RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Dcaf5Q80T85 946 aa18.56■□□□□ 0.56
Trim28-201ENSMUST00000005705 Bola3Q8CEI1 110 aa18.56■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ubac1Q8VDI7 409 aa18.56■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ktn1Q61595 1327 aaKnown RBP18.56■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ank1Q02357 1862 aa18.56■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ess2O70279 479 aa18.56■□□□□ 0.56
Trim28-201ENSMUST00000005705 Pde6aP27664 859 aa18.56■□□□□ 0.56
Trim28-201ENSMUST00000005705 Cdc37Q61081 379 aa18.56■□□□□ 0.56
Trim28-201ENSMUST00000005705 Dpf2Q61103 391 aaKnown RBP18.56■□□□□ 0.56
Trim28-201ENSMUST00000005705 Eno4Q8C042 619 aa18.56■□□□□ 0.56
Trim28-201ENSMUST00000005705 ImmtQ8CAQ8 757 aaKnown RBP18.56■□□□□ 0.56
Trim28-201ENSMUST00000005705 Nmt2O70311 529 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 Sun3Q5SS91 320 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ces3aQ63880 571 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 Tpm4Q6IRU2 248 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ces3bQ8VCU1 571 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 GdaQ9R111 454 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 Pcdhb14Q6PB90 796 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 Znf771Q8BJ90 317 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ttc12Q8BW49 704 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ehd4Q9EQP2 541 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 FocadA2AKG8 1798 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 H2afxP27661 143 aaKnown RBP18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 Cplx2P84086 134 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 Mdh1bQ5F204 500 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 Cdcp1Q5U462 833 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 Zeb2Q9R0G7 1215 aa18.55■□□□□ 0.56
Trim28-201ENSMUST00000005705 Gm43638A0A0J9YU36 694 aa18.54■□□□□ 0.56
Trim28-201ENSMUST00000005705 A0A1Y7VML8 143 aa18.54■□□□□ 0.56
Trim28-201ENSMUST00000005705 Zbtb38Q3LR78 1197 aa18.54■□□□□ 0.56
Trim28-201ENSMUST00000005705 Usp13Q5BKP2 858 aa18.54■□□□□ 0.56
Trim28-201ENSMUST00000005705 Fam53cQ8BXQ8 393 aa18.54■□□□□ 0.56
Trim28-201ENSMUST00000005705 Podxl2Q8CAE9 603 aa18.54■□□□□ 0.56
Trim28-201ENSMUST00000005705 Nek9Q8K1R7 984 aa18.54■□□□□ 0.56
Trim28-201ENSMUST00000005705 BaatQ91X34 420 aa18.54■□□□□ 0.56
Trim28-201ENSMUST00000005705 Sorbs3Q9R1Z8 733 aa18.54■□□□□ 0.56
Trim28-201ENSMUST00000005705 Kcnh3Q9WVJ0 1095 aa18.54■□□□□ 0.56
Trim28-201ENSMUST00000005705 IntuQ059U7 942 aa18.54■□□□□ 0.56
Trim28-201ENSMUST00000005705 Fam83bQ0VBM2 1012 aa18.54■□□□□ 0.56
Trim28-201ENSMUST00000005705 Kri1Q8VDQ9 704 aaKnown RBP18.54■□□□□ 0.56
Trim28-201ENSMUST00000005705 Mapkapk5O54992 473 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Dynll1P63168 89 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 MycbpapQ5SUV2 932 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ggt6Q6PDE7 497 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Fez2Q6TYB5 348 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Tmco3Q8BH01 678 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Epc1Q8C9X6 813 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Tmem143Q8VD26 458 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Zcchc17Q9ESX4 241 aaKnown RBP18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Rgs12Q8CGE9 1381 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Arid4aF8VPQ2 1261 aaKnown RBP18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Sdc2P43407 202 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Usp50Q6P8X6 390 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Gnl3lQ6PGG6 577 aaKnown RBP18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ccdc39Q9D5Y1 937 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Hdac6Q9Z2V5 1149 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Stx8O88983 236 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Nup133Q8R0G9 1155 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Mtmr6Q8VE11 617 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ndufb9Q9CQJ8 179 aa18.53■□□□□ 0.56
Trim28-201ENSMUST00000005705 Calcoco2A2A6M5 331 aa18.52■□□□□ 0.56
Trim28-201ENSMUST00000005705 Trim34bJ3QNR8 485 aa18.52■□□□□ 0.56
Trim28-201ENSMUST00000005705 Gm28047Q3US59 414 aa18.52■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ncoa7Q6DFV7 943 aa18.52■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ppp2r2cQ8BG02 447 aa18.52■□□□□ 0.56
Trim28-201ENSMUST00000005705 Nod2Q8K3Z0 1020 aa18.52■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ccdc12Q8R344 166 aaKnown RBP18.52■□□□□ 0.56
Trim28-201ENSMUST00000005705 AtrnQ9WU60 1428 aa18.52■□□□□ 0.56
Trim28-201ENSMUST00000005705 Prkag3Q8BGM7 489 aa18.52■□□□□ 0.55
Trim28-201ENSMUST00000005705 Lrrc6O88978 473 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Usp53P15975 1069 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Evc2Q8K1G2 1220 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Gm5624F6ZZG8 207 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Gjb4Q02738 266 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Fam160b2Q80YR2 744 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Tmem87aQ8BXN9 555 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Baiap2l1Q9DBJ3 514 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Eif2ak3Q9Z2B5 1114 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Npc1l1Q6T3U4 1333 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Il7P10168 154 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Wnt7aP24383 349 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Ifit1bl2Q3U687 466 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Ell2Q3UKU1 639 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Kctd19Q562E2 927 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Slx1bQ8BX32 270 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Ciao1Q99KN2 339 aa18.51■□□□□ 0.55
Trim28-201ENSMUST00000005705 Eva1cP58659 440 aa18.5■□□□□ 0.55
Trim28-201ENSMUST00000005705 ItpripQ3TNL8 555 aa18.5■□□□□ 0.55
Trim28-201ENSMUST00000005705 Gdap1l1Q8VE33 370 aa18.5■□□□□ 0.55
Trim28-201ENSMUST00000005705 Mis18aQ9CZJ6 204 aa18.5■□□□□ 0.55
Trim28-201ENSMUST00000005705 Pde8bE9Q4S1 865 aa18.5■□□□□ 0.55
Trim28-201ENSMUST00000005705 1700013D24RikQ0P521 120 aa18.5■□□□□ 0.55
Trim28-201ENSMUST00000005705 HelbQ6NVF4 1074 aa18.5■□□□□ 0.55
Trim28-201ENSMUST00000005705 Pcdhgc5Q91XW9 944 aa18.5■□□□□ 0.55
Trim28-201ENSMUST00000005705 NsmfQ99NF2 532 aa18.5■□□□□ 0.55
Trim28-201ENSMUST00000005705 Yeats4Q9CR11 227 aaKnown RBP18.5■□□□□ 0.55
Trim28-201ENSMUST00000005705 SelenooQ9DBC0 667 aa18.5■□□□□ 0.55
Trim28-201ENSMUST00000005705 Tiam2Q6ZPF3 1715 aa18.5■□□□□ 0.55
Trim28-201ENSMUST00000005705 Sik3Q6P4S6 1311 aa18.5■□□□□ 0.55
Trim28-201ENSMUST00000005705 Tbc1d2B1AVH7 922 aa18.49■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms