RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB2YNL209W TY1B-MR2Q04670 1755 aaKnown RBP6.69□□□□□ -1.34
SSB2YNL209W TY1B-LR1Q12088 1755 aaKnown RBP6.69□□□□□ -1.34
SSB2YNL209W TY1B-NL1Q12112 1755 aa6.69□□□□□ -1.34
SSB2YNL209W TY1B-GR1Q12141 1755 aa6.69□□□□□ -1.34
SSB2YNL209W TY1B-BLQ12490 1755 aa6.69□□□□□ -1.34
SSB2YNL209W SSM4P40318 1319 aa6.69□□□□□ -1.34
SSB2YNL209W SNT2P53127 1403 aa6.69□□□□□ -1.34
SSB2YNL209W TY3B-GQ99315 1547 aa6.67□□□□□ -1.34
SSB2YNL209W RPA190P10964 1664 aaKnown RBP6.67□□□□□ -1.34
SSB2YNL209W RTT106P40161 455 aa6.66□□□□□ -1.34
SSB2YNL209W NTE1Q04958 1679 aa6.64□□□□□ -1.35
SSB2YNL209W NUP170P38181 1502 aa6.64□□□□□ -1.35
SSB2YNL209W RPO21P04050 1733 aaKnown RBP6.61□□□□□ -1.35
SSB2YNL209W GEA2P39993 1459 aaKnown RBP6.61□□□□□ -1.35
SSB2YNL209W NUP159P40477 1460 aa6.61□□□□□ -1.35
SSB2YNL209W URN1Q06525 465 aaKnown RBP6.6□□□□□ -1.35
SSB2YNL209W VPS15P22219 1454 aa6.59□□□□□ -1.35
SSB2YNL209W YBT1P32386 1661 aa6.59□□□□□ -1.35
SSB2YNL209W IRC20Q06554 1556 aa6.59□□□□□ -1.35
SSB2YNL209W GDB1Q06625 1536 aa6.57□□□□□ -1.36
SSB2YNL209W CKB1P43639 278 aa6.55□□□□□ -1.36
SSB2YNL209W CAT8P39113 1433 aa6.54□□□□□ -1.36
SSB2YNL209W MET10P39692 1035 aa6.53□□□□□ -1.36
SSB2YNL209W SPO14P36126 1683 aa6.53□□□□□ -1.36
SSB2YNL209W YRF1-1P0CX20 1796 aa6.53□□□□□ -1.36
SSB2YNL209W YRF1-5P0CX21 1796 aa6.53□□□□□ -1.36
SSB2YNL209W YRF1-8P0CX22 1796 aa6.53□□□□□ -1.36
SSB2YNL209W PDR10P51533 1564 aa6.53□□□□□ -1.36
SSB2YNL209W NUP157P40064 1391 aaKnown RBP6.52□□□□□ -1.37
SSB2YNL209W ARO1P08566 1588 aaKnown RBP6.52□□□□□ -1.37
SSB2YNL209W BUD3P25558 1636 aa6.51□□□□□ -1.37
SSB2YNL209W PDR12Q02785 1511 aa6.5□□□□□ -1.37
SSB2YNL209W SRB8P25648 1427 aa6.49□□□□□ -1.37
SSB2YNL209W MET5P47169 1442 aa6.49□□□□□ -1.37
SSB2YNL209W YSP2Q06681 1438 aa6.44□□□□□ -1.38
SSB2YNL209W BUD21Q08492 214 aaPredicted RBP6.43□□□□□ -1.38
SSB2YNL209W IQG1Q12280 1495 aa6.41□□□□□ -1.38
SSB2YNL209W GCN2P15442 1659 aa6.38□□□□□ -1.39
SSB2YNL209W BNR1P40450 1375 aa6.37□□□□□ -1.39
SSB2YNL209W MMS1Q06211 1407 aa6.37□□□□□ -1.39
SSB2YNL209W POL5P39985 1022 aaKnown RBP6.36□□□□□ -1.39
SSB2YNL209W LTE1P07866 1435 aa6.35□□□□□ -1.39
SSB2YNL209W NOP7P53261 605 aaKnown RBP6.34□□□□□ -1.39
SSB2YNL209W EBP2P36049 427 aaKnown RBP6.32□□□□□ -1.4
SSB2YNL209W ORC1P54784 914 aaPredicted RBP6.32□□□□□ -1.4
SSB2YNL209W DRS2P39524 1355 aa6.32□□□□□ -1.4
SSB2YNL209W NSR1P27476 414 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
SSB2YNL209W SIS2P36024 562 aa6.32□□□□□ -1.4
SSB2YNL209W YOR093CQ12275 1648 aa6.31□□□□□ -1.4
SSB2YNL209W SEC7P11075 2009 aaKnown RBP6.3□□□□□ -1.4
SSB2YNL209W DOP1Q03921 1698 aa6.3□□□□□ -1.4
SSB2YNL209W PAF1P38351 445 aa6.29□□□□□ -1.4
SSB2YNL209W PDR11P40550 1411 aa6.29□□□□□ -1.4
SSB2YNL209W ITT1Q04638 464 aa6.29□□□□□ -1.4
SSB2YNL209W CHC1P22137 1653 aaKnown RBP6.29□□□□□ -1.4
SSB2YNL209W PDR5P33302 1511 aaKnown RBP6.28□□□□□ -1.4
SSB2YNL209W VMR1P38735 1592 aa6.28□□□□□ -1.4
SSB2YNL209W TRM3Q07527 1436 aa6.27□□□□□ -1.41
SSB2YNL209W SPT7P35177 1332 aa6.27□□□□□ -1.41
SSB2YNL209W CAB3P36076 571 aa6.25□□□□□ -1.41
SSB2YNL209W TFA1P36100 482 aa6.24□□□□□ -1.41
SSB2YNL209W RAV1P47104 1357 aa6.24□□□□□ -1.41
SSB2YNL209W BNI1P41832 1953 aa6.24□□□□□ -1.41
SSB2YNL209W IML1P47170 1584 aa6.23□□□□□ -1.41
SSB2YNL209W LEU3P08638 886 aa6.23□□□□□ -1.41
SSB2YNL209W TAF5P38129 798 aa6.23□□□□□ -1.41
SSB2YNL209W NOP2P40991 618 aaKnown RBP6.23□□□□□ -1.41
SSB2YNL209W NUP188P52593 1655 aaKnown RBP6.23□□□□□ -1.41
SSB2YNL209W RTC1Q08281 1341 aa6.22□□□□□ -1.41
SSB2YNL209W DNF2Q12675 1612 aa6.22□□□□□ -1.41
SSB2YNL209W TYS1P36421 394 aaKnown RBP6.21□□□□□ -1.42
SSB2YNL209W SEC3P33332 1336 aaKnown RBP6.18□□□□□ -1.42
SSB2YNL209W ENP1P38333 483 aaKnown RBP6.18□□□□□ -1.42
SSB2YNL209W PSD2P53037 1138 aaKnown RBP6.18□□□□□ -1.42
SSB2YNL209W KIP3P53086 805 aaKnown RBP6.18□□□□□ -1.42
SSB2YNL209W NUP192P47054 1683 aa6.18□□□□□ -1.42
SSB2YNL209W MHP1P43638 1398 aa6.17□□□□□ -1.42
SSB2YNL209W TY3B-IQ7LHG5 1498 aaKnown RBP6.17□□□□□ -1.42
SSB2YNL209W AVT3P36062 692 aa6.17□□□□□ -1.42
SSB2YNL209W IPL1P38991 367 aa6.17□□□□□ -1.42
SSB2YNL209W YFR016CP43597 1233 aaKnown RBP6.16□□□□□ -1.42
SSB2YNL209W YLR419WQ06698 1435 aaKnown RBP6.15□□□□□ -1.42
SSB2YNL209W ESL2P36168 1195 aa6.15□□□□□ -1.43
SSB2YNL209W NST1P53935 1240 aa6.13□□□□□ -1.43
SSB2YNL209W RAD9P14737 1309 aa6.13□□□□□ -1.43
SSB2YNL209W PDS5Q04264 1277 aa6.13□□□□□ -1.43
SSB2YNL209W YAP3P38749 330 aa6.12□□□□□ -1.43
SSB2YNL209W SPE2P21182 396 aa6.11□□□□□ -1.43
SSB2YNL209W TAF8Q03750 510 aa6.11□□□□□ -1.43
SSB2YNL209W CAB1Q04430 367 aa6.11□□□□□ -1.43
SSB2YNL209W ALD4P46367 519 aaKnown RBP6.08□□□□□ -1.44
SSB2YNL209W BCK1Q01389 1478 aa6.08□□□□□ -1.44
SSB2YNL209W PRS1P32895 427 aaKnown RBP6.06□□□□□ -1.44
SSB2YNL209W RTG3P38165 486 aa6.06□□□□□ -1.44
SSB2YNL209W CHZ1P40019 153 aaPredicted RBP6.06□□□□□ -1.44
SSB2YNL209W KRE5P22023 1365 aa6.06□□□□□ -1.44
SSB2YNL209W DNF3Q12674 1656 aa6.04□□□□□ -1.44
SSB2YNL209W MRX12P47084 519 aa6.03□□□□□ -1.44
SSB2YNL209W RIA1P53893 1110 aa6.02□□□□□ -1.45
SSB2YNL209W ABP1P15891 592 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms