RNA–Protein interactions for RNA: YLR192C

HCR1, Transcript of eIF3j component of translation initiation factor 3 (eIF3), yeastyeast

Gene HCR1, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCR1YLR192C SET4P42948 560 aa10.01□□□□□ -0.81
HCR1YLR192C GYP5Q12344 894 aa9.98□□□□□ -0.81
HCR1YLR192C NOP53Q12080 455 aaKnown RBP9.97□□□□□ -0.81
HCR1YLR192C SPP1Q03012 353 aa9.96□□□□□ -0.82
HCR1YLR192C MSB4Q12317 492 aa9.96□□□□□ -0.82
HCR1YLR192C TIF11P38912 153 aaKnown RBP9.94□□□□□ -0.82
HCR1YLR192C GRE2Q12068 342 aaKnown RBP9.93□□□□□ -0.82
HCR1YLR192C BNI1P41832 1953 aa9.92□□□□□ -0.82
HCR1YLR192C DCW1P36091 449 aa9.9□□□□□ -0.82
HCR1YLR192C ATH1P48016 1211 aa9.9□□□□□ -0.82
HCR1YLR192C ULI1P43604 169 aa9.89□□□□□ -0.83
HCR1YLR192C MYO2P19524 1574 aaKnown RBP9.88□□□□□ -0.83
HCR1YLR192C GUT1P32190 709 aa9.88□□□□□ -0.83
HCR1YLR192C YPR148CQ06523 435 aa9.88□□□□□ -0.83
HCR1YLR192C SAS10Q12136 610 aaPredicted RBP9.88□□□□□ -0.83
HCR1YLR192C TRP5P00931 707 aaKnown RBP9.87□□□□□ -0.83
HCR1YLR192C IOC2Q12072 812 aa9.87□□□□□ -0.83
HCR1YLR192C LTE1P07866 1435 aa9.86□□□□□ -0.83
HCR1YLR192C EAP1P36041 632 aaKnown RBP9.86□□□□□ -0.83
HCR1YLR192C HIR3P47171 1648 aa9.85□□□□□ -0.83
HCR1YLR192C YCF1P39109 1515 aaKnown RBP9.85□□□□□ -0.83
HCR1YLR192C HTA1P04911 132 aaKnown RBP9.83□□□□□ -0.84
HCR1YLR192C HTA2P04912 132 aa9.83□□□□□ -0.84
HCR1YLR192C SOL3P38858 249 aa9.83□□□□□ -0.84
HCR1YLR192C IFH1P39520 1085 aa9.83□□□□□ -0.84
HCR1YLR192C VPS70P47161 811 aa9.82□□□□□ -0.84
HCR1YLR192C DNF1P32660 1571 aa9.8□□□□□ -0.84
HCR1YLR192C TAF2P23255 1407 aa9.8□□□□□ -0.84
HCR1YLR192C NST1P53935 1240 aa9.79□□□□□ -0.84
HCR1YLR192C LDB19Q12502 818 aa9.78□□□□□ -0.84
HCR1YLR192C SIS1P25294 352 aaKnown RBP9.77□□□□□ -0.85
HCR1YLR192C IRC20Q06554 1556 aa9.76□□□□□ -0.85
HCR1YLR192C ITT1Q04638 464 aa9.76□□□□□ -0.85
HCR1YLR192C YEL023CP39992 682 aa9.75□□□□□ -0.85
HCR1YLR192C YGR273CP53329 174 aa9.74□□□□□ -0.85
HCR1YLR192C MET5P47169 1442 aa9.73□□□□□ -0.85
HCR1YLR192C CDC25P04821 1589 aa9.73□□□□□ -0.85
HCR1YLR192C RPA190P10964 1664 aaKnown RBP9.71□□□□□ -0.85
HCR1YLR192C PTC4P38089 393 aa9.71□□□□□ -0.86
HCR1YLR192C DAN4P47179 1161 aa9.71□□□□□ -0.86
HCR1YLR192C YNL035CP53962 389 aaKnown RBP9.71□□□□□ -0.86
HCR1YLR192C RTG1P32607 177 aa9.7□□□□□ -0.86
HCR1YLR192C JIP4Q03361 876 aa9.7□□□□□ -0.86
HCR1YLR192C SSN2P38931 1420 aa9.69□□□□□ -0.86
HCR1YLR192C UBP14P38237 781 aaKnown RBP9.68□□□□□ -0.86
HCR1YLR192C ILV3P39522 585 aaKnown RBP9.68□□□□□ -0.86
HCR1YLR192C FKH1P40466 484 aa9.68□□□□□ -0.86
HCR1YLR192C MMS1Q06211 1407 aa9.67□□□□□ -0.86
HCR1YLR192C MPH3P0CE00 602 aa9.66□□□□□ -0.86
HCR1YLR192C VHR2P40041 505 aa9.66□□□□□ -0.86
HCR1YLR192C REF2P42073 533 aaPredicted RBP9.66□□□□□ -0.86
HCR1YLR192C CKB1P43639 278 aa9.66□□□□□ -0.86
HCR1YLR192C YLR326WQ06170 240 aaKnown RBP9.65□□□□□ -0.86
HCR1YLR192C AIR2Q12476 344 aaKnown RBP9.65□□□□□ -0.86
HCR1YLR192C AI4P03878 556 aa9.64□□□□□ -0.87
HCR1YLR192C SEC61P32915 480 aa9.63□□□□□ -0.87
HCR1YLR192C KEX1P09620 729 aa9.62□□□□□ -0.87
HCR1YLR192C NCR1Q12200 1170 aa9.61□□□□□ -0.87
HCR1YLR192C GEA2P39993 1459 aaKnown RBP9.6□□□□□ -0.87
HCR1YLR192C ATG2P53855 1592 aa9.6□□□□□ -0.87
HCR1YLR192C YDR090CQ03193 310 aa9.6□□□□□ -0.87
HCR1YLR192C PBS2P08018 668 aa9.57□□□□□ -0.88
HCR1YLR192C SSK2P53599 1579 aa9.57□□□□□ -0.88
HCR1YLR192C RPO31P04051 1460 aa9.55□□□□□ -0.88
HCR1YLR192C PCS60P38137 543 aaKnown RBP RIP-Chip data9.55□□□□□ -0.88not detected
HCR1YLR192C PML39Q03760 334 aa9.55□□□□□ -0.88
HCR1YLR192C ESC1Q03661 1658 aaKnown RBP9.55□□□□□ -0.88
HCR1YLR192C SPB4P25808 606 aaPredicted RBP9.52□□□□□ -0.89
HCR1YLR192C RAD54P32863 898 aa9.52□□□□□ -0.89
HCR1YLR192C SLI15P38283 698 aa9.52□□□□□ -0.89
HCR1YLR192C MID1P41821 548 aa9.52□□□□□ -0.89
HCR1YLR192C COX6P00427 148 aa9.51□□□□□ -0.89
HCR1YLR192C TFG1P41895 735 aaPredicted RBP9.51□□□□□ -0.89
HCR1YLR192C DSF2P38213 736 aa9.5□□□□□ -0.89
HCR1YLR192C YDL129WQ07555 291 aa9.5□□□□□ -0.89
HCR1YLR192C MAK21Q12176 1025 aaKnown RBP9.49□□□□□ -0.89
HCR1YLR192C SAP30P38429 201 aa9.46□□□□□ -0.9
HCR1YLR192C YJL171CP46992 396 aa9.45□□□□□ -0.9
HCR1YLR192C KIC1P38692 1080 aa9.44□□□□□ -0.9
HCR1YLR192C BMT6Q12291 365 aa9.44□□□□□ -0.9
HCR1YLR192C YDR344CQ05510 147 aa9.42□□□□□ -0.9
HCR1YLR192C MAM3Q12296 706 aa9.42□□□□□ -0.9
HCR1YLR192C CDC73Q06697 393 aa9.41□□□□□ -0.9
HCR1YLR192C XRN1P22147 1528 aaKnown RBP9.41□□□□□ -0.9
HCR1YLR192C IES2P40154 320 aa9.4□□□□□ -0.9
HCR1YLR192C MPC54Q08550 464 aa9.4□□□□□ -0.9
HCR1YLR192C PEX29Q03370 554 aa9.39□□□□□ -0.91
HCR1YLR192C NUP42P49686 430 aaKnown RBP9.37□□□□□ -0.91
HCR1YLR192C YOR093CQ12275 1648 aa9.37□□□□□ -0.91
HCR1YLR192C DNF2Q12675 1612 aa9.37□□□□□ -0.91
HCR1YLR192C RKR1Q04781 1562 aa9.37□□□□□ -0.91
HCR1YLR192C ORC6P38826 435 aa9.36□□□□□ -0.91
HCR1YLR192C DPL1Q05567 589 aa9.36□□□□□ -0.91
HCR1YLR192C LEU3P08638 886 aa9.35□□□□□ -0.91
HCR1YLR192C DRS2P39524 1355 aa9.34□□□□□ -0.91
HCR1YLR192C DIT2P21595 489 aa9.33□□□□□ -0.92
HCR1YLR192C GAP1P19145 602 aaPredicted RBP9.32□□□□□ -0.92
HCR1YLR192C NMA111P53920 997 aa9.32□□□□□ -0.92
HCR1YLR192C ARH1P48360 493 aa9.31□□□□□ -0.92
HCR1YLR192C SKI3P17883 1432 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms