RNA–Protein interactions for RNA: YPR026W

ATH1, Transcript of Acid trehalase required for utilization of extracellular trehalose, yeastyeast

Gene ATH1, Length 3,636 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATH1YPR026W SMC4Q12267 1418 aa6.86□□□□□ -1.31
ATH1YPR026W YRF1-1P0CX20 1796 aa6.85□□□□□ -1.31
ATH1YPR026W YRF1-5P0CX21 1796 aa6.85□□□□□ -1.31
ATH1YPR026W YRF1-8P0CX22 1796 aa6.85□□□□□ -1.31
ATH1YPR026W SNU71P53207 620 aaKnown RBP6.84□□□□□ -1.31
ATH1YPR026W STU1P38198 1513 aa6.84□□□□□ -1.31
ATH1YPR026W DMA2P53924 522 aa6.84□□□□□ -1.31
ATH1YPR026W MLP2P40457 1679 aa6.84□□□□□ -1.32
ATH1YPR026W MYO4P32492 1471 aa6.82□□□□□ -1.32
ATH1YPR026W DNF1P32660 1571 aa6.8□□□□□ -1.32
ATH1YPR026W CWC22P53333 577 aaKnown RBP6.8□□□□□ -1.32
ATH1YPR026W AIM44Q99299 758 aa6.77□□□□□ -1.32
ATH1YPR026W UFD4P33202 1483 aa6.77□□□□□ -1.33
ATH1YPR026W IRC20Q06554 1556 aa6.77□□□□□ -1.33
ATH1YPR026W ULS1Q08562 1619 aa6.76□□□□□ -1.33
ATH1YPR026W RPS0BP46654 252 aaKnown RBP6.75□□□□□ -1.33
ATH1YPR026W PAN1P32521 1480 aa6.75□□□□□ -1.33
ATH1YPR026W MET5P47169 1442 aa6.74□□□□□ -1.33
ATH1YPR026W MDG1P53885 366 aa6.73□□□□□ -1.33
ATH1YPR026W TAF2P23255 1407 aa6.73□□□□□ -1.33
ATH1YPR026W SNQ2P32568 1501 aaKnown RBP6.71□□□□□ -1.34
ATH1YPR026W CAB3P36076 571 aa6.71□□□□□ -1.34
ATH1YPR026W TOP1P04786 769 aa6.7□□□□□ -1.34
ATH1YPR026W BNI1P41832 1953 aa6.7□□□□□ -1.34
ATH1YPR026W SNT2P53127 1403 aa6.69□□□□□ -1.34
ATH1YPR026W PDR12Q02785 1511 aa6.69□□□□□ -1.34
ATH1YPR026W ATG36P46983 293 aa6.69□□□□□ -1.34
ATH1YPR026W NUP170P38181 1502 aa6.68□□□□□ -1.34
ATH1YPR026W SPO14P36126 1683 aa6.68□□□□□ -1.34
ATH1YPR026W MMS22Q06164 1454 aa6.68□□□□□ -1.34
ATH1YPR026W VTH1P40438 1549 aa6.67□□□□□ -1.34
ATH1YPR026W VTH2P40890 1549 aa6.67□□□□□ -1.34
ATH1YPR026W LEU3P08638 886 aa6.66□□□□□ -1.34
ATH1YPR026W YBT1P32386 1661 aa6.66□□□□□ -1.34
ATH1YPR026W SWE1P32944 819 aa6.65□□□□□ -1.34
ATH1YPR026W SKI3P17883 1432 aaKnown RBP6.64□□□□□ -1.35
ATH1YPR026W PDR10P51533 1564 aa6.63□□□□□ -1.35
ATH1YPR026W LAM6Q08001 693 aa6.59□□□□□ -1.35
ATH1YPR026W DOP1Q03921 1698 aa6.58□□□□□ -1.36
ATH1YPR026W GDB1Q06625 1536 aa6.58□□□□□ -1.36
ATH1YPR026W SPP41P38904 1435 aa6.57□□□□□ -1.36
ATH1YPR026W CHC1P22137 1653 aaKnown RBP6.57□□□□□ -1.36
ATH1YPR026W TY3B-GQ99315 1547 aa6.57□□□□□ -1.36
ATH1YPR026W RLP24Q07915 199 aaKnown RBP6.56□□□□□ -1.36
ATH1YPR026W TPO2P53283 614 aa6.56□□□□□ -1.36
ATH1YPR026W RSE1Q04693 1361 aaKnown RBP6.56□□□□□ -1.36
ATH1YPR026W YTA7P40340 1379 aa6.55□□□□□ -1.36
ATH1YPR026W TSC11P40061 1430 aa6.55□□□□□ -1.36
ATH1YPR026W HAP1P0CE41 1502 aa6.55□□□□□ -1.36
ATH1YPR026W YAH1Q12184 172 aaKnown RBP6.54□□□□□ -1.36
ATH1YPR026W RLF2Q12495 606 aa6.54□□□□□ -1.36
ATH1YPR026W GIN4Q12263 1142 aa6.53□□□□□ -1.36
ATH1YPR026W BRL1P38770 471 aa6.52□□□□□ -1.36
ATH1YPR026W LTE1P07866 1435 aa6.52□□□□□ -1.37
ATH1YPR026W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
ATH1YPR026W PSH1Q12161 406 aa6.52□□□□□ -1.37
ATH1YPR026W RPL17AP05740 184 aaKnown RBP6.5□□□□□ -1.37
ATH1YPR026W RPL17BP46990 184 aaKnown RBP6.5□□□□□ -1.37
ATH1YPR026W VPS15P22219 1454 aa6.5□□□□□ -1.37
ATH1YPR026W NUG1P40010 520 aaKnown RBP6.49□□□□□ -1.37
ATH1YPR026W GEA2P39993 1459 aaKnown RBP6.49□□□□□ -1.37
ATH1YPR026W MNN4P36044 1178 aa6.47□□□□□ -1.37
ATH1YPR026W SAS10Q12136 610 aaPredicted RBP6.47□□□□□ -1.37
ATH1YPR026W BUD3P25558 1636 aa6.47□□□□□ -1.37
ATH1YPR026W ISW1P38144 1129 aa6.47□□□□□ -1.37
ATH1YPR026W YML020WQ03722 664 aa6.47□□□□□ -1.37
ATH1YPR026W ARO1P08566 1588 aaKnown RBP6.46□□□□□ -1.37
ATH1YPR026W DNF2Q12675 1612 aa6.46□□□□□ -1.38
ATH1YPR026W NUP159P40477 1460 aa6.46□□□□□ -1.38
ATH1YPR026W PDR15Q04182 1529 aaKnown RBP6.45□□□□□ -1.38
ATH1YPR026W TIF4632P39936 914 aaKnown RBP6.44□□□□□ -1.38
ATH1YPR026W REB1P21538 810 aa6.42□□□□□ -1.38
ATH1YPR026W NOP8Q08287 484 aaPredicted RBP6.42□□□□□ -1.38
ATH1YPR026W HIF1Q12373 385 aa6.42□□□□□ -1.38
ATH1YPR026W ENV11P53246 860 aa6.4□□□□□ -1.38
ATH1YPR026W IQG1Q12280 1495 aa6.4□□□□□ -1.38
ATH1YPR026W TOA1P32773 286 aa6.4□□□□□ -1.38
ATH1YPR026W TRM3Q07527 1436 aa6.4□□□□□ -1.38
ATH1YPR026W RPN1P38764 993 aaKnown RBP6.39□□□□□ -1.39
ATH1YPR026W BUD21Q08492 214 aaPredicted RBP6.39□□□□□ -1.39
ATH1YPR026W SUB1P54000 292 aaKnown RBP6.39□□□□□ -1.39
ATH1YPR026W TRM732Q03496 1420 aa6.38□□□□□ -1.39
ATH1YPR026W YJR008WP47085 338 aa6.38□□□□□ -1.39
ATH1YPR026W CAT8P39113 1433 aa6.37□□□□□ -1.39
ATH1YPR026W SSA1P10591 642 aaKnown RBP6.37□□□□□ -1.39
ATH1YPR026W SSA2P10592 639 aaKnown RBP6.37□□□□□ -1.39
ATH1YPR026W SEC7P11075 2009 aaKnown RBP6.36□□□□□ -1.39
ATH1YPR026W FAR11P53917 953 aa6.36□□□□□ -1.39
ATH1YPR026W YOR093CQ12275 1648 aa6.36□□□□□ -1.39
ATH1YPR026W NHA1Q99271 985 aa6.35□□□□□ -1.39
ATH1YPR026W PDR5P33302 1511 aaKnown RBP6.35□□□□□ -1.39
ATH1YPR026W DEF1P35732 738 aaKnown RBP6.35□□□□□ -1.39
ATH1YPR026W NOP2P40991 618 aaKnown RBP6.35□□□□□ -1.39
ATH1YPR026W DAL5P15365 543 aa6.34□□□□□ -1.39
ATH1YPR026W SSP1P38871 571 aa6.34□□□□□ -1.39
ATH1YPR026W BRN1P38170 754 aa6.33□□□□□ -1.4
ATH1YPR026W RTS3P53289 263 aa6.33□□□□□ -1.4
ATH1YPR026W SPC42P36094 363 aa6.32□□□□□ -1.4
ATH1YPR026W STH1P32597 1359 aa6.31□□□□□ -1.4
ATH1YPR026W VPS72Q03388 795 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms