RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeastyeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCS4YLR272C TFB3Q03290 321 aa2.63□□□□□ -1.99
YCS4YLR272C BDF1P35817 686 aa2.63□□□□□ -1.99
YCS4YLR272C PEX21P50091 288 aa2.63□□□□□ -1.99
YCS4YLR272C ARG8P18544 423 aa2.62□□□□□ -1.99
YCS4YLR272C CPS1P27614 576 aa2.62□□□□□ -1.99
YCS4YLR272C GUA1P38625 525 aaKnown RBP2.62□□□□□ -1.99
YCS4YLR272C REF2P42073 533 aaPredicted RBP2.62□□□□□ -1.99
YCS4YLR272C SET4P42948 560 aa2.62□□□□□ -1.99
YCS4YLR272C YOR238WQ08634 303 aa2.62□□□□□ -1.99
YCS4YLR272C PKC1P24583 1151 aa2.61□□□□□ -1.99
YCS4YLR272C PKH3Q03306 898 aaPredicted RBP2.6□□□□□ -1.99
YCS4YLR272C ERG12P07277 443 aa2.6□□□□□ -1.99
YCS4YLR272C CSN12P47130 423 aa2.6□□□□□ -1.99
YCS4YLR272C RAD54P32863 898 aa2.6□□□□□ -1.99
YCS4YLR272C PSD2P53037 1138 aaKnown RBP2.6□□□□□ -1.99
YCS4YLR272C YNL108CP53929 270 aa2.6□□□□□ -1.99
YCS4YLR272C SPP1Q03012 353 aa2.59□□□□□ -1.99
YCS4YLR272C NOP7P53261 605 aaKnown RBP2.58□□□□□ -2
YCS4YLR272C BIM1P40013 344 aa2.58□□□□□ -2
YCS4YLR272C YML020WQ03722 664 aa2.58□□□□□ -2
YCS4YLR272C SCJ1P25303 377 aa2.56□□□□□ -2
YCS4YLR272C RTG2P32608 588 aaKnown RBP2.56□□□□□ -2
YCS4YLR272C MET10P39692 1035 aa2.56□□□□□ -2
YCS4YLR272C GRE2Q12068 342 aaKnown RBP2.56□□□□□ -2
YCS4YLR272C ESS1P22696 170 aa2.56□□□□□ -2
YCS4YLR272C TBF1Q02457 562 aa2.56□□□□□ -2
YCS4YLR272C SLX8P40072 274 aa2.56□□□□□ -2
YCS4YLR272C ELP4Q02884 456 aaKnown RBP2.56□□□□□ -2
YCS4YLR272C ATG32P40458 529 aa2.55□□□□□ -2
YCS4YLR272C ENV9Q08651 330 aa2.55□□□□□ -2
YCS4YLR272C HAT1Q12341 374 aa2.55□□□□□ -2
YCS4YLR272C EDS1P38073 919 aa2.54□□□□□ -2
YCS4YLR272C YNR021WP53723 404 aaKnown RBP2.54□□□□□ -2
YCS4YLR272C SAS10Q12136 610 aaPredicted RBP2.54□□□□□ -2
YCS4YLR272C MAK11P20484 414 aaKnown RBP2.54□□□□□ -2
YCS4YLR272C GYP5Q12344 894 aa2.54□□□□□ -2
YCS4YLR272C SSA4P22202 642 aaKnown RBP2.54□□□□□ -2
YCS4YLR272C SLD2P34252 453 aa2.54□□□□□ -2
YCS4YLR272C STS1P38637 319 aa2.54□□□□□ -2
YCS4YLR272C SSA1P10591 642 aaKnown RBP2.53□□□□□ -2
YCS4YLR272C TEA1P47988 759 aa2.53□□□□□ -2
YCS4YLR272C AIM44Q99299 758 aa2.53□□□□□ -2
YCS4YLR272C PTC3P34221 468 aaKnown RBP2.53□□□□□ -2
YCS4YLR272C UBP14P38237 781 aaKnown RBP2.53□□□□□ -2
YCS4YLR272C YMR1P47147 688 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
YCS4YLR272C JIP5Q06214 492 aaPredicted RBP2.53□□□□□ -2
YCS4YLR272C PEP7P32609 515 aa2.52□□□□□ -2.01
YCS4YLR272C SSA2P10592 639 aaKnown RBP2.51□□□□□ -2.01
YCS4YLR272C ABP1P15891 592 aaKnown RBP2.51□□□□□ -2.01
YCS4YLR272C SLY41P22215 453 aa2.51□□□□□ -2.01
YCS4YLR272C TUM1Q08686 304 aaKnown RBP2.51□□□□□ -2.01
YCS4YLR272C NPL4P33755 580 aa2.51□□□□□ -2.01
YCS4YLR272C RPP1BP10622 106 aaKnown RBP2.51□□□□□ -2.01
YCS4YLR272C YPR109WQ06104 294 aa2.51□□□□□ -2.01
YCS4YLR272C YBL029C-AQ3E756 94 aa2.51□□□□□ -2.01
YCS4YLR272C ECM23Q02710 187 aa2.5□□□□□ -2.01
YCS4YLR272C MMP1Q12372 583 aa2.5□□□□□ -2.01
YCS4YLR272C GCD11P32481 527 aaKnown RBP2.5□□□□□ -2.01
YCS4YLR272C UBX7P38349 436 aa2.5□□□□□ -2.01
YCS4YLR272C ITT1Q04638 464 aa2.5□□□□□ -2.01
YCS4YLR272C YJU3P28321 313 aa2.49□□□□□ -2.01
YCS4YLR272C ISF1P32488 338 aa2.49□□□□□ -2.01
YCS4YLR272C GRS1P38088 690 aaKnown RBP2.49□□□□□ -2.01
YCS4YLR272C CWC24P53769 259 aa2.49□□□□□ -2.01
YCS4YLR272C VPS29P38759 282 aa2.49□□□□□ -2.01
YCS4YLR272C ULI1P43604 169 aa2.49□□□□□ -2.01
YCS4YLR272C YML083CQ04526 418 aa2.48□□□□□ -2.01
YCS4YLR272C MAK21Q12176 1025 aaKnown RBP2.48□□□□□ -2.01
YCS4YLR272C GLN1P32288 370 aaKnown RBP2.48□□□□□ -2.01
YCS4YLR272C GEF1P37020 779 aa2.48□□□□□ -2.01
YCS4YLR272C DSF2P38213 736 aa2.48□□□□□ -2.01
YCS4YLR272C YAP5P40574 245 aa2.48□□□□□ -2.01
YCS4YLR272C TIF1P10081 395 aaKnown RBP2.47□□□□□ -2.01
YCS4YLR272C YRR1Q12172 810 aa2.47□□□□□ -2.01
YCS4YLR272C SAP30P38429 201 aa2.47□□□□□ -2.01
YCS4YLR272C UBP10P53874 792 aaPredicted RBP2.47□□□□□ -2.01
YCS4YLR272C CDC3P32457 520 aaKnown RBP2.46□□□□□ -2.02
YCS4YLR272C YDJ1P25491 409 aaKnown RBP2.46□□□□□ -2.02
YCS4YLR272C SUB2Q07478 446 aaKnown RBP2.45□□□□□ -2.02
YCS4YLR272C VMA1P17255 1071 aaKnown RBP2.45□□□□□ -2.02
YCS4YLR272C RAD59Q12223 238 aa2.45□□□□□ -2.02
YCS4YLR272C MRX12P47084 519 aa2.45□□□□□ -2.02
YCS4YLR272C KAR5Q04746 504 aa2.45□□□□□ -2.02
YCS4YLR272C CDC73Q06697 393 aa2.45□□□□□ -2.02
YCS4YLR272C YLR326WQ06170 240 aaKnown RBP2.44□□□□□ -2.02
YCS4YLR272C FOX2Q02207 900 aaKnown RBP2.43□□□□□ -2.02
YCS4YLR272C NUP42P49686 430 aaKnown RBP2.43□□□□□ -2.02
YCS4YLR272C BIO2P32451 375 aa2.43□□□□□ -2.02
YCS4YLR272C PPG1P32838 368 aa2.43□□□□□ -2.02
YCS4YLR272C ENO1P00924 437 aaKnown RBP2.42□□□□□ -2.02
YCS4YLR272C HTA1P04911 132 aaKnown RBP2.42□□□□□ -2.02
YCS4YLR272C HTA2P04912 132 aa2.42□□□□□ -2.02
YCS4YLR272C KEX1P09620 729 aa2.42□□□□□ -2.02
YCS4YLR272C KEX2P13134 814 aa2.42□□□□□ -2.02
YCS4YLR272C GUT1P32190 709 aa2.42□□□□□ -2.02
YCS4YLR272C YCK3P39962 524 aa2.42□□□□□ -2.02
YCS4YLR272C AIM7Q12156 149 aa2.42□□□□□ -2.02
YCS4YLR272C COX6P00427 148 aa2.42□□□□□ -2.02
YCS4YLR272C DAT1P13483 248 aaKnown RBP2.42□□□□□ -2.02
YCS4YLR272C FPK1P53739 893 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms