RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W TAF7Q05021 590 aa9.85□□□□□ -0.83
CTF19YPL018W HAA1Q12753 694 aaKnown RBP9.84□□□□□ -0.83
CTF19YPL018W RTT106P40161 455 aa9.82□□□□□ -0.84
CTF19YPL018W SNQ2P32568 1501 aaKnown RBP9.82□□□□□ -0.84
CTF19YPL018W RPA190P10964 1664 aaKnown RBP9.81□□□□□ -0.84
CTF19YPL018W NUP159P40477 1460 aa9.79□□□□□ -0.84
CTF19YPL018W IFH1P39520 1085 aa9.78□□□□□ -0.84
CTF19YPL018W SNT2P53127 1403 aa9.75□□□□□ -0.85
CTF19YPL018W MET10P39692 1035 aa9.72□□□□□ -0.85
CTF19YPL018W TY1B-JR2P47100 1755 aaKnown RBP9.71□□□□□ -0.85
CTF19YPL018W TY1B-ER2Q03619 1755 aa9.71□□□□□ -0.85
CTF19YPL018W TY1B-MR1Q04214 1755 aa9.71□□□□□ -0.85
CTF19YPL018W TY1B-MR2Q04670 1755 aaKnown RBP9.71□□□□□ -0.85
CTF19YPL018W TY1B-LR1Q12088 1755 aaKnown RBP9.71□□□□□ -0.85
CTF19YPL018W TY1B-NL1Q12112 1755 aa9.71□□□□□ -0.85
CTF19YPL018W TY1B-GR1Q12141 1755 aa9.71□□□□□ -0.85
CTF19YPL018W TY1B-BLQ12490 1755 aa9.71□□□□□ -0.85
CTF19YPL018W LTE1P07866 1435 aa9.7□□□□□ -0.86
CTF19YPL018W NTE1Q04958 1679 aa9.68□□□□□ -0.86
CTF19YPL018W PDR15Q04182 1529 aaKnown RBP9.68□□□□□ -0.86
CTF19YPL018W VPS15P22219 1454 aa9.66□□□□□ -0.86
CTF19YPL018W GEA2P39993 1459 aaKnown RBP9.66□□□□□ -0.86
CTF19YPL018W RPO21P04050 1733 aaKnown RBP9.65□□□□□ -0.86
CTF19YPL018W MLP2P40457 1679 aa9.64□□□□□ -0.87
CTF19YPL018W GEA1P47102 1408 aaPredicted RBP9.63□□□□□ -0.87
CTF19YPL018W ULS1Q08562 1619 aa9.63□□□□□ -0.87
CTF19YPL018W RPL17AP05740 184 aaKnown RBP9.6□□□□□ -0.87
CTF19YPL018W RPL17BP46990 184 aaKnown RBP9.6□□□□□ -0.87
CTF19YPL018W YRF1-1P0CX20 1796 aa9.6□□□□□ -0.87
CTF19YPL018W YRF1-5P0CX21 1796 aa9.6□□□□□ -0.87
CTF19YPL018W YRF1-8P0CX22 1796 aa9.6□□□□□ -0.87
CTF19YPL018W ITT1Q04638 464 aa9.59□□□□□ -0.87
CTF19YPL018W NUP157P40064 1391 aaKnown RBP9.58□□□□□ -0.88
CTF19YPL018W DRS2P39524 1355 aa9.57□□□□□ -0.88
CTF19YPL018W PDR12Q02785 1511 aa9.54□□□□□ -0.88
CTF19YPL018W CKB1P43639 278 aa9.53□□□□□ -0.88
CTF19YPL018W CAT8P39113 1433 aa9.52□□□□□ -0.89
CTF19YPL018W IRC20Q06554 1556 aa9.52□□□□□ -0.89
CTF19YPL018W SPO14P36126 1683 aa9.51□□□□□ -0.89
CTF19YPL018W GDB1Q06625 1536 aa9.49□□□□□ -0.89
CTF19YPL018W IQG1Q12280 1495 aa9.48□□□□□ -0.89
CTF19YPL018W NUP170P38181 1502 aa9.48□□□□□ -0.89
CTF19YPL018W PDR10P51533 1564 aa9.47□□□□□ -0.89
CTF19YPL018W IKI3Q06706 1349 aaKnown RBP9.47□□□□□ -0.89
CTF19YPL018W TY3B-GQ99315 1547 aa9.46□□□□□ -0.89
CTF19YPL018W MMS1Q06211 1407 aa9.45□□□□□ -0.9
CTF19YPL018W TSR3Q12094 313 aaKnown RBP9.43□□□□□ -0.9
CTF19YPL018W BNI1P41832 1953 aa9.43□□□□□ -0.9
CTF19YPL018W REB1P21538 810 aa9.42□□□□□ -0.9
CTF19YPL018W BUD3P25558 1636 aa9.4□□□□□ -0.9
CTF19YPL018W SRB8P25648 1427 aa9.38□□□□□ -0.91
CTF19YPL018W YBT1P32386 1661 aa9.37□□□□□ -0.91
CTF19YPL018W YSP2Q06681 1438 aa9.37□□□□□ -0.91
CTF19YPL018W TRM3Q07527 1436 aa9.37□□□□□ -0.91
CTF19YPL018W ARO1P08566 1588 aaKnown RBP9.37□□□□□ -0.91
CTF19YPL018W ABP1P15891 592 aaKnown RBP9.36□□□□□ -0.91
CTF19YPL018W BUD21Q08492 214 aaPredicted RBP9.36□□□□□ -0.91
CTF19YPL018W BNR1P40450 1375 aa9.36□□□□□ -0.91
CTF19YPL018W SSM4P40318 1319 aa9.35□□□□□ -0.91
CTF19YPL018W SPT21P35209 758 aa9.31□□□□□ -0.92
CTF19YPL018W DOP1Q03921 1698 aa9.28□□□□□ -0.92
CTF19YPL018W URN1Q06525 465 aaKnown RBP9.22□□□□□ -0.93
CTF19YPL018W MIF2P35201 549 aa9.2□□□□□ -0.94
CTF19YPL018W SEC7P11075 2009 aaKnown RBP9.2□□□□□ -0.94
CTF19YPL018W DNF2Q12675 1612 aa9.2□□□□□ -0.94
CTF19YPL018W YAP3P38749 330 aa9.19□□□□□ -0.94
CTF19YPL018W CHC1P22137 1653 aaKnown RBP9.17□□□□□ -0.94
CTF19YPL018W RIM101P33400 625 aa9.16□□□□□ -0.94
CTF19YPL018W IPL1P38991 367 aa9.12□□□□□ -0.95
CTF19YPL018W PAF1P38351 445 aa9.11□□□□□ -0.95
CTF19YPL018W TYS1P36421 394 aaKnown RBP9.09□□□□□ -0.95
CTF19YPL018W YOR093CQ12275 1648 aa9.09□□□□□ -0.95
CTF19YPL018W NOP7P53261 605 aaKnown RBP9.07□□□□□ -0.96
CTF19YPL018W MRPL32P25348 183 aa9.05□□□□□ -0.96
CTF19YPL018W MAK10Q02197 733 aa9.04□□□□□ -0.96
CTF19YPL018W GCN2P15442 1659 aa9.03□□□□□ -0.96
CTF19YPL018W PDR5P33302 1511 aaKnown RBP9.02□□□□□ -0.97
CTF19YPL018W NUP188P52593 1655 aaKnown RBP9.01□□□□□ -0.97
CTF19YPL018W IML1P47170 1584 aa9.01□□□□□ -0.97
CTF19YPL018W VMR1P38735 1592 aa9□□□□□ -0.97
CTF19YPL018W PDR11P40550 1411 aa8.99□□□□□ -0.97
CTF19YPL018W YKR023WP36119 530 aaKnown RBP8.99□□□□□ -0.97
CTF19YPL018W DNF3Q12674 1656 aa8.97□□□□□ -0.97
CTF19YPL018W RAV1P47104 1357 aa8.97□□□□□ -0.97
CTF19YPL018W BUD31P25337 157 aaPredicted RBP8.95□□□□□ -0.98
CTF19YPL018W RTC1Q08281 1341 aa8.94□□□□□ -0.98
CTF19YPL018W YFR006WP43590 535 aa8.93□□□□□ -0.98
CTF19YPL018W MRX12P47084 519 aa8.91□□□□□ -0.98
CTF19YPL018W OXP1P28273 1286 aa8.9□□□□□ -0.98
CTF19YPL018W TAF5P38129 798 aa8.89□□□□□ -0.99
CTF19YPL018W HAP1P0CE41 1502 aa8.88□□□□□ -0.99
CTF19YPL018W ESL2P36168 1195 aa8.87□□□□□ -0.99
CTF19YPL018W ALD4P46367 519 aaKnown RBP8.86□□□□□ -0.99
CTF19YPL018W RIA1P53893 1110 aa8.86□□□□□ -0.99
CTF19YPL018W CAB1Q04430 367 aa8.86□□□□□ -0.99
CTF19YPL018W RAD9P14737 1309 aa8.85□□□□□ -0.99
CTF19YPL018W YMR196WQ04336 1088 aa8.85□□□□□ -0.99
CTF19YPL018W KRE5P22023 1365 aa8.85□□□□□ -0.99
CTF19YPL018W YGL015CP33199 130 aa8.84□□□□□ -0.99
CTF19YPL018W ORC1P54784 914 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms