RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W PEX29Q03370 554 aa4.3□□□□□ -1.72
SLX4YLR135W DBP1P24784 617 aaKnown RBP4.29□□□□□ -1.72
SLX4YLR135W DCW1P36091 449 aa4.27□□□□□ -1.73
SLX4YLR135W PML39Q03760 334 aa4.27□□□□□ -1.73
SLX4YLR135W MRM1P25270 412 aa4.24□□□□□ -1.73
SLX4YLR135W YFR006WP43590 535 aa4.23□□□□□ -1.73
SLX4YLR135W YDR344CQ05510 147 aa4.23□□□□□ -1.73
SLX4YLR135W RAS1P01119 309 aa4.21□□□□□ -1.74
SLX4YLR135W GAR1P28007 205 aaKnown RBP4.21□□□□□ -1.74
SLX4YLR135W PTC2P39966 464 aaKnown RBP4.2□□□□□ -1.74
SLX4YLR135W YAH1Q12184 172 aaKnown RBP4.18□□□□□ -1.74
SLX4YLR135W YML082WQ04533 649 aaKnown RBP4.17□□□□□ -1.74
SLX4YLR135W GCR2Q01722 534 aa4.15□□□□□ -1.75
SLX4YLR135W HAP5Q02516 242 aa4.15□□□□□ -1.75
SLX4YLR135W BNI4P53858 892 aa4.14□□□□□ -1.75
SLX4YLR135W AMS1P22855 1083 aa4.14□□□□□ -1.75
SLX4YLR135W STS1P38637 319 aa4.1□□□□□ -1.75
SLX4YLR135W RTG3P38165 486 aa4.1□□□□□ -1.75
SLX4YLR135W VPS29P38759 282 aa4.1□□□□□ -1.75
SLX4YLR135W MTC5Q03897 1148 aa4.1□□□□□ -1.75
SLX4YLR135W PSD2P53037 1138 aaKnown RBP4.08□□□□□ -1.76
SLX4YLR135W BRE2P43132 505 aa4.07□□□□□ -1.76
SLX4YLR135W MID1P41821 548 aa4.06□□□□□ -1.76
SLX4YLR135W GYP1Q08484 637 aa4.05□□□□□ -1.76
SLX4YLR135W YEL077CQ3E7X8 1277 aa4.04□□□□□ -1.76
SLX4YLR135W GRE2Q12068 342 aaKnown RBP4.02□□□□□ -1.77
SLX4YLR135W SAS4Q04003 481 aa3.95□□□□□ -1.78
SLX4YLR135W ATH1P48016 1211 aa3.94□□□□□ -1.78
SLX4YLR135W YLR271WQ06152 274 aa3.94□□□□□ -1.78
SLX4YLR135W MRF1P30775 413 aaPredicted RBP3.92□□□□□ -1.78
SLX4YLR135W GUT1P32190 709 aa3.9□□□□□ -1.79
SLX4YLR135W BFR2Q06631 534 aaKnown RBP3.89□□□□□ -1.79
SLX4YLR135W ENV9Q08651 330 aa3.89□□□□□ -1.79
SLX4YLR135W NMA111P53920 997 aa3.89□□□□□ -1.79
SLX4YLR135W MPC54Q08550 464 aa3.87□□□□□ -1.79
SLX4YLR135W AI4P03878 556 aa3.87□□□□□ -1.79
SLX4YLR135W MET22P32179 357 aa3.87□□□□□ -1.79
SLX4YLR135W MPH3P0CE00 602 aa3.86□□□□□ -1.79
SLX4YLR135W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SLX4YLR135W YDR444WQ04093 687 aa3.83□□□□□ -1.8
SLX4YLR135W YPR015CQ12531 247 aa3.81□□□□□ -1.8
SLX4YLR135W DPL1Q05567 589 aa3.8□□□□□ -1.8
SLX4YLR135W ERG12P07277 443 aa3.79□□□□□ -1.8
SLX4YLR135W ISU2Q12056 156 aa3.76□□□□□ -1.81
SLX4YLR135W SDH2P21801 266 aa3.76□□□□□ -1.81
SLX4YLR135W NST1P53935 1240 aa3.75□□□□□ -1.81
SLX4YLR135W RAM1P22007 431 aa3.75□□□□□ -1.81
SLX4YLR135W MIF2P35201 549 aa3.75□□□□□ -1.81
SLX4YLR135W AIR1P40507 360 aaKnown RBP3.75□□□□□ -1.81
SLX4YLR135W CDC4P07834 779 aa3.73□□□□□ -1.81
SLX4YLR135W LCB5Q06147 687 aaKnown RBP3.73□□□□□ -1.81
SLX4YLR135W RCR1P38212 213 aa3.72□□□□□ -1.81
SLX4YLR135W NRD1P53617 575 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
SLX4YLR135W PTC3P34221 468 aaKnown RBP3.72□□□□□ -1.81
SLX4YLR135W YDL176WQ12027 708 aa3.71□□□□□ -1.82
SLX4YLR135W CST9Q06032 482 aa3.7□□□□□ -1.82
SLX4YLR135W MGA2P40578 1113 aa3.69□□□□□ -1.82
SLX4YLR135W TRK2P28584 889 aa3.68□□□□□ -1.82
SLX4YLR135W SOL3P38858 249 aa3.68□□□□□ -1.82
SLX4YLR135W ILV3P39522 585 aaKnown RBP3.67□□□□□ -1.82
SLX4YLR135W PUS1Q12211 544 aaKnown RBP3.67□□□□□ -1.82
SLX4YLR135W SLI15P38283 698 aa3.64□□□□□ -1.83
SLX4YLR135W LSB3P43603 459 aaKnown RBP3.64□□□□□ -1.83
SLX4YLR135W CLA4P48562 842 aa3.63□□□□□ -1.83
SLX4YLR135W YGR035CP53222 116 aa3.63□□□□□ -1.83
SLX4YLR135W PRT1P06103 763 aaKnown RBP3.62□□□□□ -1.83
SLX4YLR135W ICP55P40051 511 aa3.6□□□□□ -1.83
SLX4YLR135W PDR1P12383 1068 aa3.59□□□□□ -1.83
SLX4YLR135W CST6P40535 587 aa3.59□□□□□ -1.83
SLX4YLR135W YGR273CP53329 174 aa3.59□□□□□ -1.83
SLX4YLR135W RPP1BP10622 106 aaKnown RBP3.59□□□□□ -1.84
SLX4YLR135W SSP1P38871 571 aa3.58□□□□□ -1.84
SLX4YLR135W HST3P53687 447 aa3.58□□□□□ -1.84
SLX4YLR135W YPR204WQ08995 1032 aa3.58□□□□□ -1.84
SLX4YLR135W EDS1P38073 919 aa3.58□□□□□ -1.84
SLX4YLR135W FRK1Q03002 865 aaPredicted RBP3.58□□□□□ -1.84
SLX4YLR135W LAM6Q08001 693 aa3.58□□□□□ -1.84
SLX4YLR135W CAF120P53836 1060 aa3.57□□□□□ -1.84
SLX4YLR135W SPT16P32558 1035 aaKnown RBP3.56□□□□□ -1.84
SLX4YLR135W RRD1P40454 393 aaKnown RBP3.56□□□□□ -1.84
SLX4YLR135W HED1Q03937 162 aa3.56□□□□□ -1.84
SLX4YLR135W MAK11P20484 414 aaKnown RBP3.55□□□□□ -1.84
SLX4YLR135W TFA1P36100 482 aa3.54□□□□□ -1.84
SLX4YLR135W ASH1P34233 588 aa3.53□□□□□ -1.84
SLX4YLR135W PHM7Q12252 991 aa3.52□□□□□ -1.85
SLX4YLR135W BUD20Q08004 166 aaPredicted RBP3.51□□□□□ -1.85
SLX4YLR135W ACO2P39533 789 aa3.51□□□□□ -1.85
SLX4YLR135W AFT1P22149 690 aa3.5□□□□□ -1.85
SLX4YLR135W YLR346CQ06139 101 aa3.5□□□□□ -1.85
SLX4YLR135W CDC73Q06697 393 aa3.5□□□□□ -1.85
SLX4YLR135W PAT1P25644 796 aaKnown RBP3.48□□□□□ -1.85
SLX4YLR135W COQ8P27697 501 aa3.48□□□□□ -1.85
SLX4YLR135W NPL4P33755 580 aa3.48□□□□□ -1.85
SLX4YLR135W SBP1P10080 294 aaKnown RBP3.47□□□□□ -1.85
SLX4YLR135W BDP1P46678 594 aa3.46□□□□□ -1.86
SLX4YLR135W HPF1Q05164 967 aa3.45□□□□□ -1.86
SLX4YLR135W PEX21P50091 288 aa3.44□□□□□ -1.86
SLX4YLR135W NOP53Q12080 455 aaKnown RBP3.44□□□□□ -1.86
SLX4YLR135W YJR115WP47152 169 aa3.43□□□□□ -1.86
SLX4YLR135W KEX1P09620 729 aa3.4□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms