RNA–Protein interactions for RNA: YNR017W

TIM23, Transcript of Essential component of the TIM23 complex, yeastyeast

Gene TIM23, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM23YNR017W YRF1-1P0CX20 1796 aa17.51■□□□□ 0.39
TIM23YNR017W YRF1-5P0CX21 1796 aa17.51■□□□□ 0.39
TIM23YNR017W YRF1-8P0CX22 1796 aa17.51■□□□□ 0.39
TIM23YNR017W NUP159P40477 1460 aa17.5■□□□□ 0.39
TIM23YNR017W SNQ2P32568 1501 aaKnown RBP17.46■□□□□ 0.39
TIM23YNR017W MLP2P40457 1679 aa17.42■□□□□ 0.38
TIM23YNR017W STH1P32597 1359 aa17.4■□□□□ 0.38
TIM23YNR017W BNI1P41832 1953 aa17.38■□□□□ 0.37
TIM23YNR017W SNT2P53127 1403 aa17.36■□□□□ 0.37
TIM23YNR017W GEA2P39993 1459 aaKnown RBP17.34■□□□□ 0.37
TIM23YNR017W VPS15P22219 1454 aa17.33■□□□□ 0.37
TIM23YNR017W ULS1Q08562 1619 aa17.31■□□□□ 0.36
TIM23YNR017W SAS10Q12136 610 aaPredicted RBP17.28■□□□□ 0.36
TIM23YNR017W PDR15Q04182 1529 aaKnown RBP17.27■□□□□ 0.36
TIM23YNR017W ITT1Q04638 464 aa17.21■□□□□ 0.35
TIM23YNR017W TAF7Q05021 590 aa17.18■□□□□ 0.34
TIM23YNR017W SPO14P36126 1683 aa17.17■□□□□ 0.34
TIM23YNR017W RTT106P40161 455 aa17.16■□□□□ 0.34
TIM23YNR017W ABP1P15891 592 aaKnown RBP17.15■□□□□ 0.34
TIM23YNR017W PDR12Q02785 1511 aa17.14■□□□□ 0.33
TIM23YNR017W MET10P39692 1035 aa17.13■□□□□ 0.33
TIM23YNR017W IRC20Q06554 1556 aa17.12■□□□□ 0.33
TIM23YNR017W MMS1Q06211 1407 aa17.09■□□□□ 0.33
TIM23YNR017W DRS2P39524 1355 aa17.07■□□□□ 0.32
TIM23YNR017W NUP170P38181 1502 aa17.06■□□□□ 0.32
TIM23YNR017W GDB1Q06625 1536 aa17.06■□□□□ 0.32
TIM23YNR017W YFR006WP43590 535 aa17.04■□□□□ 0.32
TIM23YNR017W IFH1P39520 1085 aa17■□□□□ 0.31
TIM23YNR017W GEA1P47102 1408 aaPredicted RBP16.98■□□□□ 0.31
TIM23YNR017W NUP157P40064 1391 aaKnown RBP16.95■□□□□ 0.3
TIM23YNR017W YBT1P32386 1661 aa16.94■□□□□ 0.3
TIM23YNR017W PDR10P51533 1564 aa16.93■□□□□ 0.3
TIM23YNR017W IQG1Q12280 1495 aa16.92■□□□□ 0.3
TIM23YNR017W TY3B-GQ99315 1547 aa16.91■□□□□ 0.3
TIM23YNR017W DOP1Q03921 1698 aa16.88■□□□□ 0.29
TIM23YNR017W CAT8P39113 1433 aa16.87■□□□□ 0.29
TIM23YNR017W BUD3P25558 1636 aa16.87■□□□□ 0.29
TIM23YNR017W TRM3Q07527 1436 aa16.8■□□□□ 0.28
TIM23YNR017W DNF2Q12675 1612 aa16.8■□□□□ 0.28
TIM23YNR017W ARO1P08566 1588 aaKnown RBP16.76■□□□□ 0.27
TIM23YNR017W CHC1P22137 1653 aaKnown RBP16.72■□□□□ 0.27
TIM23YNR017W SEC7P11075 2009 aaKnown RBP16.69■□□□□ 0.26
TIM23YNR017W CKB1P43639 278 aa16.61■□□□□ 0.25
TIM23YNR017W YSP2Q06681 1438 aa16.61■□□□□ 0.25
TIM23YNR017W SRB8P25648 1427 aa16.53■□□□□ 0.24
TIM23YNR017W BNR1P40450 1375 aa16.51■□□□□ 0.23
TIM23YNR017W YOR093CQ12275 1648 aa16.48■□□□□ 0.23
TIM23YNR017W IKI3Q06706 1349 aaKnown RBP16.48■□□□□ 0.23
TIM23YNR017W DNF3Q12674 1656 aa16.31■□□□□ 0.2
TIM23YNR017W BUD21Q08492 214 aaPredicted RBP16.31■□□□□ 0.2
TIM23YNR017W SSM4P40318 1319 aa16.3■□□□□ 0.2
TIM23YNR017W NUP188P52593 1655 aaKnown RBP16.23■□□□□ 0.19
TIM23YNR017W YAP3P38749 330 aa16.22■□□□□ 0.19
TIM23YNR017W URN1Q06525 465 aaKnown RBP16.19■□□□□ 0.18
TIM23YNR017W GCN2P15442 1659 aa16.18■□□□□ 0.18
TIM23YNR017W VMR1P38735 1592 aa16.16■□□□□ 0.18
TIM23YNR017W PDR5P33302 1511 aaKnown RBP16.07■□□□□ 0.16
TIM23YNR017W IML1P47170 1584 aa16.06■□□□□ 0.16
TIM23YNR017W IPL1P38991 367 aa16.04■□□□□ 0.16
TIM23YNR017W HAP1P0CE41 1502 aa16.04■□□□□ 0.16
TIM23YNR017W MAK10Q02197 733 aa15.98■□□□□ 0.15
TIM23YNR017W TYS1P36421 394 aaKnown RBP15.97■□□□□ 0.15
TIM23YNR017W USO1P25386 1790 aa15.97■□□□□ 0.15
TIM23YNR017W PDR11P40550 1411 aa15.89■□□□□ 0.13
TIM23YNR017W TY1B-NL2Q99337 1749 aaKnown RBP15.83■□□□□ 0.13
TIM23YNR017W PAF1P38351 445 aa15.8■□□□□ 0.12
TIM23YNR017W RAV1P47104 1357 aa15.77■□□□□ 0.12
TIM23YNR017W BFR2Q06631 534 aaKnown RBP15.71■□□□□ 0.11
TIM23YNR017W NOP7P53261 605 aaKnown RBP15.7■□□□□ 0.1
TIM23YNR017W NUP192P47054 1683 aa15.67■□□□□ 0.1
TIM23YNR017W RTC1Q08281 1341 aa15.67■□□□□ 0.1
TIM23YNR017W YMR196WQ04336 1088 aa15.65■□□□□ 0.1
TIM23YNR017W BCK1Q01389 1478 aa15.63■□□□□ 0.09
TIM23YNR017W KRE5P22023 1365 aa15.59■□□□□ 0.09
TIM23YNR017W THI12P42883 340 aa15.57■□□□□ 0.08
TIM23YNR017W THI5P43534 340 aa15.57■□□□□ 0.08
TIM23YNR017W THI11P47183 340 aa15.57■□□□□ 0.08
TIM23YNR017W THI13Q07748 340 aa15.57■□□□□ 0.08
TIM23YNR017W CFT1Q06632 1357 aaKnown RBP15.57■□□□□ 0.08
TIM23YNR017W MRX12P47084 519 aa15.56■□□□□ 0.08
TIM23YNR017W RIA1P53893 1110 aa15.53■□□□□ 0.08
TIM23YNR017W RAD9P14737 1309 aa15.51■□□□□ 0.07
TIM23YNR017W ALD4P46367 519 aaKnown RBP15.51■□□□□ 0.07
TIM23YNR017W CAB1Q04430 367 aa15.48■□□□□ 0.07
TIM23YNR017W ESL2P36168 1195 aa15.43■□□□□ 0.06
TIM23YNR017W YNR029CP53729 429 aaKnown RBP15.43■□□□□ 0.06
TIM23YNR017W TAF5P38129 798 aa15.41■□□□□ 0.06
TIM23YNR017W NAP1P25293 417 aaKnown RBP15.35■□□□□ 0.05
TIM23YNR017W TAF8Q03750 510 aa15.32■□□□□ 0.04
TIM23YNR017W TY3B-IQ7LHG5 1498 aaKnown RBP15.31■□□□□ 0.04
TIM23YNR017W KIP3P53086 805 aaKnown RBP15.22■□□□□ 0.03
TIM23YNR017W SPE2P21182 396 aa15.2■□□□□ 0.02
TIM23YNR017W PTP3P40048 928 aa15.2■□□□□ 0.02
TIM23YNR017W RCM1P53972 490 aa15.18■□□□□ 0.02
TIM23YNR017W YLR419WQ06698 1435 aaKnown RBP15.17■□□□□ 0.02
TIM23YNR017W CPS1P27614 576 aa15.17■□□□□ 0.02
TIM23YNR017W YAH1Q12184 172 aaKnown RBP15.16■□□□□ 0.02
TIM23YNR017W TY4B-HP0C2J7 1802 aa15.15■□□□□ 0.02
TIM23YNR017W TY4B-JP47024 1803 aa15.15■□□□□ 0.02
TIM23YNR017W ORC1P54784 914 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms