RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP1YOR098C CPS1P27614 576 aa7.44□□□□□ -1.22
NUP1YOR098C ERG12P07277 443 aa7.44□□□□□ -1.22
NUP1YOR098C BBC1P47068 1157 aa7.44□□□□□ -1.22
NUP1YOR098C COQ8P27697 501 aa7.43□□□□□ -1.22
NUP1YOR098C SPC42P36094 363 aa7.43□□□□□ -1.22
NUP1YOR098C CDC3P32457 520 aaKnown RBP7.42□□□□□ -1.22
NUP1YOR098C HEM3P28789 327 aa7.42□□□□□ -1.22
NUP1YOR098C RPL34AP87262 121 aaPredicted RBP7.41□□□□□ -1.22
NUP1YOR098C NOB1Q08444 459 aaKnown RBP7.41□□□□□ -1.22
NUP1YOR098C ATG36P46983 293 aa7.41□□□□□ -1.22
NUP1YOR098C FAR11P53917 953 aa7.41□□□□□ -1.22
NUP1YOR098C YRB30P53107 440 aaPredicted RBP7.4□□□□□ -1.22
NUP1YOR098C RTG3P38165 486 aa7.4□□□□□ -1.23
NUP1YOR098C OCA5P38738 679 aa7.4□□□□□ -1.23
NUP1YOR098C LAM6Q08001 693 aa7.39□□□□□ -1.23
NUP1YOR098C COX6P00427 148 aa7.39□□□□□ -1.23
NUP1YOR098C TIF1P10081 395 aaKnown RBP7.39□□□□□ -1.23
NUP1YOR098C SSA2P10592 639 aaKnown RBP7.38□□□□□ -1.23
NUP1YOR098C TTI1P36097 1038 aa7.37□□□□□ -1.23
NUP1YOR098C DOS2P54858 310 aa7.37□□□□□ -1.23
NUP1YOR098C RPL34BP40525 121 aaKnown RBP7.36□□□□□ -1.23
NUP1YOR098C CSN12P47130 423 aa7.35□□□□□ -1.23
NUP1YOR098C BCH2P36122 765 aa7.35□□□□□ -1.23
NUP1YOR098C NUG1P40010 520 aaKnown RBP7.35□□□□□ -1.23
NUP1YOR098C HAT1Q12341 374 aa7.35□□□□□ -1.23
NUP1YOR098C YPR204WQ08995 1032 aa7.34□□□□□ -1.23
NUP1YOR098C YML083CQ04526 418 aa7.33□□□□□ -1.24
NUP1YOR098C SWE1P32944 819 aa7.32□□□□□ -1.24
NUP1YOR098C NOP53Q12080 455 aaKnown RBP7.32□□□□□ -1.24
NUP1YOR098C ITT1Q04638 464 aa7.31□□□□□ -1.24
NUP1YOR098C ALD4P46367 519 aaKnown RBP7.31□□□□□ -1.24
NUP1YOR098C BIO2P32451 375 aa7.3□□□□□ -1.24
NUP1YOR098C EDS1P38073 919 aa7.3□□□□□ -1.24
NUP1YOR098C YJR008WP47085 338 aa7.3□□□□□ -1.24
NUP1YOR098C KTR1P27810 393 aaKnown RBP7.29□□□□□ -1.24
NUP1YOR098C RTS3P53289 263 aa7.29□□□□□ -1.24
NUP1YOR098C IPL1P38991 367 aa7.29□□□□□ -1.24
NUP1YOR098C EPS1P40557 701 aa7.29□□□□□ -1.24
NUP1YOR098C FAP1P53971 965 aa7.29□□□□□ -1.24
NUP1YOR098C RTG2P32608 588 aaKnown RBP7.28□□□□□ -1.24
NUP1YOR098C UBP14P38237 781 aaKnown RBP7.28□□□□□ -1.24
NUP1YOR098C ALD2P47771 506 aa7.28□□□□□ -1.24
NUP1YOR098C VPS29P38759 282 aa7.27□□□□□ -1.24
NUP1YOR098C PUP1P25043 261 aa7.27□□□□□ -1.25
NUP1YOR098C MIF2P35201 549 aa7.27□□□□□ -1.25
NUP1YOR098C YBL036CP38197 257 aa7.25□□□□□ -1.25
NUP1YOR098C YAF9P53930 226 aa7.25□□□□□ -1.25
NUP1YOR098C FPR4Q06205 392 aaPredicted RBP7.25□□□□□ -1.25
NUP1YOR098C CDC27P38042 758 aa7.24□□□□□ -1.25
NUP1YOR098C YDR090CQ03193 310 aa7.24□□□□□ -1.25
NUP1YOR098C ASF1P32447 279 aa7.23□□□□□ -1.25
NUP1YOR098C CST6P40535 587 aa7.23□□□□□ -1.25
NUP1YOR098C TYW1Q08960 810 aaKnown RBP7.23□□□□□ -1.25
NUP1YOR098C YNL108CP53929 270 aa7.22□□□□□ -1.25
NUP1YOR098C KEX1P09620 729 aa7.21□□□□□ -1.26
NUP1YOR098C BDF1P35817 686 aa7.21□□□□□ -1.26
NUP1YOR098C NMD2P38798 1089 aaKnown RBP7.21□□□□□ -1.26
NUP1YOR098C RRP15Q06511 250 aaPredicted RBP7.21□□□□□ -1.26
NUP1YOR098C STM1P39015 273 aaKnown RBP7.21□□□□□ -1.26
NUP1YOR098C SUB1P54000 292 aaKnown RBP7.21□□□□□ -1.26
NUP1YOR098C NNF1P47149 201 aa7.2□□□□□ -1.26
NUP1YOR098C VHR2P40041 505 aa7.2□□□□□ -1.26
NUP1YOR098C PSE1P32337 1089 aaKnown RBP7.18□□□□□ -1.26
NUP1YOR098C YBL113CQ7M4S9 792 aa7.18□□□□□ -1.26
NUP1YOR098C ATE1P16639 503 aa7.18□□□□□ -1.26
NUP1YOR098C VPS72Q03388 795 aa7.17□□□□□ -1.26
NUP1YOR098C SEC20P28791 383 aa7.16□□□□□ -1.26
NUP1YOR098C STS1P38637 319 aa7.16□□□□□ -1.26
NUP1YOR098C RNH70P53331 553 aa7.16□□□□□ -1.26
NUP1YOR098C SPA2P23201 1466 aaKnown RBP7.16□□□□□ -1.26
NUP1YOR098C SGS1P35187 1447 aa7.16□□□□□ -1.26
NUP1YOR098C ENO1P00924 437 aaKnown RBP7.16□□□□□ -1.26
NUP1YOR098C UBX5Q06682 500 aa7.15□□□□□ -1.26
NUP1YOR098C SUP45P12385 437 aaKnown RBP7.15□□□□□ -1.27
NUP1YOR098C TPO2P53283 614 aa7.15□□□□□ -1.27
NUP1YOR098C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
NUP1YOR098C PTC3P34221 468 aaKnown RBP7.14□□□□□ -1.27
NUP1YOR098C ERP5P38819 212 aa7.14□□□□□ -1.27
NUP1YOR098C MSC6Q08818 692 aaKnown RBP7.14□□□□□ -1.27
NUP1YOR098C MRPL32P25348 183 aa7.13□□□□□ -1.27
NUP1YOR098C TGL4P36165 910 aa7.13□□□□□ -1.27
NUP1YOR098C POL32P47110 350 aa7.13□□□□□ -1.27
NUP1YOR098C OSW7P43611 510 aa7.12□□□□□ -1.27
NUP1YOR098C BUD21Q08492 214 aaPredicted RBP7.12□□□□□ -1.27
NUP1YOR098C YLR326WQ06170 240 aaKnown RBP7.12□□□□□ -1.27
NUP1YOR098C TEA1P47988 759 aa7.12□□□□□ -1.27
NUP1YOR098C MRX10Q05648 414 aa7.12□□□□□ -1.27
NUP1YOR098C ENO2P00925 437 aaKnown RBP7.11□□□□□ -1.27
NUP1YOR098C YOL098CQ12496 1037 aa7.11□□□□□ -1.27
NUP1YOR098C MAG2Q06436 670 aaKnown RBP7.11□□□□□ -1.27
NUP1YOR098C RAD59Q12223 238 aa7.11□□□□□ -1.27
NUP1YOR098C SVF1Q05515 481 aa7.1□□□□□ -1.27
NUP1YOR098C TOM20P35180 183 aa7.1□□□□□ -1.27
NUP1YOR098C SIS2P36024 562 aa7.1□□□□□ -1.27
NUP1YOR098C GIN4Q12263 1142 aa7.1□□□□□ -1.27
NUP1YOR098C CSE4P36012 229 aa7.09□□□□□ -1.27
NUP1YOR098C YMR1P47147 688 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
NUP1YOR098C YHL050CP38721 697 aa7.09□□□□□ -1.27
NUP1YOR098C YHR219WP38900 624 aa7.09□□□□□ -1.27
NUP1YOR098C YFR006WP43590 535 aa7.09□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms