RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C VHR2P40041 505 aa11.39□□□□□ -0.59
ATG17YLR423C ATF2P53296 535 aa11.39□□□□□ -0.59
ATG17YLR423C GUT1P32190 709 aa11.35□□□□□ -0.59
ATG17YLR423C KIC1P38692 1080 aa11.35□□□□□ -0.59
ATG17YLR423C RLF2Q12495 606 aa11.35□□□□□ -0.59
ATG17YLR423C GTT3P39996 337 aa11.32□□□□□ -0.6
ATG17YLR423C GYP5Q12344 894 aa11.28□□□□□ -0.6
ATG17YLR423C UBP14P38237 781 aaKnown RBP11.27□□□□□ -0.61
ATG17YLR423C YDR090CQ03193 310 aa11.26□□□□□ -0.61
ATG17YLR423C YLR326WQ06170 240 aaKnown RBP11.26□□□□□ -0.61
ATG17YLR423C SAM3Q08986 587 aa11.26□□□□□ -0.61
ATG17YLR423C YGR273CP53329 174 aa11.24□□□□□ -0.61
ATG17YLR423C RAD54P32863 898 aa11.23□□□□□ -0.61
ATG17YLR423C GUA1P38625 525 aaKnown RBP11.23□□□□□ -0.61
ATG17YLR423C KEX1P09620 729 aa11.18□□□□□ -0.62
ATG17YLR423C DCW1P36091 449 aa11.18□□□□□ -0.62
ATG17YLR423C ABP1P15891 592 aaKnown RBP11.17□□□□□ -0.62
ATG17YLR423C MST1P07236 462 aa11.16□□□□□ -0.62
ATG17YLR423C PSE1P32337 1089 aaKnown RBP11.14□□□□□ -0.63
ATG17YLR423C PCS60P38137 543 aaKnown RBP RIP-Chip data11.14□□□□□ -0.63not detected
ATG17YLR423C HPC2Q01448 625 aa11.13□□□□□ -0.63
ATG17YLR423C YOL036WQ08206 761 aa11.13□□□□□ -0.63
ATG17YLR423C SOL3P38858 249 aa11.12□□□□□ -0.63
ATG17YLR423C SET4P42948 560 aa11.12□□□□□ -0.63
ATG17YLR423C HTA1P04911 132 aaKnown RBP11.1□□□□□ -0.63
ATG17YLR423C HTA2P04912 132 aa11.1□□□□□ -0.63
ATG17YLR423C BRL1P38770 471 aa11.09□□□□□ -0.63
ATG17YLR423C TFB3Q03290 321 aa11.07□□□□□ -0.64
ATG17YLR423C SSA2P10592 639 aaKnown RBP11.06□□□□□ -0.64
ATG17YLR423C CSN12P47130 423 aa11.04□□□□□ -0.64
ATG17YLR423C TEA1P47988 759 aa11.04□□□□□ -0.64
ATG17YLR423C ORC6P38826 435 aa11.01□□□□□ -0.65
ATG17YLR423C MSB4Q12317 492 aa11.01□□□□□ -0.65
ATG17YLR423C AI4P03878 556 aa11□□□□□ -0.65
ATG17YLR423C MPH3P0CE00 602 aa11□□□□□ -0.65
ATG17YLR423C WSC3Q12215 556 aa11□□□□□ -0.65
ATG17YLR423C RPP1BP10622 106 aaKnown RBP10.99□□□□□ -0.65
ATG17YLR423C NST1P53935 1240 aa10.98□□□□□ -0.65
ATG17YLR423C CLB5P30283 435 aa10.95□□□□□ -0.66
ATG17YLR423C YEL023CP39992 682 aa10.94□□□□□ -0.66
ATG17YLR423C PKC1P24583 1151 aa10.93□□□□□ -0.66
ATG17YLR423C ILV3P39522 585 aaKnown RBP10.93□□□□□ -0.66
ATG17YLR423C RGR1P19263 1082 aa10.92□□□□□ -0.66
ATG17YLR423C EAP1P36041 632 aaKnown RBP10.92□□□□□ -0.66
ATG17YLR423C DAN4P47179 1161 aa10.91□□□□□ -0.66
ATG17YLR423C MVP1P40959 511 aaKnown RBP10.9□□□□□ -0.66
ATG17YLR423C SLI15P38283 698 aa10.89□□□□□ -0.67
ATG17YLR423C YMR196WQ04336 1088 aa10.89□□□□□ -0.67
ATG17YLR423C YJL007CP47080 104 aa10.88□□□□□ -0.67
ATG17YLR423C CSC1Q06538 782 aa10.88□□□□□ -0.67
ATG17YLR423C TYW1Q08960 810 aaKnown RBP10.88□□□□□ -0.67
ATG17YLR423C PEX21P50091 288 aa10.86□□□□□ -0.67
ATG17YLR423C PTC4P38089 393 aa10.85□□□□□ -0.67
ATG17YLR423C TRP5P00931 707 aaKnown RBP10.84□□□□□ -0.67
ATG17YLR423C YPR109WQ06104 294 aa10.84□□□□□ -0.67
ATG17YLR423C GLN1P32288 370 aaKnown RBP10.83□□□□□ -0.68
ATG17YLR423C KTR1P27810 393 aaKnown RBP10.82□□□□□ -0.68
ATG17YLR423C BIM1P40013 344 aa10.82□□□□□ -0.68
ATG17YLR423C RPL34BP40525 121 aaKnown RBP10.82□□□□□ -0.68
ATG17YLR423C YBL036CP38197 257 aa10.81□□□□□ -0.68
ATG17YLR423C NIS1P53939 407 aa10.81□□□□□ -0.68
ATG17YLR423C CDC73Q06697 393 aa10.81□□□□□ -0.68
ATG17YLR423C GAP1P19145 602 aaPredicted RBP10.8□□□□□ -0.68
ATG17YLR423C FPK1P53739 893 aa10.8□□□□□ -0.68
ATG17YLR423C JIP4Q03361 876 aa10.8□□□□□ -0.68
ATG17YLR423C TFB4Q12004 338 aa10.8□□□□□ -0.68
ATG17YLR423C MMP1Q12372 583 aa10.79□□□□□ -0.68
ATG17YLR423C YBL029C-AQ3E756 94 aa10.79□□□□□ -0.68
ATG17YLR423C HST2P53686 357 aa10.78□□□□□ -0.68
ATG17YLR423C ULI1P43604 169 aa10.77□□□□□ -0.69
ATG17YLR423C PKH3Q03306 898 aaPredicted RBP10.77□□□□□ -0.69
ATG17YLR423C ATG32P40458 529 aa10.76□□□□□ -0.69
ATG17YLR423C VNX1P42839 908 aa10.74□□□□□ -0.69
ATG17YLR423C TUM1Q08686 304 aaKnown RBP10.74□□□□□ -0.69
ATG17YLR423C ESS1P22696 170 aa10.73□□□□□ -0.69
ATG17YLR423C TIF11P38912 153 aaKnown RBP10.73□□□□□ -0.69
ATG17YLR423C SPP1Q03012 353 aa10.73□□□□□ -0.69
ATG17YLR423C SCJ1P25303 377 aa10.72□□□□□ -0.69
ATG17YLR423C RAD59Q12223 238 aa10.71□□□□□ -0.69
ATG17YLR423C DPL1Q05567 589 aa10.7□□□□□ -0.7
ATG17YLR423C PML39Q03760 334 aa10.69□□□□□ -0.7
ATG17YLR423C TIF1P10081 395 aaKnown RBP10.68□□□□□ -0.7
ATG17YLR423C ARG8P18544 423 aa10.68□□□□□ -0.7
ATG17YLR423C PEX29Q03370 554 aa10.68□□□□□ -0.7
ATG17YLR423C UBP9P39967 754 aa10.67□□□□□ -0.7
ATG17YLR423C YRR1Q12172 810 aa10.67□□□□□ -0.7
ATG17YLR423C CSE4P36012 229 aa10.66□□□□□ -0.7
ATG17YLR423C MID1P41821 548 aa10.66□□□□□ -0.7
ATG17YLR423C SSA1P10591 642 aaKnown RBP10.65□□□□□ -0.7
ATG17YLR423C SIT4P20604 311 aa10.65□□□□□ -0.7
ATG17YLR423C SSA4P22202 642 aaKnown RBP10.65□□□□□ -0.7
ATG17YLR423C YJU3P28321 313 aa10.65□□□□□ -0.7
ATG17YLR423C YNL035CP53962 389 aaKnown RBP10.65□□□□□ -0.7
ATG17YLR423C BIO2P32451 375 aa10.64□□□□□ -0.71
ATG17YLR423C SUB2Q07478 446 aaKnown RBP10.64□□□□□ -0.71
ATG17YLR423C MPC54Q08550 464 aa10.64□□□□□ -0.71
ATG17YLR423C YPR204WQ08995 1032 aa10.64□□□□□ -0.71
ATG17YLR423C SLY41P22215 453 aa10.63□□□□□ -0.71
ATG17YLR423C ERG12P07277 443 aa10.62□□□□□ -0.71
ATG17YLR423C RTG2P32608 588 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 101.7 ms