RNA–Protein interactions for RNA: YLR307W

CDA1, Transcript of Chitin deacetylase, yeastyeast

Gene CDA1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDA1YLR307W TY1B-ER2Q03619 1755 aa10.85□□□□□ -0.67
CDA1YLR307W TY1B-MR1Q04214 1755 aa10.85□□□□□ -0.67
CDA1YLR307W TY1B-MR2Q04670 1755 aaKnown RBP10.85□□□□□ -0.67
CDA1YLR307W TY1B-LR1Q12088 1755 aaKnown RBP10.85□□□□□ -0.67
CDA1YLR307W TY1B-NL1Q12112 1755 aa10.85□□□□□ -0.67
CDA1YLR307W TY1B-GR1Q12141 1755 aa10.85□□□□□ -0.67
CDA1YLR307W TY1B-BLQ12490 1755 aa10.85□□□□□ -0.67
CDA1YLR307W SSM4P40318 1319 aa10.83□□□□□ -0.68
CDA1YLR307W TY3B-GQ99315 1547 aa10.81□□□□□ -0.68
CDA1YLR307W NTE1Q04958 1679 aa10.8□□□□□ -0.68
CDA1YLR307W PRI1P10363 409 aa10.79□□□□□ -0.68
CDA1YLR307W RPA190P10964 1664 aaKnown RBP10.79□□□□□ -0.68
CDA1YLR307W GEA2P39993 1459 aaKnown RBP10.77□□□□□ -0.69
CDA1YLR307W RPO21P04050 1733 aaKnown RBP10.76□□□□□ -0.69
CDA1YLR307W DNF1P32660 1571 aa10.76□□□□□ -0.69
CDA1YLR307W IRC20Q06554 1556 aa10.75□□□□□ -0.69
CDA1YLR307W YBT1P32386 1661 aa10.75□□□□□ -0.69
CDA1YLR307W RTT106P40161 455 aa10.74□□□□□ -0.69
CDA1YLR307W VPS15P22219 1454 aa10.71□□□□□ -0.69
CDA1YLR307W CAT8P39113 1433 aa10.71□□□□□ -0.69
CDA1YLR307W AAD16Q02895 342 aa10.71□□□□□ -0.69
CDA1YLR307W NUP159P40477 1460 aa10.67□□□□□ -0.7
CDA1YLR307W DIP2Q12220 943 aaPredicted RBP10.63□□□□□ -0.71
CDA1YLR307W ISW2Q08773 1120 aa10.61□□□□□ -0.71
CDA1YLR307W RPG1P38249 964 aaKnown RBP10.6□□□□□ -0.71
CDA1YLR307W ARO1P08566 1588 aaKnown RBP10.6□□□□□ -0.71
CDA1YLR307W PDR10P51533 1564 aa10.59□□□□□ -0.71
CDA1YLR307W SRB8P25648 1427 aa10.58□□□□□ -0.72
CDA1YLR307W PDR12Q02785 1511 aa10.58□□□□□ -0.72
CDA1YLR307W GDB1Q06625 1536 aa10.58□□□□□ -0.72
CDA1YLR307W SPO14P36126 1683 aa10.56□□□□□ -0.72
CDA1YLR307W MET10P39692 1035 aa10.54□□□□□ -0.72
CDA1YLR307W YRF1-1P0CX20 1796 aa10.53□□□□□ -0.72
CDA1YLR307W YRF1-5P0CX21 1796 aa10.53□□□□□ -0.72
CDA1YLR307W YRF1-8P0CX22 1796 aa10.53□□□□□ -0.72
CDA1YLR307W NUP157P40064 1391 aaKnown RBP10.52□□□□□ -0.72
CDA1YLR307W MET5P47169 1442 aa10.52□□□□□ -0.73
CDA1YLR307W CKB1P43639 278 aa10.51□□□□□ -0.73
CDA1YLR307W GCN2P15442 1659 aa10.49□□□□□ -0.73
CDA1YLR307W BUD3P25558 1636 aa10.46□□□□□ -0.74
CDA1YLR307W MMS1Q06211 1407 aa10.44□□□□□ -0.74
CDA1YLR307W POL5P39985 1022 aaKnown RBP10.44□□□□□ -0.74
CDA1YLR307W BUD21Q08492 214 aaPredicted RBP10.42□□□□□ -0.74
CDA1YLR307W IQG1Q12280 1495 aa10.42□□□□□ -0.74
CDA1YLR307W YSP2Q06681 1438 aa10.41□□□□□ -0.74
CDA1YLR307W NOP7P53261 605 aaKnown RBP10.35□□□□□ -0.75
CDA1YLR307W TSR3Q12094 313 aaKnown RBP10.33□□□□□ -0.76
CDA1YLR307W PDR5P33302 1511 aaKnown RBP10.33□□□□□ -0.76
CDA1YLR307W YOR093CQ12275 1648 aa10.32□□□□□ -0.76
CDA1YLR307W BNR1P40450 1375 aa10.31□□□□□ -0.76
CDA1YLR307W NSR1P27476 414 aaKnown RBP RIP-Chip data10.3□□□□□ -0.76not detected
CDA1YLR307W PAF1P38351 445 aa10.28□□□□□ -0.76
CDA1YLR307W CHC1P22137 1653 aaKnown RBP10.28□□□□□ -0.76
CDA1YLR307W YCK3P39962 524 aa10.27□□□□□ -0.77
CDA1YLR307W SEC3P33332 1336 aaKnown RBP10.26□□□□□ -0.77
CDA1YLR307W LTE1P07866 1435 aa10.25□□□□□ -0.77
CDA1YLR307W TRM3Q07527 1436 aa10.24□□□□□ -0.77
CDA1YLR307W SEC7P11075 2009 aaKnown RBP10.24□□□□□ -0.77
CDA1YLR307W DOP1Q03921 1698 aa10.24□□□□□ -0.77
CDA1YLR307W ENP1P38333 483 aaKnown RBP10.22□□□□□ -0.77
CDA1YLR307W BFR2Q06631 534 aaKnown RBP10.22□□□□□ -0.77
CDA1YLR307W AVT3P36062 692 aa10.21□□□□□ -0.77
CDA1YLR307W SPT7P35177 1332 aa10.18□□□□□ -0.78
CDA1YLR307W VMR1P38735 1592 aa10.18□□□□□ -0.78
CDA1YLR307W DRS2P39524 1355 aa10.17□□□□□ -0.78
CDA1YLR307W RAV1P47104 1357 aa10.17□□□□□ -0.78
CDA1YLR307W NUP188P52593 1655 aaKnown RBP10.15□□□□□ -0.78
CDA1YLR307W MHP1P43638 1398 aa10.15□□□□□ -0.78
CDA1YLR307W IML1P47170 1584 aa10.14□□□□□ -0.79
CDA1YLR307W TY3B-IQ7LHG5 1498 aaKnown RBP10.13□□□□□ -0.79
CDA1YLR307W PDR11P40550 1411 aa10.13□□□□□ -0.79
CDA1YLR307W RTC1Q08281 1341 aa10.12□□□□□ -0.79
CDA1YLR307W NOP2P40991 618 aaKnown RBP10.1□□□□□ -0.79
CDA1YLR307W DNF2Q12675 1612 aa10.09□□□□□ -0.79
CDA1YLR307W ORC1P54784 914 aaPredicted RBP10.09□□□□□ -0.79
CDA1YLR307W HAA1Q12753 694 aaKnown RBP10.07□□□□□ -0.8
CDA1YLR307W TAF5P38129 798 aa10.05□□□□□ -0.8
CDA1YLR307W ESL2P36168 1195 aa10.03□□□□□ -0.8
CDA1YLR307W YLR419WQ06698 1435 aaKnown RBP10.03□□□□□ -0.8
CDA1YLR307W NUP192P47054 1683 aa10.02□□□□□ -0.8
CDA1YLR307W LEU3P08638 886 aa10.02□□□□□ -0.81
CDA1YLR307W PSD2P53037 1138 aaKnown RBP10.01□□□□□ -0.81
CDA1YLR307W KIP3P53086 805 aaKnown RBP9.99□□□□□ -0.81
CDA1YLR307W BNI1P41832 1953 aa9.99□□□□□ -0.81
CDA1YLR307W ITT1Q04638 464 aa9.98□□□□□ -0.81
CDA1YLR307W SCT1P32784 759 aa9.97□□□□□ -0.81
CDA1YLR307W PDS5Q04264 1277 aa9.97□□□□□ -0.81
CDA1YLR307W URN1Q06525 465 aaKnown RBP9.97□□□□□ -0.81
CDA1YLR307W RPL17AP05740 184 aaKnown RBP9.94□□□□□ -0.82
CDA1YLR307W IPL1P38991 367 aa9.94□□□□□ -0.82
CDA1YLR307W RPL17BP46990 184 aaKnown RBP9.94□□□□□ -0.82
CDA1YLR307W PRS1P32895 427 aaKnown RBP9.93□□□□□ -0.82
CDA1YLR307W TYS1P36421 394 aaKnown RBP9.93□□□□□ -0.82
CDA1YLR307W SPE2P21182 396 aa9.91□□□□□ -0.82
CDA1YLR307W BCK1Q01389 1478 aa9.89□□□□□ -0.83
CDA1YLR307W REB1P21538 810 aa9.87□□□□□ -0.83
CDA1YLR307W RAD9P14737 1309 aa9.86□□□□□ -0.83
CDA1YLR307W YAP3P38749 330 aa9.85□□□□□ -0.83
CDA1YLR307W ALD4P46367 519 aaKnown RBP9.85□□□□□ -0.83
CDA1YLR307W NST1P53935 1240 aa9.85□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms