RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W NOP7P53261 605 aaKnown RBP7.66□□□□□ -1.18
VPS5YOR069W RPC31P17890 251 aa7.64□□□□□ -1.19
VPS5YOR069W YFR016CP43597 1233 aaKnown RBP7.64□□□□□ -1.19
VPS5YOR069W YBT1P32386 1661 aa7.63□□□□□ -1.19
VPS5YOR069W ESC1Q03661 1658 aaKnown RBP7.63□□□□□ -1.19
VPS5YOR069W FUN12P39730 1002 aaKnown RBP7.62□□□□□ -1.19
VPS5YOR069W SNT2P53127 1403 aa7.62□□□□□ -1.19
VPS5YOR069W RQC2Q12532 1038 aaKnown RBP7.62□□□□□ -1.19
VPS5YOR069W VTH1P40438 1549 aa7.62□□□□□ -1.19
VPS5YOR069W VTH2P40890 1549 aa7.62□□□□□ -1.19
VPS5YOR069W OPY1P38271 328 aa7.61□□□□□ -1.19
VPS5YOR069W GCN2P15442 1659 aa7.59□□□□□ -1.19
VPS5YOR069W CAT8P39113 1433 aa7.59□□□□□ -1.19
VPS5YOR069W EAF7P53911 425 aaKnown RBP7.59□□□□□ -1.19
VPS5YOR069W TY1B-HO13535 1793 aa7.57□□□□□ -1.2
VPS5YOR069W TY1B-DR5P0C2I2 1755 aa7.57□□□□□ -1.2
VPS5YOR069W TY1B-DR6P0C2I3 1755 aa7.57□□□□□ -1.2
VPS5YOR069W TY1B-LR2P0C2I5 1755 aa7.57□□□□□ -1.2
VPS5YOR069W TY1B-LR3P0C2I6 1755 aaKnown RBP7.57□□□□□ -1.2
VPS5YOR069W TY1B-PR1P0C2I9 1755 aaKnown RBP7.57□□□□□ -1.2
VPS5YOR069W TY1B-PR2P0C2J0 1756 aa7.57□□□□□ -1.2
VPS5YOR069W TY1B-PR3P0C2J1 1755 aaKnown RBP7.57□□□□□ -1.2
VPS5YOR069W TY1B-JR1P47098 1755 aa7.57□□□□□ -1.2
VPS5YOR069W TY1B-ML2Q03434 1755 aaKnown RBP7.57□□□□□ -1.2
VPS5YOR069W TY1B-ER1Q03612 1755 aa7.57□□□□□ -1.2
VPS5YOR069W TY1B-ML1Q04711 1755 aaKnown RBP7.57□□□□□ -1.2
VPS5YOR069W TY1B-GR2Q12269 1755 aa7.57□□□□□ -1.2
VPS5YOR069W TY1B-OLQ12273 1755 aa7.57□□□□□ -1.2
VPS5YOR069W TY1B-PLQ12414 1755 aaKnown RBP7.57□□□□□ -1.2
VPS5YOR069W PDS5Q04264 1277 aa7.56□□□□□ -1.2
VPS5YOR069W IRC20Q06554 1556 aa7.54□□□□□ -1.2
VPS5YOR069W CKB1P43639 278 aa7.54□□□□□ -1.2
VPS5YOR069W PDR5P33302 1511 aaKnown RBP7.53□□□□□ -1.2
VPS5YOR069W TCB2P48231 1178 aa7.53□□□□□ -1.2
VPS5YOR069W NST1P53935 1240 aa7.53□□□□□ -1.2
VPS5YOR069W GDB1Q06625 1536 aa7.53□□□□□ -1.2
VPS5YOR069W MNN4P36044 1178 aa7.52□□□□□ -1.2
VPS5YOR069W FPR3P38911 411 aaKnown RBP7.52□□□□□ -1.2
VPS5YOR069W GEA2P39993 1459 aaKnown RBP7.52□□□□□ -1.21
VPS5YOR069W TY1B-BRQ12193 1756 aa7.52□□□□□ -1.21
VPS5YOR069W TY1B-GR3Q12316 1755 aa7.52□□□□□ -1.21
VPS5YOR069W TY1B-ORQ92393 1755 aa7.52□□□□□ -1.21
VPS5YOR069W BUD21Q08492 214 aaPredicted RBP7.52□□□□□ -1.21
VPS5YOR069W PAF1P38351 445 aa7.51□□□□□ -1.21
VPS5YOR069W ARO1P08566 1588 aaKnown RBP7.5□□□□□ -1.21
VPS5YOR069W CDC45Q08032 650 aa7.5□□□□□ -1.21
VPS5YOR069W CDC25P04821 1589 aa7.49□□□□□ -1.21
VPS5YOR069W SNF7P39929 240 aaKnown RBP7.49□□□□□ -1.21
VPS5YOR069W TY1B-JR2P47100 1755 aaKnown RBP7.48□□□□□ -1.21
VPS5YOR069W TY1B-ER2Q03619 1755 aa7.48□□□□□ -1.21
VPS5YOR069W TY1B-MR1Q04214 1755 aa7.48□□□□□ -1.21
VPS5YOR069W TY1B-MR2Q04670 1755 aaKnown RBP7.48□□□□□ -1.21
VPS5YOR069W TY1B-LR1Q12088 1755 aaKnown RBP7.48□□□□□ -1.21
VPS5YOR069W TY1B-NL1Q12112 1755 aa7.48□□□□□ -1.21
VPS5YOR069W TY1B-GR1Q12141 1755 aa7.48□□□□□ -1.21
VPS5YOR069W TY1B-BLQ12490 1755 aa7.48□□□□□ -1.21
VPS5YOR069W VPS27P40343 622 aaKnown RBP7.48□□□□□ -1.21
VPS5YOR069W RVB2Q12464 471 aaKnown RBP7.48□□□□□ -1.21
VPS5YOR069W TY3B-IQ7LHG5 1498 aaKnown RBP7.48□□□□□ -1.21
VPS5YOR069W IQG1Q12280 1495 aa7.47□□□□□ -1.21
VPS5YOR069W RPP0P05317 312 aaKnown RBP7.47□□□□□ -1.21
VPS5YOR069W YIR014WP40570 242 aa7.45□□□□□ -1.22
VPS5YOR069W ABP1P15891 592 aaKnown RBP7.44□□□□□ -1.22
VPS5YOR069W ROX1P25042 368 aa7.42□□□□□ -1.22
VPS5YOR069W TAF5P38129 798 aa7.42□□□□□ -1.22
VPS5YOR069W MMS1Q06211 1407 aa7.42□□□□□ -1.22
VPS5YOR069W PDR12Q02785 1511 aa7.42□□□□□ -1.22
VPS5YOR069W LEO1P38439 464 aa7.41□□□□□ -1.22
VPS5YOR069W KIP3P53086 805 aaKnown RBP7.41□□□□□ -1.22
VPS5YOR069W NTE1Q04958 1679 aa7.41□□□□□ -1.22
VPS5YOR069W YDL144CQ07589 356 aa7.39□□□□□ -1.23
VPS5YOR069W RPO21P04050 1733 aaKnown RBP7.39□□□□□ -1.23
VPS5YOR069W SIS2P36024 562 aa7.39□□□□□ -1.23
VPS5YOR069W LTE1P07866 1435 aa7.39□□□□□ -1.23
VPS5YOR069W BUD3P25558 1636 aa7.39□□□□□ -1.23
VPS5YOR069W YRB30P53107 440 aaPredicted RBP7.38□□□□□ -1.23
VPS5YOR069W DJP1P40564 432 aa7.37□□□□□ -1.23
VPS5YOR069W PCT1P13259 424 aa7.37□□□□□ -1.23
VPS5YOR069W SLN1P39928 1220 aaPredicted RBP7.37□□□□□ -1.23
VPS5YOR069W RTC1Q08281 1341 aa7.36□□□□□ -1.23
VPS5YOR069W SUI2P20459 304 aaKnown RBP7.36□□□□□ -1.23
VPS5YOR069W YSP2Q06681 1438 aa7.36□□□□□ -1.23
VPS5YOR069W YOR093CQ12275 1648 aa7.35□□□□□ -1.23
VPS5YOR069W NUP157P40064 1391 aaKnown RBP7.34□□□□□ -1.23
VPS5YOR069W RAV1P47104 1357 aa7.34□□□□□ -1.23
VPS5YOR069W ESL2P36168 1195 aa7.34□□□□□ -1.23
VPS5YOR069W SCT1P32784 759 aa7.33□□□□□ -1.24
VPS5YOR069W MET10P39692 1035 aa7.33□□□□□ -1.24
VPS5YOR069W RPA190P10964 1664 aaKnown RBP7.32□□□□□ -1.24
VPS5YOR069W VPS24P36095 224 aaKnown RBP7.32□□□□□ -1.24
VPS5YOR069W RTG3P38165 486 aa7.32□□□□□ -1.24
VPS5YOR069W DRS2P39524 1355 aa7.32□□□□□ -1.24
VPS5YOR069W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
VPS5YOR069W IOC4Q04213 475 aa7.31□□□□□ -1.24
VPS5YOR069W SPO14P36126 1683 aa7.3□□□□□ -1.24
VPS5YOR069W MPP10P47083 593 aaKnown RBP7.3□□□□□ -1.24
VPS5YOR069W DNF2Q12675 1612 aa7.3□□□□□ -1.24
VPS5YOR069W MSP1P28737 362 aa7.3□□□□□ -1.24
VPS5YOR069W TRK1P12685 1235 aa7.29□□□□□ -1.24
VPS5YOR069W QCR6P00127 147 aa7.28□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 77.7 ms