fP70248 1099 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Nlrp4cQ3TKR3 982 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Eif3j1Q3UGC7 261 aaKnown RBP11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Ugt1a6Q64435 531 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Eif3j2Q66JS6 263 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Ugt1a7cQ6ZQM8 531 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Rassf6Q80UQ2 353 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Epn1Q80VP1 575 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Enox1Q8BHR2 643 aaKnown RBP11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Ankk1Q8BZ25 745 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 PawrQ925B0 333 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 4933428M09RikQ9D3X3 192 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Mfap3lQ9D3X9 409 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Akap8Q9DBR0 687 aaKnown RBP11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Il1rapl2Q9ERS6 686 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Rps6ka3P18654 740 aaKnown RBP11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Cep131Q62036 1060 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Myo6Q64331 1265 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Pcdhb3Q91XZ7 784 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 PdhbQ9D051 359 aa11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Bag3Q9JLV1 577 aaKnown RBP11.32□□□□□ -0.6
Copb1-201ENSMUST00000033012 Ccng2O08918 344 aa11.31□□□□□ -0.6
Copb1-201ENSMUST00000033012 Pbx1P41778 430 aa11.31□□□□□ -0.6
Copb1-201ENSMUST00000033012 Slc7a1Q09143 622 aa11.31□□□□□ -0.6
Copb1-201ENSMUST00000033012 Ttf2Q5NC05 1138 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms