RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Ess2O70279 479 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Tcp11l1Q8BTG3 509 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Tubgcp6G5E8P0 1769 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Gm3409A0A0G2JE67 319 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 S100bP50114 92 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Irf5P56477 497 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Nop9Q8BMC4 636 aaKnown RBP12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Akap8Q9DBR0 687 aaKnown RBP12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Cib2Q9Z309 187 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Kiaa0556Q8C753 1610 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Ube3aO08759 870 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Atf5O70191 283 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Kif5cP28738 956 aaKnown RBP12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Xrcc4Q924T3 326 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Atad3Q925I1 591 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Cyp2ab1S4R196 498 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Terf1P70371 421 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Tmem132eQ6IEE6 982 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Asic1Q6NXK8 526 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Cnot6lQ8VEG6 555 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Nlgn1Q99K10 843 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Erbb4Q61527 1308 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Cyp7a1Q64505 503 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Spats2Q8K1N4 545 aaKnown RBP12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Taf5lQ91WQ5 589 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Dhx30Q99PU8 1217 aaKnown RBP12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 PrphP15331 475 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Hand2Q61039 217 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Depdc1bQ8BH88 529 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Me3Q8BMF3 604 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Zfp202Q8C879 641 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Ccdc124Q9D8X2 217 aaKnown RBP12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Ccdc155Q80VJ8 648 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Eif2aQ8BJW6 581 aaKnown RBP12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 St5Q924W7 1134 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 4933428M09RikQ9D3X3 192 aa12.09□□□□□ -0.47
Ciita-201ENSMUST00000023147 Btn2a2A4QPC6 514 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Plcb3P51432 1234 aaKnown RBP12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 PtpruB1AUH1 1446 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Stmn2P55821 179 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Plekhg2Q6KAU7 1340 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Vps52Q8C754 723 aaKnown RBP12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Atp2a1Q8R429 994 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Creld2Q9CYA0 350 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Dydc2Q9D3X8 139 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Mroh1E0CZ22 1640 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Nub1P54729 614 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 CoilQ5SU73 570 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Exoc3Q6KAR6 755 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Mtmr7Q9Z2C9 660 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Abca8aQ8K442 1620 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Spocd1B1ASB6 936 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Myo1aO88329 1043 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Rfc1P35601 1131 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Zc3h12cQ5DTV4 884 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ddx41Q91VN6 622 aaKnown RBP12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Nop56Q9D6Z1 580 aaKnown RBP12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 ChmQ9QXG2 665 aa12.08□□□□□ -0.48
Ciita-201ENSMUST00000023147 Xrn1P97789 1719 aaKnown RBP12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 GabpaQ00422 454 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Tbc1d5Q80XQ2 815 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Zmynd15Q8C0R7 736 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 SnrkQ8VDU5 748 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Pcdhb22Q91XZ8 794 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Six6os1Q9CTN5 574 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Tbc1d2B1AVH7 922 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Gm10378F6XQQ1 160 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Dclk3Q8BWQ5 790 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 NapgQ9CWZ7 312 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Topbp1Q6ZQF0 1515 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Taf4bG5E8Z2 855 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Rpl13P47963 211 aaKnown RBP12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Lin9Q8C735 542 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Amotl2Q8K371 772 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ccdc91Q9D8L5 442 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Atp12aQ9Z1W8 1035 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Tbc1d4Q8BYJ6 1307 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Gpr161B2RPY5 545 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Card6E9PWH2 1175 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Fchsd1Q6PFY1 688 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Cdca7lQ922M5 438 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Syce1Q9D495 329 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Tulp1Q9Z273 543 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 Kdm6aO70546 1401 aa12.07□□□□□ -0.48
Ciita-201ENSMUST00000023147 EspnlQ3UYR4 1005 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Arid3aQ62431 601 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ccdc25Q78PG9 208 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ankrd24Q80VM7 985 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Eef2kO08796 724 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Krt8P11679 490 aaKnown RBP12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 ErmnQ5EBJ4 281 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ankrd40Q5SUE8 363 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Apbb1ipQ8R5A3 670 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Rnf123Q5XPI3 1314 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Chd1P40201 1711 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ahdc1Q6PAL7 1594 aaKnown RBP12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Brpf3B2KF05 1204 aaKnown RBP12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Ttc37F8VPK0 1563 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 Gm1993A6X8I0 212 aa12.06□□□□□ -0.48
Ciita-201ENSMUST00000023147 SlxD3Z347 212 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms