RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C TY1B-ER2Q03619 1755 aa9.99□□□□□ -0.81
SCS7YMR272C TY1B-MR1Q04214 1755 aa9.99□□□□□ -0.81
SCS7YMR272C TY1B-MR2Q04670 1755 aaKnown RBP9.99□□□□□ -0.81
SCS7YMR272C TY1B-LR1Q12088 1755 aaKnown RBP9.99□□□□□ -0.81
SCS7YMR272C TY1B-NL1Q12112 1755 aa9.99□□□□□ -0.81
SCS7YMR272C TY1B-GR1Q12141 1755 aa9.99□□□□□ -0.81
SCS7YMR272C TY1B-BLQ12490 1755 aa9.99□□□□□ -0.81
SCS7YMR272C MET10P39692 1035 aa9.98□□□□□ -0.81
SCS7YMR272C MMS1Q06211 1407 aa9.97□□□□□ -0.81
SCS7YMR272C RPO21P04050 1733 aaKnown RBP9.96□□□□□ -0.81
SCS7YMR272C TAF7Q05021 590 aa9.96□□□□□ -0.82
SCS7YMR272C YRF1-1P0CX20 1796 aa9.96□□□□□ -0.82
SCS7YMR272C YRF1-5P0CX21 1796 aa9.96□□□□□ -0.82
SCS7YMR272C YRF1-8P0CX22 1796 aa9.96□□□□□ -0.82
SCS7YMR272C BNI1P41832 1953 aa9.95□□□□□ -0.82
SCS7YMR272C SNT2P53127 1403 aa9.9□□□□□ -0.83
SCS7YMR272C NUP170P38181 1502 aa9.87□□□□□ -0.83
SCS7YMR272C SNQ2P32568 1501 aaKnown RBP9.87□□□□□ -0.83
SCS7YMR272C MLP2P40457 1679 aa9.82□□□□□ -0.84
SCS7YMR272C ULS1Q08562 1619 aa9.82□□□□□ -0.84
SCS7YMR272C SAS10Q12136 610 aaPredicted RBP9.81□□□□□ -0.84
SCS7YMR272C BUD3P25558 1636 aa9.8□□□□□ -0.84
SCS7YMR272C PDR12Q02785 1511 aa9.77□□□□□ -0.84
SCS7YMR272C TRM3Q07527 1436 aa9.77□□□□□ -0.85
SCS7YMR272C SPO14P36126 1683 aa9.77□□□□□ -0.85
SCS7YMR272C YFR006WP43590 535 aa9.74□□□□□ -0.85
SCS7YMR272C PDR10P51533 1564 aa9.74□□□□□ -0.85
SCS7YMR272C DNF2Q12675 1612 aa9.74□□□□□ -0.85
SCS7YMR272C IQG1Q12280 1495 aa9.73□□□□□ -0.85
SCS7YMR272C NUP157P40064 1391 aaKnown RBP9.72□□□□□ -0.85
SCS7YMR272C DOP1Q03921 1698 aa9.71□□□□□ -0.85
SCS7YMR272C IRC20Q06554 1556 aa9.7□□□□□ -0.86
SCS7YMR272C IFH1P39520 1085 aa9.69□□□□□ -0.86
SCS7YMR272C GDB1Q06625 1536 aa9.68□□□□□ -0.86
SCS7YMR272C PDR15Q04182 1529 aaKnown RBP9.67□□□□□ -0.86
SCS7YMR272C CAT8P39113 1433 aa9.64□□□□□ -0.87
SCS7YMR272C URN1Q06525 465 aaKnown RBP9.63□□□□□ -0.87
SCS7YMR272C CKB1P43639 278 aa9.56□□□□□ -0.88
SCS7YMR272C SEC7P11075 2009 aaKnown RBP9.55□□□□□ -0.88
SCS7YMR272C GEA1P47102 1408 aaPredicted RBP9.55□□□□□ -0.88
SCS7YMR272C YOR093CQ12275 1648 aa9.54□□□□□ -0.88
SCS7YMR272C CHC1P22137 1653 aaKnown RBP9.53□□□□□ -0.88
SCS7YMR272C YAP3P38749 330 aa9.52□□□□□ -0.89
SCS7YMR272C BNR1P40450 1375 aa9.5□□□□□ -0.89
SCS7YMR272C ARO1P08566 1588 aaKnown RBP9.44□□□□□ -0.9
SCS7YMR272C YBT1P32386 1661 aa9.42□□□□□ -0.9
SCS7YMR272C BUD21Q08492 214 aaPredicted RBP9.41□□□□□ -0.9
SCS7YMR272C DNF3Q12674 1656 aa9.41□□□□□ -0.9
SCS7YMR272C SRB8P25648 1427 aa9.39□□□□□ -0.91
SCS7YMR272C MAK10Q02197 733 aa9.39□□□□□ -0.91
SCS7YMR272C YSP2Q06681 1438 aa9.39□□□□□ -0.91
SCS7YMR272C TY3B-GQ99315 1547 aa9.38□□□□□ -0.91
SCS7YMR272C YMR196WQ04336 1088 aa9.31□□□□□ -0.92
SCS7YMR272C IPL1P38991 367 aa9.29□□□□□ -0.92
SCS7YMR272C HAP1P0CE41 1502 aa9.26□□□□□ -0.93
SCS7YMR272C TY1B-NL2Q99337 1749 aaKnown RBP9.23□□□□□ -0.93
SCS7YMR272C IKI3Q06706 1349 aaKnown RBP9.2□□□□□ -0.94
SCS7YMR272C NUP188P52593 1655 aaKnown RBP9.2□□□□□ -0.94
SCS7YMR272C USO1P25386 1790 aa9.19□□□□□ -0.94
SCS7YMR272C PAF1P38351 445 aa9.15□□□□□ -0.94
SCS7YMR272C TYS1P36421 394 aaKnown RBP9.12□□□□□ -0.95
SCS7YMR272C THI12P42883 340 aa9.12□□□□□ -0.95
SCS7YMR272C THI5P43534 340 aa9.12□□□□□ -0.95
SCS7YMR272C MRX12P47084 519 aa9.12□□□□□ -0.95
SCS7YMR272C THI11P47183 340 aa9.12□□□□□ -0.95
SCS7YMR272C THI13Q07748 340 aa9.12□□□□□ -0.95
SCS7YMR272C IML1P47170 1584 aa9.12□□□□□ -0.95
SCS7YMR272C VMR1P38735 1592 aa9.1□□□□□ -0.95
SCS7YMR272C GCN2P15442 1659 aa9.05□□□□□ -0.96
SCS7YMR272C NAP1P25293 417 aaKnown RBP9.05□□□□□ -0.96
SCS7YMR272C PDR5P33302 1511 aaKnown RBP9.04□□□□□ -0.96
SCS7YMR272C RIA1P53893 1110 aa9□□□□□ -0.97
SCS7YMR272C NOP7P53261 605 aaKnown RBP8.99□□□□□ -0.97
SCS7YMR272C YAH1Q12184 172 aaKnown RBP8.99□□□□□ -0.97
SCS7YMR272C BFR2Q06631 534 aaKnown RBP8.97□□□□□ -0.97
SCS7YMR272C SSM4P40318 1319 aa8.96□□□□□ -0.98
SCS7YMR272C CFT1Q06632 1357 aaKnown RBP8.95□□□□□ -0.98
SCS7YMR272C SCT1P32784 759 aa8.93□□□□□ -0.98
SCS7YMR272C YNR029CP53729 429 aaKnown RBP8.93□□□□□ -0.98
SCS7YMR272C KRE5P22023 1365 aa8.92□□□□□ -0.98
SCS7YMR272C RAV1P47104 1357 aa8.91□□□□□ -0.98
SCS7YMR272C ALD4P46367 519 aaKnown RBP8.91□□□□□ -0.98
SCS7YMR272C BCK1Q01389 1478 aa8.89□□□□□ -0.99
SCS7YMR272C RTC1Q08281 1341 aa8.88□□□□□ -0.99
SCS7YMR272C PTP3P40048 928 aa8.87□□□□□ -0.99
SCS7YMR272C ESL2P36168 1195 aa8.86□□□□□ -0.99
SCS7YMR272C CAB1Q04430 367 aa8.86□□□□□ -0.99
SCS7YMR272C YIL055CP40523 627 aaKnown RBP8.85□□□□□ -0.99
SCS7YMR272C PDR11P40550 1411 aa8.84□□□□□ -0.99
SCS7YMR272C NUP192P47054 1683 aa8.82□□□□□ -1
SCS7YMR272C PRI1P10363 409 aa8.82□□□□□ -1
SCS7YMR272C GLN1P32288 370 aaKnown RBP8.8□□□□□ -1
SCS7YMR272C TAF5P38129 798 aa8.8□□□□□ -1
SCS7YMR272C APP1P53933 587 aa8.8□□□□□ -1
SCS7YMR272C ENT1Q12518 454 aa8.79□□□□□ -1
SCS7YMR272C RAD9P14737 1309 aa8.79□□□□□ -1
SCS7YMR272C LEU3P08638 886 aa8.75□□□□□ -1.01
SCS7YMR272C YMR074CQ04773 145 aa8.75□□□□□ -1.01
SCS7YMR272C IMH1Q06704 911 aaKnown RBP8.75□□□□□ -1.01
SCS7YMR272C REB1P21538 810 aa8.74□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms